Wall clock time and date at job start Sun Mar 7 2021 02:31:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.35539 * 125.67147 * 2 1 4 4 C 1.35456 * 108.86560 * 180.26603 * 3 2 1 5 5 C 1.50707 * 126.06485 * 179.74687 * 4 3 2 6 6 O 1.42906 * 109.46845 * 64.99972 * 5 4 3 7 7 Si 1.86298 * 109.46782 * 184.99862 * 5 4 3 8 8 C 1.39832 * 107.86566 * 359.76895 * 4 3 2 9 9 C 1.37642 * 125.68148 * 179.87103 * 2 1 3 10 10 C 1.46679 * 126.23557 * 0.02562 * 9 2 1 11 11 O 1.21699 * 119.99521 * 3.98826 * 10 9 2 12 12 N 1.34770 * 120.00319 * 183.99169 * 10 9 2 13 13 C 1.46506 * 120.00281 * 174.51611 * 12 10 9 14 14 C 1.52996 * 109.47109 * 179.72207 * 13 12 10 15 15 C 1.52999 * 109.46787 * 180.02562 * 14 13 12 16 16 H 1.09004 * 112.85414 * 43.79921 * 15 14 13 17 17 C 1.53784 * 113.61511 * 175.00189 * 15 14 13 18 18 C 1.53783 * 87.08140 * 139.97818 * 17 15 14 19 19 H 1.09004 * 113.61235 * 220.01933 * 18 17 15 20 20 F 1.39896 * 113.61578 * 89.20163 * 18 17 15 21 21 C 1.53785 * 87.08344 * 334.56526 * 18 17 15 22 22 H 1.08998 * 109.46954 * 264.45558 * 1 2 3 23 23 H 1.08993 * 109.47778 * 24.45887 * 1 2 3 24 24 H 1.08999 * 109.46830 * 144.46019 * 1 2 3 25 25 H 1.07997 * 125.56588 * 0.02562 * 3 2 1 26 26 H 1.08993 * 109.46860 * 305.00040 * 5 4 3 27 27 H 0.96699 * 114.00170 * 60.00091 * 6 5 4 28 28 H 1.48501 * 109.99674 * 179.97438 * 7 5 4 29 29 H 1.48493 * 110.00125 * 301.31700 * 7 5 4 30 30 H 1.08008 * 126.45382 * 180.02562 * 8 4 3 31 31 H 0.97000 * 119.99823 * 354.23242 * 12 10 9 32 32 H 1.09001 * 109.46644 * 299.72490 * 13 12 10 33 33 H 1.09003 * 109.46521 * 59.72124 * 13 12 10 34 34 H 1.09004 * 109.47113 * 299.99131 * 14 13 12 35 35 H 1.08995 * 109.47582 * 60.00159 * 14 13 12 36 36 H 1.09004 * 113.61027 * 254.52467 * 17 15 14 37 37 H 1.09000 * 113.61652 * 25.42868 * 17 15 14 38 38 H 1.09000 * 113.61207 * 270.88850 * 21 18 17 39 39 H 1.08993 * 113.61263 * 139.97930 * 21 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1011 0.0000 4 6 3.5521 0.7094 -0.0060 5 6 4.7536 1.6191 -0.0134 6 8 4.7958 2.3625 1.2064 7 14 6.3040 0.5986 -0.1727 8 6 3.5779 -0.6886 -0.0045 9 6 2.2678 -1.1180 0.0025 10 6 1.8126 -2.5124 0.0051 11 8 0.6242 -2.7645 -0.0681 12 7 2.7101 -3.5142 0.0887 13 6 2.2516 -4.9002 0.2124 14 6 3.4619 -5.8335 0.2815 15 6 2.9830 -7.2809 0.4101 16 1 2.1556 -7.5142 -0.2602 17 6 4.1222 -8.3130 0.3650 18 6 3.3721 -9.0725 1.4721 19 1 4.0275 -9.4876 2.2378 20 9 2.4474 -10.0028 0.9858 21 6 2.7447 -7.7241 1.8633 22 1 -0.3633 -0.0993 1.0229 23 1 -0.3634 0.9353 -0.4254 24 1 -0.3633 -0.8362 -0.5974 25 1 1.9080 2.1237 0.0004 26 1 4.6832 2.3071 -0.8559 27 1 4.8586 1.8132 1.9998 28 1 7.4961 1.4841 -0.1819 29 1 6.3955 -0.3654 0.9530 30 1 4.4584 -1.3142 -0.0077 31 1 3.6597 -3.3180 0.0628 32 1 1.6582 -5.0068 1.1205 33 1 1.6415 -5.1596 -0.6528 34 1 4.0552 -5.7269 -0.6267 35 1 4.0720 -5.5741 1.1466 36 1 4.1798 -8.8588 -0.5768 37 1 5.0852 -7.9146 0.6842 38 1 3.3313 -7.1647 2.5921 39 1 1.6905 -7.7944 2.1311 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_10803934.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:31:59 Heat of formation + Delta-G solvation = -46.454726 kcal Electronic energy + Delta-G solvation = -21835.594377 eV Core-core repulsion = 18274.733772 eV Total energy + Delta-G solvation = -3560.860605 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.137 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -48.66052 -42.54539 -40.34783 -39.29197 -37.81812 -36.20601 -34.03289 -32.25082 -30.32446 -28.47461 -26.83720 -26.20997 -25.54420 -23.53982 -22.74065 -21.12341 -20.72018 -20.35910 -19.06631 -17.51338 -17.31513 -16.99342 -16.97603 -16.74524 -16.45929 -16.32965 -15.88301 -15.72250 -15.38900 -15.20522 -15.00055 -14.63216 -14.38977 -13.93225 -13.78532 -13.69829 -13.47333 -13.23868 -13.11141 -13.06634 -12.51709 -12.31633 -11.95190 -11.80444 -11.77999 -11.25097 -11.15482 -10.91867 -10.48605 -10.23588 -9.76423 -9.23809 -4.80028 0.39525 1.42634 1.57353 1.59510 1.74355 2.07603 2.26698 2.33281 3.30310 3.37120 3.56375 3.63033 3.64849 3.75781 3.88820 3.89511 4.05193 4.13871 4.21148 4.28390 4.31287 4.39486 4.46595 4.61652 4.66432 4.72735 4.74496 4.75689 4.77597 4.84521 4.95474 5.04506 5.11700 5.15624 5.21486 5.36199 5.51962 5.67945 5.91022 6.15150 6.46792 6.62456 7.11263 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.416 5.416 3 C 0.048 3.952 4 C -0.215 4.215 5 C -0.049 4.049 6 O -0.554 6.554 7 Si 0.772 3.228 8 C -0.124 4.124 9 C -0.075 4.075 10 C 0.583 3.417 11 O -0.588 6.588 12 N -0.706 5.706 13 C 0.123 3.877 14 C -0.108 4.108 15 C -0.108 4.108 16 H 0.082 0.918 17 C -0.148 4.148 18 C 0.043 3.957 19 H 0.112 0.888 20 F -0.222 7.222 21 C -0.158 4.158 22 H 0.076 0.924 23 H 0.110 0.890 24 H 0.083 0.917 25 H 0.187 0.813 26 H 0.118 0.882 27 H 0.384 0.616 28 H -0.310 1.310 29 H -0.276 1.276 30 H 0.172 0.828 31 H 0.418 0.582 32 H 0.058 0.942 33 H 0.055 0.945 34 H 0.089 0.911 35 H 0.092 0.908 36 H 0.074 0.926 37 H 0.124 0.876 38 H 0.120 0.880 39 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.318 0.053 -0.504 4.347 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.088 5.088 3 C -0.090 4.090 4 C -0.221 4.221 5 C -0.159 4.159 6 O -0.362 6.362 7 Si 0.678 3.322 8 C -0.150 4.150 9 C -0.188 4.188 10 C 0.372 3.628 11 O -0.470 6.470 12 N -0.358 5.358 13 C 0.000 4.000 14 C -0.146 4.146 15 C -0.127 4.127 16 H 0.101 0.899 17 C -0.185 4.185 18 C 0.007 3.993 19 H 0.129 0.871 20 F -0.203 7.203 21 C -0.195 4.195 22 H 0.095 0.905 23 H 0.129 0.871 24 H 0.102 0.898 25 H 0.204 0.796 26 H 0.136 0.864 27 H 0.233 0.767 28 H -0.239 1.239 29 H -0.202 1.202 30 H 0.189 0.811 31 H 0.255 0.745 32 H 0.076 0.924 33 H 0.074 0.926 34 H 0.108 0.892 35 H 0.111 0.889 36 H 0.093 0.907 37 H 0.142 0.858 38 H 0.138 0.862 39 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 3.749 0.033 -0.594 3.796 hybrid contribution -0.538 0.241 1.105 1.252 sum 3.211 0.275 0.511 3.263 Atomic orbital electron populations 1.22331 0.75260 1.05642 1.04220 1.44106 1.07535 1.05118 1.52087 1.22307 0.90130 0.92116 1.04405 1.19813 0.94581 0.93989 1.13693 1.24546 1.03179 0.99170 0.88989 1.86555 1.95612 1.37492 1.16525 0.94077 0.72124 0.78179 0.87844 1.21475 0.94672 0.94811 1.04054 1.20039 0.90968 0.87441 1.20352 1.17224 0.85365 0.84395 0.75772 1.90794 1.17968 1.85504 1.52727 1.45545 1.10279 1.06006 1.73935 1.21390 0.97929 0.79309 1.01388 1.21707 0.96291 0.91876 1.04723 1.22467 0.98787 0.94494 0.96965 0.89947 1.23616 0.99297 0.96628 0.98969 1.22740 0.90238 0.87720 0.98619 0.87064 1.92774 1.69203 1.68413 1.89908 1.23731 1.02383 0.95380 0.98029 0.90522 0.87112 0.89781 0.79551 0.86401 0.76706 1.23904 1.20165 0.81089 0.74474 0.92401 0.92609 0.89222 0.88918 0.90708 0.85816 0.86219 0.91467 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.01 10.47 127.77 1.34 1.35 16 2 N -0.42 -1.05 3.16 -534.33 -1.69 -2.74 16 3 C 0.05 0.00 11.28 83.48 0.94 0.94 16 4 C -0.21 0.17 5.40 -20.12 -0.11 0.06 16 5 C -0.05 0.09 3.00 71.24 0.21 0.30 16 6 O -0.55 -0.89 12.88 -148.98 -1.92 -2.81 16 7 Si 0.77 -2.88 30.65 68.60 2.10 -0.78 16 8 C -0.12 0.20 8.84 22.57 0.20 0.40 16 9 C -0.08 -0.23 6.89 40.35 0.28 0.05 16 10 C 0.58 3.11 7.77 86.45 0.67 3.78 16 11 O -0.59 -7.53 14.79 -4.35 -0.06 -7.59 16 12 N -0.71 1.36 5.54 -467.07 -2.59 -1.23 16 13 C 0.12 -0.26 5.67 86.38 0.49 0.23 16 14 C -0.11 0.89 5.16 30.59 0.16 1.04 16 15 C -0.11 0.53 3.63 -10.26 -0.04 0.49 16 16 H 0.08 -0.12 8.13 -2.38 -0.02 -0.14 16 17 C -0.15 0.87 7.54 31.12 0.23 1.10 16 18 C 0.04 -0.10 5.69 31.12 0.18 0.08 16 19 H 0.11 -0.64 8.14 -2.38 -0.02 -0.66 16 20 F -0.22 -1.33 17.39 44.97 0.78 -0.55 16 21 C -0.16 0.69 7.53 31.13 0.23 0.93 16 22 H 0.08 0.01 8.14 -2.39 -0.02 -0.01 16 23 H 0.11 -0.60 8.12 -2.39 -0.02 -0.62 16 24 H 0.08 0.36 6.56 -2.39 -0.02 0.34 16 25 H 0.19 -0.73 8.06 -2.91 -0.02 -0.76 16 26 H 0.12 -0.37 7.96 -2.39 -0.02 -0.39 16 27 H 0.38 -1.38 8.70 -74.06 -0.64 -2.03 16 28 H -0.31 -1.47 7.11 99.48 0.71 -0.77 16 29 H -0.28 0.33 7.11 99.48 0.71 1.04 16 30 H 0.17 -1.34 5.79 -2.91 -0.02 -1.35 16 31 H 0.42 -3.46 7.37 -92.71 -0.68 -4.14 16 32 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 33 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 34 H 0.09 -0.90 8.14 -2.38 -0.02 -0.92 16 35 H 0.09 -1.03 7.84 -2.39 -0.02 -1.05 16 36 H 0.07 -0.30 8.14 -2.38 -0.02 -0.32 16 37 H 0.12 -1.29 8.10 -2.39 -0.02 -1.31 16 38 H 0.12 -1.01 7.90 -2.39 -0.02 -1.03 16 39 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 Total: 0.00 -20.26 329.01 1.20 -19.07 By element: Atomic # 1 Polarization: -13.92 SS G_CDS: -0.22 Total: -14.14 kcal Atomic # 6 Polarization: 5.98 SS G_CDS: 4.79 Total: 10.77 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -4.28 Total: -3.96 kcal Atomic # 8 Polarization: -8.42 SS G_CDS: -1.98 Total: -10.40 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 0.78 Total: -0.55 kcal Atomic # 14 Polarization: -2.88 SS G_CDS: 2.10 Total: -0.78 kcal Total: -20.26 1.20 -19.07 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_10803934.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.387 kcal (2) G-P(sol) polarization free energy of solvation -20.263 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.650 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.195 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.068 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.455 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds