Wall clock time and date at job start Sun Mar 7 2021 02:31:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.35539 * 125.67147 * 2 1 4 4 C 1.35456 * 108.86560 * 180.26603 * 3 2 1 5 5 C 1.50707 * 126.06485 * 179.74687 * 4 3 2 6 6 O 1.42906 * 109.46845 * 64.99972 * 5 4 3 7 7 Si 1.86298 * 109.46782 * 184.99862 * 5 4 3 8 8 C 1.39832 * 107.86566 * 359.76895 * 4 3 2 9 9 C 1.37642 * 125.68148 * 179.87103 * 2 1 3 10 10 C 1.46679 * 126.23557 * 0.02562 * 9 2 1 11 11 O 1.21699 * 119.99521 * 3.98826 * 10 9 2 12 12 N 1.34770 * 120.00319 * 183.99169 * 10 9 2 13 13 C 1.46506 * 120.00281 * 174.51611 * 12 10 9 14 14 C 1.52996 * 109.47109 * 179.72207 * 13 12 10 15 15 C 1.52999 * 109.46787 * 180.02562 * 14 13 12 16 16 H 1.09004 * 112.85414 * 43.79921 * 15 14 13 17 17 C 1.53784 * 113.61511 * 175.00189 * 15 14 13 18 18 C 1.53783 * 87.08140 * 139.97818 * 17 15 14 19 19 H 1.09004 * 113.61235 * 220.01933 * 18 17 15 20 20 F 1.39896 * 113.61578 * 89.20163 * 18 17 15 21 21 C 1.53785 * 87.08344 * 334.56526 * 18 17 15 22 22 H 1.08998 * 109.46954 * 264.45558 * 1 2 3 23 23 H 1.08993 * 109.47778 * 24.45887 * 1 2 3 24 24 H 1.08999 * 109.46830 * 144.46019 * 1 2 3 25 25 H 1.07997 * 125.56588 * 0.02562 * 3 2 1 26 26 H 1.08993 * 109.46860 * 305.00040 * 5 4 3 27 27 H 0.96699 * 114.00170 * 60.00091 * 6 5 4 28 28 H 1.48501 * 109.99674 * 179.97438 * 7 5 4 29 29 H 1.48493 * 110.00125 * 301.31700 * 7 5 4 30 30 H 1.08008 * 126.45382 * 180.02562 * 8 4 3 31 31 H 0.97000 * 119.99823 * 354.23242 * 12 10 9 32 32 H 1.09001 * 109.46644 * 299.72490 * 13 12 10 33 33 H 1.09003 * 109.46521 * 59.72124 * 13 12 10 34 34 H 1.09004 * 109.47113 * 299.99131 * 14 13 12 35 35 H 1.08995 * 109.47582 * 60.00159 * 14 13 12 36 36 H 1.09004 * 113.61027 * 254.52467 * 17 15 14 37 37 H 1.09000 * 113.61652 * 25.42868 * 17 15 14 38 38 H 1.09000 * 113.61207 * 270.88850 * 21 18 17 39 39 H 1.08993 * 113.61263 * 139.97930 * 21 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1011 0.0000 4 6 3.5521 0.7094 -0.0060 5 6 4.7536 1.6191 -0.0134 6 8 4.7958 2.3625 1.2064 7 14 6.3040 0.5986 -0.1727 8 6 3.5779 -0.6886 -0.0045 9 6 2.2678 -1.1180 0.0025 10 6 1.8126 -2.5124 0.0051 11 8 0.6242 -2.7645 -0.0681 12 7 2.7101 -3.5142 0.0887 13 6 2.2516 -4.9002 0.2124 14 6 3.4619 -5.8335 0.2815 15 6 2.9830 -7.2809 0.4101 16 1 2.1556 -7.5142 -0.2602 17 6 4.1222 -8.3130 0.3650 18 6 3.3721 -9.0725 1.4721 19 1 4.0275 -9.4876 2.2378 20 9 2.4474 -10.0028 0.9858 21 6 2.7447 -7.7241 1.8633 22 1 -0.3633 -0.0993 1.0229 23 1 -0.3634 0.9353 -0.4254 24 1 -0.3633 -0.8362 -0.5974 25 1 1.9080 2.1237 0.0004 26 1 4.6832 2.3071 -0.8559 27 1 4.8586 1.8132 1.9998 28 1 7.4961 1.4841 -0.1819 29 1 6.3955 -0.3654 0.9530 30 1 4.4584 -1.3142 -0.0077 31 1 3.6597 -3.3180 0.0628 32 1 1.6582 -5.0068 1.1205 33 1 1.6415 -5.1596 -0.6528 34 1 4.0552 -5.7269 -0.6267 35 1 4.0720 -5.5741 1.1466 36 1 4.1798 -8.8588 -0.5768 37 1 5.0852 -7.9146 0.6842 38 1 3.3313 -7.1647 2.5921 39 1 1.6905 -7.7944 2.1311 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_10803934.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:31:59 Heat of formation + Delta-G solvation = -48.132226 kcal Electronic energy + Delta-G solvation = -21835.667119 eV Core-core repulsion = 18274.733772 eV Total energy + Delta-G solvation = -3560.933347 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.137 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -48.62104 -42.54326 -40.30524 -39.39751 -37.81453 -36.16433 -34.05504 -32.30030 -30.37448 -28.50121 -27.02347 -26.27569 -25.59055 -23.58123 -22.82491 -21.13137 -20.74647 -20.46832 -19.07316 -17.51208 -17.34845 -17.04770 -16.95973 -16.77858 -16.51531 -16.37384 -15.88151 -15.74529 -15.39547 -15.22737 -14.98666 -14.64344 -14.39235 -13.92562 -13.82943 -13.74885 -13.65753 -13.28424 -13.16598 -13.15867 -12.65671 -12.28520 -12.13749 -11.93248 -11.79026 -11.33532 -11.23330 -10.92312 -10.50912 -10.18798 -9.77365 -9.23216 -4.90224 0.43753 1.35544 1.54349 1.56376 1.68042 2.02315 2.30112 2.34991 3.14007 3.18770 3.44944 3.48189 3.53786 3.65285 3.72968 3.81632 3.96190 4.00939 4.11712 4.17156 4.26219 4.29066 4.32282 4.43985 4.50337 4.62652 4.63703 4.66349 4.67818 4.73305 4.77944 4.87957 4.96222 5.00337 5.09691 5.32557 5.34366 5.65047 5.90046 6.12645 6.42141 6.51215 7.15000 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.407 5.407 3 C 0.050 3.950 4 C -0.208 4.208 5 C -0.041 4.041 6 O -0.535 6.535 7 Si 0.691 3.309 8 C -0.136 4.136 9 C -0.049 4.049 10 C 0.590 3.410 11 O -0.546 6.546 12 N -0.721 5.721 13 C 0.122 3.878 14 C -0.122 4.122 15 C -0.107 4.107 16 H 0.099 0.901 17 C -0.157 4.157 18 C 0.061 3.939 19 H 0.096 0.904 20 F -0.197 7.197 21 C -0.160 4.160 22 H 0.078 0.922 23 H 0.087 0.913 24 H 0.102 0.898 25 H 0.172 0.828 26 H 0.113 0.887 27 H 0.375 0.625 28 H -0.261 1.261 29 H -0.261 1.261 30 H 0.147 0.853 31 H 0.403 0.597 32 H 0.070 0.930 33 H 0.072 0.928 34 H 0.076 0.924 35 H 0.074 0.926 36 H 0.082 0.918 37 H 0.100 0.900 38 H 0.100 0.900 39 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.771 -0.368 -0.621 2.863 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.078 5.078 3 C -0.087 4.087 4 C -0.214 4.214 5 C -0.152 4.152 6 O -0.341 6.341 7 Si 0.592 3.408 8 C -0.162 4.162 9 C -0.162 4.162 10 C 0.378 3.622 11 O -0.425 6.425 12 N -0.373 5.373 13 C -0.001 4.001 14 C -0.159 4.159 15 C -0.126 4.126 16 H 0.118 0.882 17 C -0.195 4.195 18 C 0.025 3.975 19 H 0.114 0.886 20 F -0.178 7.178 21 C -0.198 4.198 22 H 0.096 0.904 23 H 0.105 0.895 24 H 0.121 0.879 25 H 0.190 0.810 26 H 0.130 0.870 27 H 0.222 0.778 28 H -0.186 1.186 29 H -0.185 1.185 30 H 0.164 0.836 31 H 0.238 0.762 32 H 0.088 0.912 33 H 0.090 0.910 34 H 0.095 0.905 35 H 0.093 0.907 36 H 0.101 0.899 37 H 0.119 0.881 38 H 0.118 0.882 39 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 2.192 -0.365 -0.710 2.333 hybrid contribution -0.082 0.323 1.118 1.166 sum 2.109 -0.042 0.407 2.148 Atomic orbital electron populations 1.22323 0.75575 1.05178 1.04470 1.43927 1.07084 1.04906 1.51919 1.21935 0.89893 0.91621 1.05209 1.19711 0.94484 0.93772 1.13466 1.24320 1.02727 0.98871 0.89240 1.86583 1.95498 1.36377 1.15623 0.95017 0.75734 0.80538 0.89509 1.21185 0.94588 0.94651 1.05812 1.19925 0.90113 0.87631 1.18549 1.16957 0.85589 0.83520 0.76166 1.90819 1.16245 1.84890 1.50507 1.45628 1.09847 1.06431 1.75359 1.21402 0.96962 0.79048 1.02697 1.21783 0.97322 0.93554 1.03268 1.22511 0.98999 0.93605 0.97435 0.88239 1.23616 0.98638 0.97384 0.99839 1.22381 0.90093 0.87630 0.97441 0.88587 1.92829 1.68109 1.67336 1.89501 1.23695 1.02966 0.95700 0.97434 0.90362 0.89478 0.87928 0.81032 0.86955 0.77796 1.18603 1.18536 0.83556 0.76183 0.91181 0.90991 0.90504 0.90739 0.89941 0.88131 0.88167 0.89995 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.02 10.47 59.85 0.63 0.60 16 2 N -0.41 -0.46 3.16 -120.24 -0.38 -0.84 16 3 C 0.05 0.02 11.28 -16.91 -0.19 -0.18 16 4 C -0.21 -0.02 5.40 -105.02 -0.57 -0.59 16 5 C -0.04 0.02 3.00 36.01 0.11 0.12 16 6 O -0.53 -0.60 12.88 -35.23 -0.45 -1.06 16 7 Si 0.69 -0.91 30.65 -169.99 -5.21 -6.12 16 8 C -0.14 0.03 8.84 -39.12 -0.35 -0.31 16 9 C -0.05 -0.07 6.89 -81.98 -0.56 -0.64 16 10 C 0.59 1.33 7.77 -12.86 -0.10 1.23 16 11 O -0.55 -2.94 14.79 5.19 0.08 -2.87 16 12 N -0.72 0.63 5.54 -61.62 -0.34 0.29 16 13 C 0.12 -0.15 5.67 -4.04 -0.02 -0.18 16 14 C -0.12 0.43 5.16 -26.73 -0.14 0.29 16 15 C -0.11 0.26 3.63 -89.80 -0.33 -0.07 16 16 H 0.10 -0.14 8.13 -51.93 -0.42 -0.57 16 17 C -0.16 0.40 7.54 -25.92 -0.20 0.20 16 18 C 0.06 -0.07 5.69 -25.92 -0.15 -0.22 16 19 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 20 F -0.20 -0.46 17.39 2.25 0.04 -0.42 16 21 C -0.16 0.35 7.53 -25.91 -0.20 0.15 16 22 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 23 H 0.09 -0.23 8.12 -51.93 -0.42 -0.66 16 24 H 0.10 0.11 6.56 -51.93 -0.34 -0.23 16 25 H 0.17 -0.26 8.06 -52.49 -0.42 -0.69 16 26 H 0.11 -0.12 7.96 -51.93 -0.41 -0.53 16 27 H 0.37 -0.55 8.70 45.56 0.40 -0.16 16 28 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 29 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 30 H 0.15 -0.41 5.79 -52.48 -0.30 -0.71 16 31 H 0.40 -1.38 7.37 -40.82 -0.30 -1.68 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 34 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 35 H 0.07 -0.32 7.84 -51.93 -0.41 -0.72 16 36 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 37 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16 38 H 0.10 -0.35 7.90 -51.93 -0.41 -0.76 16 39 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 LS Contribution 329.01 15.07 4.96 4.96 Total: 0.00 -7.85 329.01 -8.99 -16.84 By element: Atomic # 1 Polarization: -5.58 SS G_CDS: -5.62 Total: -11.21 kcal Atomic # 6 Polarization: 2.49 SS G_CDS: -2.06 Total: 0.43 kcal Atomic # 7 Polarization: 0.16 SS G_CDS: -0.72 Total: -0.56 kcal Atomic # 8 Polarization: -3.55 SS G_CDS: -0.38 Total: -3.92 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.21 Total: -6.12 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -7.85 -8.99 -16.84 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_10803934.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.290 kcal (2) G-P(sol) polarization free energy of solvation -7.849 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.138 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.994 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.843 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.132 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds