Wall clock time and date at job start Sun Mar 7 2021 02:32:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86298 * 109.47116 * 2 1 4 4 C 1.50695 * 109.47120 * 239.99630 * 2 1 3 5 5 C 1.36448 * 120.30185 * 240.25486 * 4 2 1 6 6 C 1.40093 * 119.26067 * 180.29259 * 5 4 2 7 7 C 1.40849 * 132.86965 * 179.73008 * 6 5 4 8 8 C 1.46576 * 126.57715 * 359.96304 * 7 6 5 9 9 O 1.21722 * 119.99985 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99848 * 180.02562 * 8 7 6 11 11 C 1.46498 * 119.99829 * 180.02562 * 10 8 7 12 12 C 1.53007 * 109.47078 * 179.97438 * 11 10 8 13 13 C 1.52999 * 109.47183 * 179.97438 * 12 11 10 14 14 H 1.09000 * 112.84823 * 43.80503 * 13 12 11 15 15 C 1.53778 * 113.61604 * 175.00231 * 13 12 11 16 16 C 1.53779 * 87.08288 * 139.98316 * 15 13 12 17 17 H 1.09003 * 113.60983 * 219.93645 * 16 15 13 18 18 F 1.39899 * 113.61639 * 89.11606 * 16 15 13 19 19 C 1.53781 * 87.08092 * 334.56568 * 16 15 13 20 20 C 1.40550 * 106.84508 * 179.97438 * 7 6 5 21 21 N 1.30749 * 108.73954 * 0.02562 * 20 7 6 22 22 N 1.36575 * 120.22736 * 359.70475 * 6 5 4 23 23 C 1.36242 * 120.08090 * 0.02562 * 22 6 5 24 24 C 1.35193 * 120.70617 * 359.97438 * 23 22 6 25 25 H 0.96700 * 113.99806 * 60.00110 * 1 2 3 26 26 H 1.09006 * 109.46863 * 120.00008 * 2 1 3 27 27 H 1.48501 * 109.99902 * 60.00204 * 3 2 1 28 28 H 1.48503 * 109.99741 * 181.31704 * 3 2 1 29 29 H 1.08008 * 120.36715 * 359.97438 * 5 4 2 30 30 H 0.97004 * 120.00165 * 359.97438 * 10 8 7 31 31 H 1.09003 * 109.46928 * 299.98834 * 11 10 8 32 32 H 1.08994 * 109.47471 * 59.99552 * 11 10 8 33 33 H 1.08995 * 109.46873 * 299.99774 * 12 11 10 34 34 H 1.09003 * 109.46751 * 60.00008 * 12 11 10 35 35 H 1.09001 * 113.60816 * 254.53221 * 15 13 12 36 36 H 1.08996 * 113.61388 * 25.42646 * 15 13 12 37 37 H 1.08998 * 113.61631 * 270.88593 * 19 16 15 38 38 H 1.08994 * 113.61321 * 139.98340 * 19 16 15 39 39 H 1.07992 * 125.63280 * 179.97438 * 20 7 6 40 40 H 1.08000 * 119.65193 * 179.97438 * 23 22 6 41 41 H 1.08002 * 119.83776 * 179.97438 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7119 -1.8234 -1.1123 6 6 3.1720 -2.4631 -2.2706 7 6 3.9776 -3.5989 -2.4822 8 6 4.5753 -4.4505 -1.4497 9 8 4.3920 -4.1998 -0.2728 10 7 5.3287 -5.5105 -1.8036 11 6 5.9256 -6.3620 -0.7716 12 6 6.7246 -7.4849 -1.4363 13 6 7.3486 -8.3738 -0.3586 14 1 6.6568 -8.6062 0.4510 15 6 8.0747 -9.6069 -0.9216 16 6 9.1564 -9.3582 0.1428 17 1 10.1714 -9.5210 -0.2199 18 9 8.9044 -10.0017 1.3591 19 6 8.7233 -7.8827 0.1251 20 6 4.0986 -3.7589 -3.8733 21 7 3.4276 -2.8059 -4.4657 22 7 2.8362 -1.9793 -3.5028 23 6 2.0517 -0.8706 -3.6105 24 6 1.5964 -0.2371 -2.5064 25 1 -0.3933 0.4417 -0.7651 26 1 1.7923 -0.5139 0.8900 27 1 1.5615 2.4678 1.2085 28 1 3.5346 1.7702 -0.0321 29 1 2.9763 -2.2038 -0.1366 30 1 5.4750 -5.7102 -2.7415 31 1 6.5892 -5.7644 -0.1466 32 1 5.1368 -6.7934 -0.1555 33 1 6.0608 -8.0824 -2.0611 34 1 7.5135 -7.0537 -2.0527 35 1 7.5276 -10.5387 -0.7786 36 1 8.4295 -9.4758 -1.9438 37 1 9.2555 -7.2802 -0.6110 38 1 8.6999 -7.4227 1.1129 39 1 4.6548 -4.5396 -4.3708 40 1 1.7908 -0.4937 -4.5884 41 1 0.9758 0.6409 -2.6081 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_11618758.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:06 Heat of formation + Delta-G solvation = 8.069506 kcal Electronic energy + Delta-G solvation = -25684.489554 eV Core-core repulsion = 21675.888965 eV Total energy + Delta-G solvation = -4008.600589 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.132 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -48.59212 -43.31008 -40.40043 -39.49656 -39.22859 -37.27883 -35.93494 -34.23174 -32.18378 -31.99679 -30.14905 -27.44064 -26.96571 -26.03559 -24.89293 -23.62251 -23.14594 -22.69006 -21.22529 -20.50116 -19.09478 -18.58157 -17.95292 -17.58072 -17.28197 -17.02331 -16.90362 -16.58676 -16.57055 -16.29810 -15.90016 -15.81560 -15.46409 -15.26398 -14.85469 -14.59504 -14.45944 -14.23554 -14.04166 -13.77159 -13.61502 -13.55871 -13.20280 -13.13123 -12.59908 -12.43147 -12.18644 -12.09597 -11.96803 -11.88282 -11.52952 -11.29417 -11.17054 -10.82878 -10.73748 -10.34696 -10.01741 -8.78353 -5.19642 -0.57752 -0.16787 0.98412 1.05872 1.11423 1.56399 1.86365 2.04874 2.26474 2.60698 3.04156 3.15688 3.17906 3.22816 3.32059 3.42981 3.49444 3.59772 3.63089 3.76728 3.83026 3.93611 4.00931 4.11823 4.19693 4.22044 4.32950 4.38288 4.48387 4.49698 4.53617 4.67747 4.69634 4.74337 4.83952 4.92714 5.03145 5.05235 5.07731 5.13111 5.24567 5.38073 5.51019 5.62246 6.29051 6.36654 6.60704 7.39871 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.699 3.301 4 C -0.068 4.068 5 C -0.096 4.096 6 C 0.169 3.831 7 C -0.317 4.317 8 C 0.600 3.400 9 O -0.550 6.550 10 N -0.730 5.730 11 C 0.122 3.878 12 C -0.121 4.121 13 C -0.107 4.107 14 H 0.099 0.901 15 C -0.157 4.157 16 C 0.061 3.939 17 H 0.096 0.904 18 F -0.197 7.197 19 C -0.160 4.160 20 C 0.120 3.880 21 N -0.313 5.313 22 N -0.267 5.267 23 C 0.122 3.878 24 C -0.157 4.157 25 H 0.378 0.622 26 H 0.123 0.877 27 H -0.247 1.247 28 H -0.255 1.255 29 H 0.161 0.839 30 H 0.398 0.602 31 H 0.069 0.931 32 H 0.068 0.932 33 H 0.074 0.926 34 H 0.073 0.927 35 H 0.081 0.919 36 H 0.100 0.900 37 H 0.100 0.900 38 H 0.081 0.919 39 H 0.199 0.801 40 H 0.180 0.820 41 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.170 2.770 -5.986 6.598 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.178 4.178 3 Si 0.598 3.402 4 C -0.074 4.074 5 C -0.116 4.116 6 C 0.048 3.952 7 C -0.331 4.331 8 C 0.389 3.611 9 O -0.429 6.429 10 N -0.382 5.382 11 C -0.001 4.001 12 C -0.159 4.159 13 C -0.126 4.126 14 H 0.117 0.883 15 C -0.195 4.195 16 C 0.025 3.975 17 H 0.114 0.886 18 F -0.178 7.178 19 C -0.197 4.197 20 C -0.061 4.061 21 N -0.133 5.133 22 N -0.031 5.031 23 C -0.004 4.004 24 C -0.178 4.178 25 H 0.226 0.774 26 H 0.140 0.860 27 H -0.171 1.171 28 H -0.179 1.179 29 H 0.178 0.822 30 H 0.232 0.768 31 H 0.087 0.913 32 H 0.087 0.913 33 H 0.093 0.907 34 H 0.092 0.908 35 H 0.100 0.900 36 H 0.118 0.882 37 H 0.118 0.882 38 H 0.100 0.900 39 H 0.215 0.785 40 H 0.197 0.803 41 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -0.010 3.613 -5.352 6.457 hybrid contribution 0.441 -1.233 0.393 1.367 sum 0.431 2.380 -4.959 5.517 Atomic orbital electron populations 1.86612 1.16309 1.81658 1.49083 1.25173 0.85595 1.10348 0.96725 0.95015 0.81460 0.75941 0.87755 1.20508 0.96004 0.94938 0.95938 1.20713 0.98279 0.94465 0.98121 1.19265 0.95608 0.94102 0.86203 1.19632 1.16146 1.03756 0.93603 1.16835 0.77487 0.79520 0.87295 1.90792 1.61483 1.71979 1.18619 1.45693 1.53025 1.29309 1.10172 1.21340 0.96948 0.91275 0.90534 1.21776 0.99811 0.96190 0.98080 1.22508 0.96145 0.95457 0.98449 0.88279 1.23614 0.97302 0.99406 0.99193 1.22385 0.99950 0.93547 0.81664 0.88594 1.92828 1.95790 1.82861 1.46315 1.23687 0.96814 0.95673 1.03568 1.24058 0.94385 0.95727 0.91924 1.77634 1.18439 1.06507 1.10721 1.46092 1.32141 1.19090 1.05757 1.21603 0.91789 0.85112 1.01934 1.20722 1.04150 1.02703 0.90223 0.77410 0.85988 1.17059 1.17882 0.82153 0.76800 0.91279 0.91322 0.90713 0.90830 0.89999 0.88169 0.88174 0.89986 0.78486 0.80328 0.81561 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.57 12.88 -35.23 -0.45 0.11 16 2 C -0.07 0.09 2.84 36.00 0.10 0.19 16 3 Si 0.70 -1.59 31.96 -169.99 -5.43 -7.02 16 4 C -0.07 0.05 4.53 -104.55 -0.47 -0.43 16 5 C -0.10 -0.21 9.35 -39.53 -0.37 -0.58 16 6 C 0.17 0.52 6.76 -84.07 -0.57 -0.05 16 7 C -0.32 -0.88 6.17 -104.68 -0.65 -1.52 16 8 C 0.60 2.13 7.78 -12.90 -0.10 2.03 16 9 O -0.55 -3.89 15.71 5.17 0.08 -3.81 16 10 N -0.73 0.00 5.55 -61.65 -0.34 -0.34 16 11 C 0.12 -0.03 5.66 -4.04 -0.02 -0.05 16 12 C -0.12 0.33 5.17 -26.73 -0.14 0.19 16 13 C -0.11 0.18 3.63 -89.81 -0.33 -0.14 16 14 H 0.10 -0.07 8.13 -51.93 -0.42 -0.49 16 15 C -0.16 0.31 7.54 -25.92 -0.20 0.11 16 16 C 0.06 -0.04 5.69 -25.92 -0.15 -0.19 16 17 H 0.10 -0.20 8.14 -51.93 -0.42 -0.63 16 18 F -0.20 -0.56 17.38 2.25 0.04 -0.52 16 19 C -0.16 0.25 7.53 -25.92 -0.20 0.06 16 20 C 0.12 0.08 11.44 -17.14 -0.20 -0.12 16 21 N -0.31 -0.75 12.57 30.75 0.39 -0.37 16 22 N -0.27 -0.49 3.86 -10.55 -0.04 -0.53 16 23 C 0.12 -0.21 11.17 -16.68 -0.19 -0.40 16 24 C -0.16 0.52 8.38 -39.94 -0.33 0.19 16 25 H 0.38 -2.21 8.08 45.56 0.37 -1.84 16 26 H 0.12 -0.05 7.71 -51.93 -0.40 -0.45 16 27 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 28 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 29 H 0.16 0.49 7.01 -52.48 -0.37 0.12 16 30 H 0.40 -1.22 7.39 -40.82 -0.30 -1.52 16 31 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 32 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 33 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 34 H 0.07 -0.27 7.84 -51.93 -0.41 -0.67 16 35 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 37 H 0.10 -0.29 7.89 -51.93 -0.41 -0.70 16 38 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 39 H 0.20 -0.73 7.46 -52.49 -0.39 -1.13 16 40 H 0.18 -0.87 8.06 -52.49 -0.42 -1.29 16 41 H 0.17 -1.33 7.31 -52.49 -0.38 -1.71 16 LS Contribution 351.58 15.07 5.30 5.30 Total: 0.00 -11.50 351.58 -9.55 -21.05 By element: Atomic # 1 Polarization: -7.88 SS G_CDS: -5.29 Total: -13.17 kcal Atomic # 6 Polarization: 3.09 SS G_CDS: -3.80 Total: -0.70 kcal Atomic # 7 Polarization: -1.24 SS G_CDS: 0.00 Total: -1.24 kcal Atomic # 8 Polarization: -3.32 SS G_CDS: -0.37 Total: -3.70 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.04 Total: -0.52 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.43 Total: -7.02 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -11.50 -9.55 -21.05 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_11618758.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.121 kcal (2) G-P(sol) polarization free energy of solvation -11.498 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.623 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.554 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.052 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds