Wall clock time and date at job start Sun Mar 7 2021 02:32:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.35451 * 125.56592 * 2 1 4 4 C 1.50698 * 126.06697 * 359.97438 * 3 2 1 5 5 O 1.42899 * 109.47083 * 149.97977 * 4 3 2 6 6 Si 1.86298 * 109.46983 * 29.98246 * 4 3 2 7 7 C 1.39833 * 107.86501 * 179.70500 * 3 2 1 8 8 C 1.50698 * 126.46010 * 180.29517 * 7 3 2 9 9 C 1.37868 * 107.08372 * 0.41564 * 7 3 2 10 10 C 1.46690 * 126.23165 * 179.85177 * 9 7 3 11 11 O 1.21693 * 119.99880 * 359.70938 * 10 9 7 12 12 N 1.34771 * 119.99634 * 179.71502 * 10 9 7 13 13 C 1.46505 * 119.99622 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47212 * 179.97438 * 13 12 10 15 15 C 1.52992 * 109.47482 * 179.97438 * 14 13 12 16 16 H 1.09003 * 112.85473 * 316.19996 * 15 14 13 17 17 C 1.53787 * 113.61317 * 87.50189 * 15 14 13 18 18 C 1.53787 * 87.08199 * 139.98416 * 17 15 14 19 19 H 1.08997 * 113.61409 * 220.01809 * 18 17 15 20 20 F 1.39899 * 113.61281 * 89.11370 * 18 17 15 21 21 C 1.53780 * 113.62083 * 185.00014 * 15 14 13 22 22 N 1.35535 * 125.56336 * 179.97438 * 2 1 3 23 23 H 1.09003 * 109.46936 * 270.02236 * 1 2 3 24 24 H 1.09000 * 109.47275 * 30.01898 * 1 2 3 25 25 H 1.09004 * 109.47192 * 150.01828 * 1 2 3 26 26 H 1.08997 * 109.47551 * 269.97974 * 4 3 2 27 27 H 0.96699 * 114.00268 * 180.02562 * 5 4 3 28 28 H 1.48500 * 110.00389 * 59.99584 * 6 4 3 29 29 H 1.48505 * 110.00179 * 181.31857 * 6 4 3 30 30 H 1.09000 * 109.47730 * 270.16440 * 8 7 3 31 31 H 1.09004 * 109.46973 * 30.16235 * 8 7 3 32 32 H 1.09001 * 109.47507 * 150.16096 * 8 7 3 33 33 H 0.96996 * 120.00772 * 359.97438 * 12 10 9 34 34 H 1.09002 * 109.47068 * 299.99729 * 13 12 10 35 35 H 1.09001 * 109.47372 * 59.99816 * 13 12 10 36 36 H 1.09002 * 109.47153 * 300.00008 * 14 13 12 37 37 H 1.08998 * 109.47533 * 59.99637 * 14 13 12 38 38 H 1.09001 * 113.61139 * 254.52924 * 17 15 14 39 39 H 1.08997 * 113.61535 * 25.43674 * 17 15 14 40 40 H 1.09007 * 113.61238 * 334.56895 * 21 15 14 41 41 H 1.08997 * 113.61790 * 105.38077 * 21 15 14 42 42 H 0.97000 * 125.67435 * 0.04954 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8200 2.5320 -0.0005 5 8 2.7767 3.3518 0.6736 6 14 0.1801 2.6422 0.8766 7 6 3.6269 0.6767 0.0069 8 6 4.8486 1.5590 0.0156 9 6 3.6121 -0.7019 0.0014 10 6 4.7860 -1.5816 0.0024 11 8 5.9049 -1.1031 0.0032 12 7 4.6252 -2.9197 0.0023 13 6 5.7976 -3.7982 0.0027 14 6 5.3407 -5.2584 0.0031 15 6 6.5649 -6.1759 0.0030 16 1 7.3383 -5.8499 -0.6926 17 6 7.0952 -6.4959 1.4106 18 6 7.3265 -7.9321 0.9115 19 1 7.0690 -8.6960 1.6450 20 9 8.5874 -8.1300 0.3388 21 6 6.2162 -7.6687 -0.1194 22 7 2.2953 -1.1025 0.0005 23 1 -0.3633 0.0004 1.0277 24 1 -0.3634 0.8898 -0.5141 25 1 -0.3634 -0.8902 -0.5136 26 1 1.7062 2.8768 -1.0283 27 1 2.5356 4.2875 0.7119 28 1 0.3217 2.1750 2.2790 29 1 -0.3144 4.0423 0.8552 30 1 5.1474 1.7762 -1.0099 31 1 4.6198 2.4911 0.5324 32 1 5.6621 1.0482 0.5306 33 1 3.7334 -3.3011 0.0019 34 1 6.3968 -3.6050 -0.8871 35 1 6.3962 -3.6050 0.8929 36 1 4.7417 -5.4514 0.8931 37 1 4.7419 -5.4521 -0.8868 38 1 8.0149 -5.9674 1.6613 39 1 6.3370 -6.4214 2.1901 40 1 5.2176 -7.9148 0.2418 41 1 6.4248 -8.0865 -1.1043 42 1 1.9833 -2.0210 0.0002 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_12297754.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:10 Heat of formation + Delta-G solvation = -58.608045 kcal Electronic energy + Delta-G solvation = -23817.197259 eV Core-core repulsion = 20100.272027 eV Total energy + Delta-G solvation = -3716.925231 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.153 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -48.62671 -42.58472 -40.29372 -39.39971 -37.75820 -36.14134 -33.60544 -33.41201 -31.79675 -29.27454 -27.66125 -27.00322 -26.50284 -25.34764 -23.04976 -22.33958 -20.75837 -20.43764 -20.05444 -19.24990 -18.34821 -17.40462 -17.07084 -16.82517 -16.65334 -16.42724 -16.15396 -15.92819 -15.50824 -15.22959 -14.96663 -14.67847 -14.57192 -14.27889 -14.13179 -13.94654 -13.83361 -13.73442 -13.63508 -13.20387 -13.13387 -12.85886 -12.67242 -12.61157 -12.25563 -12.14408 -11.94606 -11.71558 -11.34561 -11.22575 -10.86214 -10.49271 -10.17143 -9.37471 -8.91043 -4.81539 0.47820 1.22268 1.63283 1.75494 1.97203 2.07522 2.11327 2.46782 3.12938 3.17366 3.31486 3.43618 3.53402 3.69048 3.70745 3.81616 3.95631 4.00505 4.12985 4.20041 4.27052 4.32933 4.42202 4.43682 4.48401 4.61463 4.62680 4.66146 4.70412 4.76614 4.80915 4.87631 4.95319 4.99250 5.03858 5.24314 5.29905 5.32979 5.52295 5.60076 5.80729 6.03647 6.33468 6.49730 6.62335 7.22691 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C 0.063 3.937 3 C -0.168 4.168 4 C -0.034 4.034 5 O -0.532 6.532 6 Si 0.650 3.350 7 C -0.033 4.033 8 C -0.097 4.097 9 C -0.071 4.071 10 C 0.591 3.409 11 O -0.521 6.521 12 N -0.736 5.736 13 C 0.121 3.879 14 C -0.120 4.120 15 C -0.107 4.107 16 H 0.100 0.900 17 C -0.160 4.160 18 C 0.061 3.939 19 H 0.097 0.903 20 F -0.197 7.197 21 C -0.157 4.157 22 N -0.535 5.535 23 H 0.088 0.912 24 H 0.101 0.899 25 H 0.088 0.912 26 H 0.070 0.930 27 H 0.375 0.625 28 H -0.256 1.256 29 H -0.259 1.259 30 H 0.062 0.938 31 H 0.085 0.915 32 H 0.074 0.926 33 H 0.393 0.607 34 H 0.071 0.929 35 H 0.071 0.929 36 H 0.072 0.928 37 H 0.073 0.927 38 H 0.082 0.918 39 H 0.099 0.901 40 H 0.099 0.901 41 H 0.082 0.918 42 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.140 -3.405 -1.084 8.890 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C -0.055 4.055 3 C -0.175 4.175 4 C -0.144 4.144 5 O -0.338 6.338 6 Si 0.551 3.449 7 C -0.041 4.041 8 C -0.153 4.153 9 C -0.182 4.182 10 C 0.379 3.621 11 O -0.397 6.397 12 N -0.388 5.388 13 C -0.003 4.003 14 C -0.158 4.158 15 C -0.126 4.126 16 H 0.118 0.882 17 C -0.198 4.198 18 C 0.025 3.975 19 H 0.114 0.886 20 F -0.177 7.177 21 C -0.195 4.195 22 N -0.132 5.132 23 H 0.106 0.894 24 H 0.119 0.881 25 H 0.106 0.894 26 H 0.088 0.912 27 H 0.223 0.777 28 H -0.180 1.180 29 H -0.184 1.184 30 H 0.081 0.919 31 H 0.104 0.896 32 H 0.093 0.907 33 H 0.226 0.774 34 H 0.089 0.911 35 H 0.090 0.910 36 H 0.091 0.909 37 H 0.092 0.908 38 H 0.101 0.899 39 H 0.118 0.882 40 H 0.118 0.882 41 H 0.100 0.900 42 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -7.397 -3.481 -0.361 8.183 hybrid contribution 0.207 0.247 0.080 0.332 sum -7.189 -3.234 -0.281 7.888 Atomic orbital electron populations 1.20402 0.87587 1.03576 1.04167 1.20002 0.93305 0.85665 1.06558 1.18443 0.92843 0.92505 1.13733 1.23939 1.01528 0.88875 1.00057 1.86559 1.45724 1.22244 1.79306 0.95634 0.81439 0.84205 0.83670 1.19794 0.95020 0.90534 0.98760 1.20514 0.93730 0.98906 1.02190 1.20105 0.82721 0.94131 1.21226 1.17004 0.87585 0.81164 0.76355 1.90848 1.24205 1.74919 1.49746 1.45880 1.09846 1.05947 1.77111 1.21387 0.87685 0.88176 1.03003 1.21771 0.97934 0.93136 1.02972 1.22510 0.97811 0.94400 0.97851 0.88199 1.23693 1.03043 0.95509 0.97530 1.22374 0.79979 0.98835 0.96295 0.88557 1.92831 1.42394 1.96209 1.86302 1.23613 0.99174 0.96192 1.00529 1.41658 1.05257 1.08083 1.58241 0.89365 0.88137 0.89385 0.91224 0.77688 1.17992 1.18448 0.91886 0.89611 0.90733 0.77403 0.91067 0.91049 0.90912 0.90802 0.89906 0.88206 0.88223 0.89958 0.74664 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.47 8.21 36.00 0.30 0.77 16 2 C 0.06 -0.04 6.84 -81.95 -0.56 -0.60 16 3 C -0.17 -0.37 5.42 -105.02 -0.57 -0.94 16 4 C -0.03 -0.02 3.03 36.00 0.11 0.08 16 5 O -0.53 -0.99 10.01 -35.23 -0.35 -1.34 16 6 Si 0.65 -0.48 26.76 -169.99 -4.55 -5.03 16 7 C -0.03 -0.14 6.15 -104.16 -0.64 -0.78 16 8 C -0.10 -0.47 9.51 36.00 0.34 -0.13 16 9 C -0.07 -0.19 7.06 -81.98 -0.58 -0.77 16 10 C 0.59 2.04 7.79 -12.85 -0.10 1.94 16 11 O -0.52 -3.77 14.80 5.20 0.08 -3.70 16 12 N -0.74 0.32 5.55 -61.61 -0.34 -0.02 16 13 C 0.12 -0.07 5.66 -4.04 -0.02 -0.10 16 14 C -0.12 0.38 5.16 -26.74 -0.14 0.24 16 15 C -0.11 0.22 3.63 -89.81 -0.33 -0.11 16 16 H 0.10 -0.10 8.13 -51.93 -0.42 -0.52 16 17 C -0.16 0.29 7.53 -25.91 -0.20 0.10 16 18 C 0.06 -0.06 5.69 -25.92 -0.15 -0.20 16 19 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 20 F -0.20 -0.51 17.38 2.25 0.04 -0.47 16 21 C -0.16 0.37 7.54 -25.92 -0.20 0.17 16 22 N -0.53 0.56 5.99 -5.69 -0.03 0.52 16 23 H 0.09 -0.45 7.13 -51.93 -0.37 -0.82 16 24 H 0.10 -0.60 5.17 -51.93 -0.27 -0.87 16 25 H 0.09 -0.59 8.14 -51.93 -0.42 -1.01 16 26 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 27 H 0.38 -0.79 8.74 45.56 0.40 -0.39 16 28 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 29 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 30 H 0.06 0.29 8.14 -51.93 -0.42 -0.13 16 31 H 0.09 0.41 5.61 -51.93 -0.29 0.12 16 32 H 0.07 0.47 6.49 -51.93 -0.34 0.13 16 33 H 0.39 -1.42 7.60 -40.82 -0.31 -1.73 16 34 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 35 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 36 H 0.07 -0.29 7.84 -51.93 -0.41 -0.70 16 37 H 0.07 -0.27 8.14 -51.93 -0.42 -0.70 16 38 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 39 H 0.10 -0.32 7.90 -51.93 -0.41 -0.73 16 40 H 0.10 -0.39 8.10 -51.93 -0.42 -0.81 16 41 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 42 H 0.42 -1.97 8.19 -40.82 -0.33 -2.31 16 LS Contribution 337.92 15.07 5.09 5.09 Total: 0.00 -10.04 337.92 -8.96 -19.00 By element: Atomic # 1 Polarization: -7.57 SS G_CDS: -6.17 Total: -13.73 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -2.73 Total: -0.33 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -0.38 Total: 0.50 kcal Atomic # 8 Polarization: -4.76 SS G_CDS: -0.28 Total: -5.04 kcal Atomic # 9 Polarization: -0.51 SS G_CDS: 0.04 Total: -0.47 kcal Atomic # 14 Polarization: -0.48 SS G_CDS: -4.55 Total: -5.03 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -10.04 -8.96 -19.00 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12297754.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.604 kcal (2) G-P(sol) polarization free energy of solvation -10.042 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.646 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.962 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.004 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.608 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds