Wall clock time and date at job start Sun Mar 7 2021 02:31:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42902 * 109.47269 * 2 1 4 4 C 1.35900 * 117.00035 * 84.84322 * 3 2 1 5 5 C 1.38728 * 120.05273 * 354.62294 * 4 3 2 6 6 C 1.38151 * 119.94126 * 180.25613 * 5 4 3 7 7 C 1.38264 * 120.05167 * 359.46772 * 6 5 4 8 8 C 1.50709 * 119.93952 * 180.23154 * 7 6 5 9 9 O 1.42896 * 109.47231 * 245.27950 * 8 7 6 10 10 Si 1.86301 * 109.47115 * 5.28066 * 8 7 6 11 11 C 1.38257 * 120.11703 * 0.51273 * 7 6 5 12 12 C 1.38154 * 120.05425 * 359.76929 * 11 7 6 13 13 C 1.50705 * 109.46825 * 240.00535 * 2 1 3 14 14 O 1.21280 * 120.00315 * 120.00215 * 13 2 1 15 15 N 1.34773 * 119.99531 * 299.99328 * 13 2 1 16 16 C 1.46509 * 119.99726 * 180.02562 * 15 13 2 17 17 C 1.52999 * 109.46883 * 180.02562 * 16 15 13 18 18 C 1.52996 * 109.47086 * 179.97438 * 17 16 15 19 19 H 1.08996 * 112.85338 * 314.66363 * 18 17 16 20 20 C 1.53780 * 113.61658 * 85.85977 * 18 17 16 21 21 C 1.53954 * 87.02360 * 139.95457 * 20 18 17 22 22 H 1.09000 * 113.66633 * 220.07146 * 21 20 18 23 23 F 1.39901 * 113.61501 * 89.19923 * 21 20 18 24 24 C 1.53781 * 87.10911 * 334.63872 * 21 20 18 25 25 H 1.09003 * 109.46777 * 180.02562 * 1 2 3 26 26 H 1.09004 * 109.46703 * 299.99773 * 1 2 3 27 27 H 1.08999 * 109.47398 * 59.99834 * 1 2 3 28 28 H 1.08999 * 109.47398 * 120.00166 * 2 1 3 29 29 H 1.07995 * 120.03284 * 359.97438 * 5 4 3 30 30 H 1.07995 * 119.96928 * 179.72587 * 6 5 4 31 31 H 1.09000 * 109.46590 * 125.28123 * 8 7 6 32 32 H 0.96699 * 114.00371 * 59.99807 * 9 8 7 33 33 H 1.48505 * 110.00062 * 58.67942 * 10 8 7 34 34 H 1.48502 * 109.99736 * 179.97438 * 10 8 7 35 35 H 1.07998 * 119.97537 * 179.74095 * 11 7 6 36 36 H 1.07996 * 120.02876 * 179.97438 * 12 11 7 37 37 H 0.97001 * 120.00527 * 359.97438 * 15 13 2 38 38 H 1.09004 * 109.46613 * 299.99808 * 16 15 13 39 39 H 1.08991 * 109.47342 * 60.00219 * 16 15 13 40 40 H 1.09008 * 109.47127 * 299.99847 * 17 16 15 41 41 H 1.08997 * 109.48019 * 59.99580 * 17 16 15 42 42 H 1.09002 * 113.61880 * 254.53148 * 20 18 17 43 43 H 1.09006 * 113.61760 * 25.43118 * 20 18 17 44 44 H 1.09007 * 113.61240 * 270.81290 * 24 21 20 45 45 H 1.08996 * 113.69561 * 139.92066 * 24 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 2.1094 1.9653 1.2060 5 6 1.6554 1.3305 2.3529 6 6 1.7565 1.9630 3.5770 7 6 2.3196 3.2230 3.6609 8 6 2.4334 3.9085 4.9982 9 8 1.6066 5.0740 5.0079 10 14 1.8799 2.7433 6.3424 11 6 2.7733 3.8575 2.5194 12 6 2.6692 3.2317 1.2921 13 6 2.0323 -0.7103 -1.2306 14 8 2.7295 -0.1209 -2.0289 15 7 1.7067 -2.0006 -1.4438 16 6 2.1954 -2.6914 -2.6398 17 6 1.6849 -4.1337 -2.6402 18 6 2.1947 -4.8549 -3.8894 19 1 2.0856 -4.2596 -4.7960 20 6 3.5952 -5.4668 -3.7191 21 6 3.0746 -6.6784 -4.5136 22 1 3.4217 -7.6368 -4.1273 23 9 3.2445 -6.5565 -5.8969 24 6 1.6669 -6.2925 -4.0295 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8901 27 1 -0.3634 0.5138 -0.8899 28 1 1.8934 -0.5138 0.8899 29 1 1.2191 0.3447 2.2884 30 1 1.3991 1.4712 4.4695 31 1 3.4701 4.1970 5.1715 32 1 0.6686 4.8921 4.8594 33 1 2.7114 1.5131 6.3223 34 1 1.9879 3.4073 7.6663 35 1 3.2089 4.8434 2.5870 36 1 3.0233 3.7279 0.4006 37 1 1.1494 -2.4722 -0.8051 38 1 1.8323 -2.1776 -3.5300 39 1 3.2853 -2.6915 -2.6395 40 1 2.0476 -4.6477 -1.7500 41 1 0.5949 -4.1334 -2.6406 42 1 4.3799 -4.9113 -4.2327 43 1 3.8475 -5.6988 -2.6844 44 1 1.3910 -6.7507 -3.0797 45 1 0.8960 -6.4023 -4.7921 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_10157680.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:31:51 Heat of formation + Delta-G solvation = -104.366098 kcal Electronic energy + Delta-G solvation = -26484.403970 eV Core-core repulsion = 22384.012099 eV Total energy + Delta-G solvation = -4100.391871 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.157 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -48.67351 -41.79875 -40.66712 -39.45244 -38.98889 -37.15981 -36.20765 -33.65473 -32.09521 -31.69959 -31.08428 -26.92449 -26.74630 -26.28535 -24.99504 -24.00875 -22.87209 -22.40693 -21.42231 -20.41160 -19.53584 -18.69097 -18.09396 -17.40471 -17.07748 -16.93948 -16.80135 -16.64833 -16.41808 -16.16359 -15.94131 -15.79446 -15.62572 -15.39069 -14.94945 -14.65590 -14.55542 -14.42588 -14.09458 -13.81920 -13.63972 -13.58724 -13.47064 -13.21900 -13.10593 -12.88419 -12.53556 -12.18478 -12.09914 -12.05457 -11.95623 -11.81595 -11.69191 -11.21808 -11.12971 -10.84167 -10.39657 -10.24425 -10.05261 -9.23549 -4.98648 0.26089 0.28937 1.34624 1.38310 1.51624 1.66273 2.00159 2.49150 2.64326 3.28223 3.35026 3.45163 3.57176 3.61059 3.66118 3.72363 3.73746 3.83387 3.87151 3.88547 3.94300 4.11019 4.24442 4.28757 4.36254 4.43860 4.48935 4.59313 4.59686 4.65655 4.71718 4.73472 4.74902 4.82567 4.93668 4.95824 5.02770 5.10528 5.12537 5.18520 5.19406 5.24460 5.31328 5.48766 5.49931 5.69115 6.25578 6.44754 6.80690 7.08802 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.063 3.937 3 O -0.316 6.316 4 C 0.121 3.879 5 C -0.201 4.201 6 C -0.072 4.072 7 C -0.162 4.162 8 C -0.075 4.075 9 O -0.559 6.559 10 Si 0.784 3.216 11 C -0.061 4.061 12 C -0.168 4.168 13 C 0.511 3.489 14 O -0.576 6.576 15 N -0.705 5.705 16 C 0.119 3.881 17 C -0.106 4.106 18 C -0.110 4.110 19 H 0.079 0.921 20 C -0.158 4.158 21 C 0.042 3.958 22 H 0.113 0.887 23 F -0.223 7.223 24 C -0.146 4.146 25 H 0.113 0.887 26 H 0.091 0.909 27 H 0.057 0.943 28 H 0.130 0.870 29 H 0.165 0.835 30 H 0.158 0.842 31 H 0.101 0.899 32 H 0.395 0.605 33 H -0.282 1.282 34 H -0.304 1.304 35 H 0.132 0.868 36 H 0.124 0.876 37 H 0.422 0.578 38 H 0.051 0.949 39 H 0.055 0.945 40 H 0.096 0.904 41 H 0.090 0.910 42 H 0.064 0.936 43 H 0.121 0.879 44 H 0.125 0.875 45 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.089 -7.697 5.786 11.957 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.004 3.996 3 O -0.229 6.229 4 C 0.076 3.924 5 C -0.220 4.220 6 C -0.089 4.089 7 C -0.162 4.162 8 C -0.184 4.184 9 O -0.367 6.367 10 Si 0.690 3.310 11 C -0.079 4.079 12 C -0.187 4.187 13 C 0.297 3.703 14 O -0.455 6.455 15 N -0.360 5.360 16 C -0.005 4.005 17 C -0.143 4.143 18 C -0.129 4.129 19 H 0.098 0.902 20 C -0.196 4.196 21 C 0.006 3.994 22 H 0.130 0.870 23 F -0.204 7.204 24 C -0.184 4.184 25 H 0.131 0.869 26 H 0.110 0.890 27 H 0.076 0.924 28 H 0.148 0.852 29 H 0.182 0.818 30 H 0.175 0.825 31 H 0.119 0.881 32 H 0.245 0.755 33 H -0.209 1.209 34 H -0.232 1.232 35 H 0.149 0.851 36 H 0.142 0.858 37 H 0.260 0.740 38 H 0.070 0.930 39 H 0.073 0.927 40 H 0.114 0.886 41 H 0.109 0.891 42 H 0.083 0.917 43 H 0.139 0.861 44 H 0.144 0.856 45 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -5.761 -7.353 5.787 10.989 hybrid contribution 0.764 0.456 -0.757 1.168 sum -4.997 -6.897 5.031 9.892 Atomic orbital electron populations 1.22398 0.90092 1.05941 1.04551 1.22471 0.97441 0.82006 0.97685 1.86196 1.81514 1.27173 1.28032 1.19240 0.95763 0.92907 0.84498 1.21513 1.06256 1.02784 0.91407 1.21065 0.96430 0.93524 0.97859 1.20364 1.03506 0.96346 0.96001 1.25214 0.98077 0.94515 1.00597 1.86469 1.23558 1.31509 1.95154 0.93803 0.88936 0.74809 0.73449 1.20912 0.96705 0.99462 0.90803 1.20620 1.04474 0.94537 0.99080 1.20651 0.79800 0.82690 0.87156 1.90759 1.39272 1.67187 1.48248 1.45715 1.53569 1.10517 1.26203 1.21390 0.98999 0.93231 0.86848 1.21688 1.02359 0.91948 0.98310 1.22473 0.95864 0.95823 0.98761 0.90216 1.23764 0.97492 0.96043 1.02296 1.22796 0.99961 1.01374 0.75266 0.86963 1.92775 1.96469 1.97514 1.33612 1.23606 0.95365 0.95644 1.03774 0.86876 0.89029 0.92420 0.85243 0.81771 0.82539 0.88126 0.75503 1.20882 1.23233 0.85052 0.85821 0.73964 0.93019 0.92657 0.88590 0.89124 0.91666 0.86062 0.85634 0.90752 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.37 9.07 71.98 0.65 2.02 16 2 C 0.06 -0.12 2.65 29.85 0.08 -0.05 16 3 O -0.32 -2.13 9.33 -73.38 -0.68 -2.82 16 4 C 0.12 0.46 6.60 22.50 0.15 0.61 16 5 C -0.20 0.57 8.24 22.37 0.18 0.75 16 6 C -0.07 0.25 8.66 22.26 0.19 0.44 16 7 C -0.16 -0.02 5.35 -19.85 -0.11 -0.12 16 8 C -0.07 0.05 2.80 71.24 0.20 0.25 16 9 O -0.56 -0.27 12.83 -148.98 -1.91 -2.18 16 10 Si 0.78 -2.89 29.80 68.60 2.04 -0.85 16 11 C -0.06 -0.20 9.68 22.25 0.22 0.01 16 12 C -0.17 -0.94 9.99 22.37 0.22 -0.71 16 13 C 0.51 1.78 7.23 87.66 0.63 2.42 16 14 O -0.58 -9.17 16.50 16.01 0.26 -8.90 16 15 N -0.71 3.55 5.45 -463.05 -2.52 1.02 16 16 C 0.12 -0.35 5.67 86.38 0.49 0.14 16 17 C -0.11 1.01 5.15 30.59 0.16 1.17 16 18 C -0.11 0.59 3.62 -10.27 -0.04 0.56 16 19 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 20 C -0.16 0.73 7.54 31.18 0.24 0.97 16 21 C 0.04 -0.11 5.69 31.18 0.18 0.07 16 22 H 0.11 -0.70 8.14 -2.39 -0.02 -0.72 16 23 F -0.22 -1.33 17.38 44.97 0.78 -0.55 16 24 C -0.15 0.96 7.54 31.12 0.23 1.19 16 25 H 0.11 -1.69 7.57 -2.39 -0.02 -1.70 16 26 H 0.09 -0.89 6.90 -2.38 -0.02 -0.90 16 27 H 0.06 -0.18 8.14 -2.39 -0.02 -0.20 16 28 H 0.13 -1.09 6.32 -2.39 -0.02 -1.10 16 29 H 0.16 -1.63 5.43 -2.91 -0.02 -1.64 16 30 H 0.16 -1.49 4.91 -2.91 -0.01 -1.50 16 31 H 0.10 0.12 7.96 -2.39 -0.02 0.10 16 32 H 0.40 -3.12 8.70 -74.06 -0.64 -3.76 16 33 H -0.28 -0.10 7.11 99.48 0.71 0.61 16 34 H -0.30 -1.38 7.11 99.48 0.71 -0.67 16 35 H 0.13 0.34 8.06 -2.91 -0.02 0.31 16 36 H 0.12 0.80 8.06 -2.91 -0.02 0.77 16 37 H 0.42 -5.72 7.89 -92.71 -0.73 -6.46 16 38 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 39 H 0.05 0.04 8.14 -2.39 -0.02 0.02 16 40 H 0.10 -1.26 7.88 -2.38 -0.02 -1.28 16 41 H 0.09 -1.07 8.14 -2.39 -0.02 -1.09 16 42 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 43 H 0.12 -1.10 7.92 -2.38 -0.02 -1.12 16 44 H 0.13 -1.45 8.10 -2.38 -0.02 -1.47 16 45 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 Total: 0.00 -28.22 371.79 1.33 -26.89 By element: Atomic # 1 Polarization: -22.01 SS G_CDS: -0.32 Total: -22.33 kcal Atomic # 6 Polarization: 6.04 SS G_CDS: 3.68 Total: 9.72 kcal Atomic # 7 Polarization: 3.55 SS G_CDS: -2.52 Total: 1.02 kcal Atomic # 8 Polarization: -11.57 SS G_CDS: -2.33 Total: -13.90 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 0.78 Total: -0.55 kcal Atomic # 14 Polarization: -2.89 SS G_CDS: 2.04 Total: -0.85 kcal Total: -28.22 1.33 -26.89 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_10157680.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.473 kcal (2) G-P(sol) polarization free energy of solvation -28.224 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.697 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.331 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.893 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.366 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds