Wall clock time and date at job start Sun Mar 7 2021 02:31:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42902 * 109.47269 * 2 1 4 4 C 1.35900 * 117.00035 * 84.84322 * 3 2 1 5 5 C 1.38728 * 120.05273 * 354.62294 * 4 3 2 6 6 C 1.38151 * 119.94126 * 180.25613 * 5 4 3 7 7 C 1.38264 * 120.05167 * 359.46772 * 6 5 4 8 8 C 1.50709 * 119.93952 * 180.23154 * 7 6 5 9 9 O 1.42896 * 109.47231 * 245.27950 * 8 7 6 10 10 Si 1.86301 * 109.47115 * 5.28066 * 8 7 6 11 11 C 1.38257 * 120.11703 * 0.51273 * 7 6 5 12 12 C 1.38154 * 120.05425 * 359.76929 * 11 7 6 13 13 C 1.50705 * 109.46825 * 240.00535 * 2 1 3 14 14 O 1.21280 * 120.00315 * 120.00215 * 13 2 1 15 15 N 1.34773 * 119.99531 * 299.99328 * 13 2 1 16 16 C 1.46509 * 119.99726 * 180.02562 * 15 13 2 17 17 C 1.52999 * 109.46883 * 180.02562 * 16 15 13 18 18 C 1.52996 * 109.47086 * 179.97438 * 17 16 15 19 19 H 1.08996 * 112.85338 * 314.66363 * 18 17 16 20 20 C 1.53780 * 113.61658 * 85.85977 * 18 17 16 21 21 C 1.53954 * 87.02360 * 139.95457 * 20 18 17 22 22 H 1.09000 * 113.66633 * 220.07146 * 21 20 18 23 23 F 1.39901 * 113.61501 * 89.19923 * 21 20 18 24 24 C 1.53781 * 87.10911 * 334.63872 * 21 20 18 25 25 H 1.09003 * 109.46777 * 180.02562 * 1 2 3 26 26 H 1.09004 * 109.46703 * 299.99773 * 1 2 3 27 27 H 1.08999 * 109.47398 * 59.99834 * 1 2 3 28 28 H 1.08999 * 109.47398 * 120.00166 * 2 1 3 29 29 H 1.07995 * 120.03284 * 359.97438 * 5 4 3 30 30 H 1.07995 * 119.96928 * 179.72587 * 6 5 4 31 31 H 1.09000 * 109.46590 * 125.28123 * 8 7 6 32 32 H 0.96699 * 114.00371 * 59.99807 * 9 8 7 33 33 H 1.48505 * 110.00062 * 58.67942 * 10 8 7 34 34 H 1.48502 * 109.99736 * 179.97438 * 10 8 7 35 35 H 1.07998 * 119.97537 * 179.74095 * 11 7 6 36 36 H 1.07996 * 120.02876 * 179.97438 * 12 11 7 37 37 H 0.97001 * 120.00527 * 359.97438 * 15 13 2 38 38 H 1.09004 * 109.46613 * 299.99808 * 16 15 13 39 39 H 1.08991 * 109.47342 * 60.00219 * 16 15 13 40 40 H 1.09008 * 109.47127 * 299.99847 * 17 16 15 41 41 H 1.08997 * 109.48019 * 59.99580 * 17 16 15 42 42 H 1.09002 * 113.61880 * 254.53148 * 20 18 17 43 43 H 1.09006 * 113.61760 * 25.43118 * 20 18 17 44 44 H 1.09007 * 113.61240 * 270.81290 * 24 21 20 45 45 H 1.08996 * 113.69561 * 139.92066 * 24 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 2.1094 1.9653 1.2060 5 6 1.6554 1.3305 2.3529 6 6 1.7565 1.9630 3.5770 7 6 2.3196 3.2230 3.6609 8 6 2.4334 3.9085 4.9982 9 8 1.6066 5.0740 5.0079 10 14 1.8799 2.7433 6.3424 11 6 2.7733 3.8575 2.5194 12 6 2.6692 3.2317 1.2921 13 6 2.0323 -0.7103 -1.2306 14 8 2.7295 -0.1209 -2.0289 15 7 1.7067 -2.0006 -1.4438 16 6 2.1954 -2.6914 -2.6398 17 6 1.6849 -4.1337 -2.6402 18 6 2.1947 -4.8549 -3.8894 19 1 2.0856 -4.2596 -4.7960 20 6 3.5952 -5.4668 -3.7191 21 6 3.0746 -6.6784 -4.5136 22 1 3.4217 -7.6368 -4.1273 23 9 3.2445 -6.5565 -5.8969 24 6 1.6669 -6.2925 -4.0295 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8901 27 1 -0.3634 0.5138 -0.8899 28 1 1.8934 -0.5138 0.8899 29 1 1.2191 0.3447 2.2884 30 1 1.3991 1.4712 4.4695 31 1 3.4701 4.1970 5.1715 32 1 0.6686 4.8921 4.8594 33 1 2.7114 1.5131 6.3223 34 1 1.9879 3.4073 7.6663 35 1 3.2089 4.8434 2.5870 36 1 3.0233 3.7279 0.4006 37 1 1.1494 -2.4722 -0.8051 38 1 1.8323 -2.1776 -3.5300 39 1 3.2853 -2.6915 -2.6395 40 1 2.0476 -4.6477 -1.7500 41 1 0.5949 -4.1334 -2.6406 42 1 4.3799 -4.9113 -4.2327 43 1 3.8475 -5.6988 -2.6844 44 1 1.3910 -6.7507 -3.0797 45 1 0.8960 -6.4023 -4.7921 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_10157680.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:31:52 Heat of formation + Delta-G solvation = -104.999579 kcal Electronic energy + Delta-G solvation = -26484.431440 eV Core-core repulsion = 22384.012099 eV Total energy + Delta-G solvation = -4100.419341 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.157 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -48.64161 -41.78196 -40.63550 -39.59827 -38.98124 -37.17204 -36.16584 -33.74124 -32.13126 -31.73145 -31.21142 -27.09968 -26.85862 -26.35216 -25.10658 -24.03132 -23.03047 -22.40174 -21.43046 -20.57286 -19.56272 -18.71187 -18.11062 -17.46399 -17.13650 -16.95752 -16.82368 -16.71993 -16.48250 -16.21198 -15.95264 -15.81537 -15.64040 -15.41640 -14.97126 -14.68499 -14.61052 -14.43689 -14.12245 -13.89000 -13.75609 -13.67291 -13.58100 -13.40663 -13.25462 -12.96712 -12.69962 -12.18931 -12.15382 -12.12394 -12.07042 -11.97802 -11.72409 -11.37057 -11.24444 -10.80581 -10.42464 -10.24293 -10.05768 -9.21860 -5.07395 0.27425 0.27982 1.28067 1.41413 1.49941 1.60371 1.95548 2.42845 2.64564 3.10391 3.15075 3.33869 3.41098 3.47550 3.49888 3.54756 3.64849 3.68164 3.68750 3.80552 3.85092 3.92076 4.07192 4.18482 4.23898 4.26560 4.38688 4.39347 4.46530 4.46922 4.50440 4.59186 4.62768 4.64524 4.74210 4.84623 4.85664 4.91261 4.93728 4.96137 5.14900 5.22616 5.24146 5.30730 5.49245 5.67223 6.19848 6.35274 6.57796 7.05429 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.066 3.934 3 O -0.283 6.283 4 C 0.136 3.864 5 C -0.209 4.209 6 C -0.074 4.074 7 C -0.158 4.158 8 C -0.063 4.063 9 O -0.541 6.541 10 Si 0.684 3.316 11 C -0.050 4.050 12 C -0.146 4.146 13 C 0.517 3.483 14 O -0.511 6.511 15 N -0.728 5.728 16 C 0.120 3.880 17 C -0.120 4.120 18 C -0.107 4.107 19 H 0.099 0.901 20 C -0.160 4.160 21 C 0.061 3.939 22 H 0.097 0.903 23 F -0.197 7.197 24 C -0.157 4.157 25 H 0.079 0.921 26 H 0.080 0.920 27 H 0.077 0.923 28 H 0.101 0.899 29 H 0.133 0.867 30 H 0.130 0.870 31 H 0.112 0.888 32 H 0.379 0.621 33 H -0.259 1.259 34 H -0.255 1.255 35 H 0.134 0.866 36 H 0.135 0.865 37 H 0.401 0.599 38 H 0.071 0.929 39 H 0.071 0.929 40 H 0.074 0.926 41 H 0.075 0.925 42 H 0.082 0.918 43 H 0.100 0.900 44 H 0.100 0.900 45 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.281 -5.551 3.569 8.452 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.006 3.994 3 O -0.196 6.196 4 C 0.090 3.910 5 C -0.227 4.227 6 C -0.092 4.092 7 C -0.158 4.158 8 C -0.174 4.174 9 O -0.346 6.346 10 Si 0.587 3.413 11 C -0.069 4.069 12 C -0.165 4.165 13 C 0.301 3.699 14 O -0.385 6.385 15 N -0.382 5.382 16 C -0.003 4.003 17 C -0.158 4.158 18 C -0.126 4.126 19 H 0.118 0.882 20 C -0.198 4.198 21 C 0.025 3.975 22 H 0.115 0.885 23 F -0.177 7.177 24 C -0.195 4.195 25 H 0.098 0.902 26 H 0.098 0.902 27 H 0.096 0.904 28 H 0.119 0.881 29 H 0.151 0.849 30 H 0.147 0.853 31 H 0.130 0.870 32 H 0.226 0.774 33 H -0.183 1.183 34 H -0.180 1.180 35 H 0.152 0.848 36 H 0.153 0.847 37 H 0.236 0.764 38 H 0.090 0.910 39 H 0.090 0.910 40 H 0.092 0.908 41 H 0.094 0.906 42 H 0.101 0.899 43 H 0.118 0.882 44 H 0.118 0.882 45 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -3.905 -5.174 3.578 7.404 hybrid contribution 0.163 -0.229 -0.066 0.289 sum -3.741 -5.403 3.513 7.452 Atomic orbital electron populations 1.22369 0.92258 1.03901 1.04990 1.22201 0.95945 0.83283 0.97988 1.86233 1.80893 1.25412 1.27041 1.19082 0.95087 0.92833 0.83964 1.21205 1.07340 1.01769 0.92409 1.20758 0.97381 0.94132 0.96888 1.20244 1.03521 0.95739 0.96343 1.24981 0.98311 0.94141 0.99994 1.86507 1.22096 1.30901 1.95107 0.94895 0.90880 0.77946 0.77623 1.20864 0.96140 0.99277 0.90571 1.20551 1.03242 0.93617 0.99048 1.20088 0.80731 0.81983 0.87078 1.90788 1.36157 1.65591 1.45932 1.45866 1.54504 1.11578 1.26246 1.21420 0.99845 0.91729 0.87351 1.21771 1.01597 0.94111 0.98317 1.22511 0.95811 0.95540 0.98756 0.88232 1.23720 0.97845 0.96694 1.01544 1.22415 0.98345 1.00151 0.76601 0.88547 1.92832 1.96224 1.97354 1.31335 1.23609 0.96681 0.96218 1.02977 0.90218 0.90159 0.90408 0.88138 0.84908 0.85313 0.87017 0.77416 1.18343 1.17990 0.84826 0.84660 0.76407 0.91033 0.91038 0.90769 0.90626 0.89924 0.88179 0.88167 0.89937 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.54 9.07 37.16 0.34 0.88 16 2 C 0.07 -0.04 2.65 -27.88 -0.07 -0.11 16 3 O -0.28 -0.80 9.33 -39.33 -0.37 -1.17 16 4 C 0.14 0.23 6.60 -39.22 -0.26 -0.03 16 5 C -0.21 0.11 8.24 -39.43 -0.32 -0.21 16 6 C -0.07 0.06 8.66 -39.60 -0.34 -0.28 16 7 C -0.16 -0.03 5.35 -104.60 -0.56 -0.59 16 8 C -0.06 0.01 2.80 36.01 0.10 0.12 16 9 O -0.54 -0.15 12.83 -35.23 -0.45 -0.60 16 10 Si 0.68 -0.87 29.80 -169.99 -5.07 -5.93 16 11 C -0.05 -0.05 9.68 -39.61 -0.38 -0.43 16 12 C -0.15 -0.26 9.99 -39.43 -0.39 -0.66 16 13 C 0.52 0.77 7.23 -10.98 -0.08 0.69 16 14 O -0.51 -3.41 16.50 -14.35 -0.24 -3.64 16 15 N -0.73 1.52 5.45 -60.29 -0.33 1.19 16 16 C 0.12 -0.20 5.67 -4.04 -0.02 -0.22 16 17 C -0.12 0.48 5.15 -26.73 -0.14 0.34 16 18 C -0.11 0.28 3.62 -89.81 -0.32 -0.04 16 19 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 20 C -0.16 0.37 7.54 -25.83 -0.19 0.18 16 21 C 0.06 -0.08 5.69 -25.83 -0.15 -0.23 16 22 H 0.10 -0.26 8.14 -51.93 -0.42 -0.69 16 23 F -0.20 -0.45 17.38 2.25 0.04 -0.41 16 24 C -0.16 0.44 7.54 -25.92 -0.20 0.24 16 25 H 0.08 -0.45 7.57 -51.93 -0.39 -0.84 16 26 H 0.08 -0.28 6.90 -51.93 -0.36 -0.64 16 27 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.10 -0.30 6.32 -51.93 -0.33 -0.62 16 29 H 0.13 -0.41 5.43 -52.49 -0.28 -0.70 16 30 H 0.13 -0.40 4.91 -52.49 -0.26 -0.66 16 31 H 0.11 0.03 7.96 -51.93 -0.41 -0.38 16 32 H 0.38 -1.37 8.70 45.56 0.40 -0.97 16 33 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 34 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 35 H 0.13 0.03 8.06 -52.49 -0.42 -0.40 16 36 H 0.14 0.20 8.06 -52.49 -0.42 -0.23 16 37 H 0.40 -2.17 7.89 -40.82 -0.32 -2.49 16 38 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 39 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 40 H 0.07 -0.36 7.88 -51.92 -0.41 -0.77 16 41 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 42 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 43 H 0.10 -0.37 7.92 -51.93 -0.41 -0.78 16 44 H 0.10 -0.43 8.10 -51.93 -0.42 -0.85 16 45 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 LS Contribution 371.79 15.07 5.60 5.60 Total: 0.00 -9.83 371.79 -10.44 -20.26 By element: Atomic # 1 Polarization: -8.31 SS G_CDS: -6.63 Total: -14.94 kcal Atomic # 6 Polarization: 2.64 SS G_CDS: -3.00 Total: -0.36 kcal Atomic # 7 Polarization: 1.52 SS G_CDS: -0.33 Total: 1.19 kcal Atomic # 8 Polarization: -4.36 SS G_CDS: -1.06 Total: -5.41 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: -5.07 Total: -5.93 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -9.83 -10.44 -20.26 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_10157680.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.738 kcal (2) G-P(sol) polarization free energy of solvation -9.825 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.563 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.436 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.262 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.000 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds