Wall clock time and date at job start Sun Mar 7 2021 02:31:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.35459 * 126.06096 * 244.68667 * 4 2 1 6 6 N 1.35540 * 108.86444 * 179.89245 * 5 4 2 7 7 C 1.37646 * 108.64532 * 0.37524 * 6 5 4 8 8 C 1.46681 * 126.23175 * 179.79042 * 7 6 5 9 9 O 1.21693 * 120.00077 * 179.97438 * 8 7 6 10 10 N 1.34775 * 119.99872 * 359.97438 * 8 7 6 11 11 C 1.46500 * 119.99868 * 179.97438 * 10 8 7 12 12 C 1.53005 * 109.47135 * 180.02562 * 11 10 8 13 13 C 1.52998 * 109.47067 * 180.02562 * 12 11 10 14 14 H 1.09002 * 112.85337 * 316.19910 * 13 12 11 15 15 C 1.53791 * 113.61480 * 87.50497 * 13 12 11 16 16 C 1.53780 * 87.07808 * 139.98117 * 15 13 12 17 17 H 1.09001 * 113.60851 * 220.01915 * 16 15 13 18 18 F 1.39896 * 113.69096 * 89.13158 * 16 15 13 19 19 C 1.53780 * 113.61300 * 185.00138 * 13 12 11 20 20 C 1.37868 * 107.53495 * 359.77144 * 7 6 5 21 21 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 22 22 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 23 23 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 24 24 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 25 25 H 1.07996 * 125.56753 * 0.03611 * 5 4 2 26 26 H 0.97003 * 125.67229 * 180.12534 * 6 5 4 27 27 H 0.96996 * 120.00285 * 0.02562 * 10 8 7 28 28 H 1.08997 * 109.47743 * 300.00540 * 11 10 8 29 29 H 1.09001 * 109.46776 * 60.00764 * 11 10 8 30 30 H 1.09001 * 109.46792 * 300.00460 * 12 11 10 31 31 H 1.09001 * 109.46738 * 60.00651 * 12 11 10 32 32 H 1.08997 * 113.60936 * 254.53077 * 15 13 12 33 33 H 1.08993 * 113.60894 * 25.43133 * 15 13 12 34 34 H 1.08995 * 113.61529 * 334.56409 * 19 13 12 35 35 H 1.09005 * 113.61484 * 105.47337 * 19 13 12 36 36 H 1.08005 * 126.45818 * 180.02562 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 2.6385 -0.1512 2.2412 6 7 2.9066 -1.1035 3.1678 7 6 2.3694 -2.2967 2.7407 8 6 2.4375 -3.5803 3.4471 9 8 1.9196 -4.5695 2.9630 10 7 3.0736 -3.6643 4.6323 11 6 3.1411 -4.9463 5.3382 12 6 3.9118 -4.7675 6.6478 13 6 3.9829 -6.1064 7.3846 14 1 3.0333 -6.6415 7.3829 15 6 5.1823 -6.9751 6.9697 16 6 5.3274 -7.3454 8.4552 17 1 6.3622 -7.3917 8.7945 18 9 4.5821 -8.4685 8.8299 19 6 4.6335 -6.0108 8.7747 20 6 1.7554 -2.0654 1.5281 21 1 -0.3934 0.4418 -0.7650 22 1 1.7923 -0.5137 -0.8901 23 1 1.5616 2.4678 1.2086 24 1 3.5346 1.7703 -0.0322 25 1 2.9378 0.8847 2.3005 26 1 3.3985 -0.9675 3.9927 27 1 3.4860 -2.8758 5.0184 28 1 2.1316 -5.2949 5.5558 29 1 3.6516 -5.6788 4.7129 30 1 4.9214 -4.4186 6.4305 31 1 3.4010 -4.0351 7.2729 32 1 4.9116 -7.8180 6.3339 33 1 6.0223 -6.4012 6.5787 34 1 5.3237 -5.1734 8.8771 35 1 3.9199 -6.0754 9.5962 36 1 1.2360 -2.7934 0.9226 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_10543058.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:31:55 Heat of formation + Delta-G solvation = -52.446242 kcal Electronic energy + Delta-G solvation = -19691.321877 eV Core-core repulsion = 16285.739079 eV Total energy + Delta-G solvation = -3405.582797 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.121 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -48.70293 -42.60723 -40.49081 -39.37326 -37.58211 -36.31256 -33.03352 -32.01655 -30.65461 -27.03747 -26.76724 -25.86938 -23.91510 -22.88558 -21.40026 -20.82373 -20.39683 -19.81781 -18.27317 -17.53916 -17.11930 -17.07547 -16.92648 -16.56889 -16.09127 -15.67388 -15.59373 -15.12438 -15.02508 -14.96434 -14.48943 -14.40293 -14.11012 -13.83692 -13.53321 -13.44168 -13.15391 -12.62256 -12.47443 -12.04542 -11.93599 -11.86704 -11.52714 -11.22805 -11.01369 -10.41225 -10.29579 -9.98842 -9.44804 -4.86064 0.20262 1.30783 1.43509 1.77356 1.80804 1.98252 2.05479 2.13869 3.24474 3.30907 3.56158 3.58633 3.65841 3.71634 3.82343 3.88086 4.02541 4.06886 4.17706 4.21322 4.37794 4.53740 4.59421 4.68352 4.70008 4.77746 4.78664 4.86723 4.88230 4.98808 5.04284 5.12342 5.20074 5.43658 5.45520 5.58846 6.19608 6.37521 6.94037 7.01607 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.572 6.572 2 C -0.059 4.059 3 Si 0.788 3.212 4 C -0.189 4.189 5 C 0.034 3.966 6 N -0.514 5.514 7 C -0.064 4.064 8 C 0.588 3.412 9 O -0.573 6.573 10 N -0.713 5.713 11 C 0.119 3.881 12 C -0.107 4.107 13 C -0.110 4.110 14 H 0.082 0.918 15 C -0.157 4.157 16 C 0.044 3.956 17 H 0.113 0.887 18 F -0.222 7.222 19 C -0.148 4.148 20 C -0.103 4.103 21 H 0.400 0.600 22 H 0.078 0.922 23 H -0.288 1.288 24 H -0.282 1.282 25 H 0.191 0.809 26 H 0.437 0.563 27 H 0.412 0.588 28 H 0.055 0.945 29 H 0.061 0.939 30 H 0.094 0.906 31 H 0.086 0.914 32 H 0.067 0.933 33 H 0.121 0.879 34 H 0.124 0.876 35 H 0.074 0.926 36 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.081 7.939 0.721 9.453 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.381 6.381 2 C -0.168 4.168 3 Si 0.692 3.308 4 C -0.195 4.195 5 C -0.103 4.103 6 N -0.112 5.112 7 C -0.177 4.177 8 C 0.376 3.624 9 O -0.453 6.453 10 N -0.365 5.365 11 C -0.005 4.005 12 C -0.144 4.144 13 C -0.129 4.129 14 H 0.100 0.900 15 C -0.195 4.195 16 C 0.008 3.992 17 H 0.131 0.869 18 F -0.203 7.203 19 C -0.185 4.185 20 C -0.130 4.130 21 H 0.250 0.750 22 H 0.095 0.905 23 H -0.215 1.215 24 H -0.208 1.208 25 H 0.207 0.793 26 H 0.279 0.721 27 H 0.249 0.751 28 H 0.074 0.926 29 H 0.079 0.921 30 H 0.112 0.888 31 H 0.105 0.895 32 H 0.086 0.914 33 H 0.139 0.861 34 H 0.142 0.858 35 H 0.093 0.907 36 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 5.357 7.416 1.565 9.281 hybrid contribution 0.057 -0.737 0.646 0.982 sum 5.414 6.679 2.210 8.877 Atomic orbital electron populations 1.86465 1.18161 1.82499 1.50997 1.24419 0.85096 1.11544 0.95732 0.93789 0.77441 0.74160 0.85454 1.19239 1.07021 0.94051 0.99217 1.22037 1.03006 0.95141 0.90137 1.41766 1.43139 1.06490 1.19760 1.20234 1.11353 0.86651 0.99482 1.17176 0.78022 0.86248 0.80974 1.90853 1.48541 1.37791 1.68080 1.45722 1.56607 1.13694 1.20495 1.21447 1.00794 0.84559 0.93655 1.21697 1.01716 0.97415 0.93577 1.22475 0.98311 0.96170 0.95930 0.90001 1.23730 0.99939 1.00709 0.95108 1.22730 0.95768 0.82919 0.97797 0.86905 1.92776 1.79676 1.55169 1.92649 1.23615 1.00629 0.97052 0.97209 1.21295 1.00218 0.96369 0.95147 0.74990 0.90456 1.21496 1.20833 0.79272 0.72113 0.75114 0.92648 0.92079 0.88782 0.89507 0.91412 0.86125 0.85795 0.90749 0.84783 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.41 12.86 -148.98 -1.92 -3.32 16 2 C -0.06 -0.05 3.01 71.23 0.21 0.17 16 3 Si 0.79 -3.45 30.60 68.60 2.10 -1.35 16 4 C -0.19 -1.05 5.46 -20.12 -0.11 -1.16 16 5 C 0.03 0.02 10.45 83.48 0.87 0.89 16 6 N -0.51 0.95 5.99 -183.62 -1.10 -0.15 16 7 C -0.06 -0.38 7.06 40.35 0.28 -0.10 16 8 C 0.59 4.70 7.79 86.45 0.67 5.37 16 9 O -0.57 -10.10 16.88 -4.33 -0.07 -10.17 16 10 N -0.71 0.78 5.55 -467.07 -2.59 -1.81 16 11 C 0.12 -0.11 5.66 86.38 0.49 0.38 16 12 C -0.11 0.81 5.17 30.60 0.16 0.97 16 13 C -0.11 0.47 3.63 -10.26 -0.04 0.43 16 14 H 0.08 -0.05 8.13 -2.39 -0.02 -0.07 16 15 C -0.16 0.62 7.53 31.12 0.23 0.86 16 16 C 0.04 -0.09 5.69 31.12 0.18 0.09 16 17 H 0.11 -0.64 8.14 -2.39 -0.02 -0.66 16 18 F -0.22 -1.42 17.39 44.97 0.78 -0.64 16 19 C -0.15 0.81 7.54 31.12 0.23 1.05 16 20 C -0.10 -1.01 10.59 22.57 0.24 -0.77 16 21 H 0.40 -3.37 8.74 -74.05 -0.65 -4.02 16 22 H 0.08 -0.10 7.96 -2.38 -0.02 -0.12 16 23 H -0.29 -0.38 7.11 99.48 0.71 0.32 16 24 H -0.28 0.09 7.11 99.48 0.71 0.79 16 25 H 0.19 -0.82 6.20 -2.91 -0.02 -0.83 16 26 H 0.44 -4.59 8.19 -92.71 -0.76 -5.35 16 27 H 0.41 -3.66 7.60 -92.71 -0.70 -4.36 16 28 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 29 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 30 H 0.09 -1.04 7.84 -2.39 -0.02 -1.06 16 31 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 32 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 33 H 0.12 -0.99 7.89 -2.39 -0.02 -1.01 16 34 H 0.12 -1.27 8.10 -2.39 -0.02 -1.29 16 35 H 0.07 -0.26 8.14 -2.38 -0.02 -0.28 16 36 H 0.13 1.64 8.06 -2.91 -0.02 1.62 16 Total: 0.00 -25.93 310.62 -0.32 -26.26 By element: Atomic # 1 Polarization: -16.03 SS G_CDS: -0.95 Total: -16.98 kcal Atomic # 6 Polarization: 4.75 SS G_CDS: 3.43 Total: 8.18 kcal Atomic # 7 Polarization: 1.73 SS G_CDS: -3.69 Total: -1.96 kcal Atomic # 8 Polarization: -11.51 SS G_CDS: -1.99 Total: -13.50 kcal Atomic # 9 Polarization: -1.42 SS G_CDS: 0.78 Total: -0.64 kcal Atomic # 14 Polarization: -3.45 SS G_CDS: 2.10 Total: -1.35 kcal Total: -25.93 -0.32 -26.26 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_10543058.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.190 kcal (2) G-P(sol) polarization free energy of solvation -25.934 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.124 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.322 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.257 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.446 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds