Wall clock time and date at job start Sun Mar 7 2021 02:32:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.35451 * 125.56592 * 2 1 4 4 C 1.50698 * 126.06697 * 359.97438 * 3 2 1 5 5 O 1.42899 * 109.47083 * 149.97977 * 4 3 2 6 6 Si 1.86298 * 109.46983 * 29.98246 * 4 3 2 7 7 C 1.39833 * 107.86501 * 179.70500 * 3 2 1 8 8 C 1.50698 * 126.46010 * 180.29517 * 7 3 2 9 9 C 1.37868 * 107.08372 * 0.41564 * 7 3 2 10 10 C 1.46690 * 126.23165 * 179.85177 * 9 7 3 11 11 O 1.21693 * 119.99880 * 359.70938 * 10 9 7 12 12 N 1.34771 * 119.99634 * 179.71502 * 10 9 7 13 13 C 1.46505 * 119.99622 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47212 * 179.97438 * 13 12 10 15 15 C 1.52992 * 109.47482 * 179.97438 * 14 13 12 16 16 H 1.09003 * 112.85473 * 316.19996 * 15 14 13 17 17 C 1.53787 * 113.61317 * 87.50189 * 15 14 13 18 18 C 1.53787 * 87.08199 * 139.98416 * 17 15 14 19 19 H 1.08997 * 113.61409 * 220.01809 * 18 17 15 20 20 F 1.39899 * 113.61281 * 89.11370 * 18 17 15 21 21 C 1.53780 * 113.62083 * 185.00014 * 15 14 13 22 22 N 1.35535 * 125.56336 * 179.97438 * 2 1 3 23 23 H 1.09003 * 109.46936 * 270.02236 * 1 2 3 24 24 H 1.09000 * 109.47275 * 30.01898 * 1 2 3 25 25 H 1.09004 * 109.47192 * 150.01828 * 1 2 3 26 26 H 1.08997 * 109.47551 * 269.97974 * 4 3 2 27 27 H 0.96699 * 114.00268 * 180.02562 * 5 4 3 28 28 H 1.48500 * 110.00389 * 59.99584 * 6 4 3 29 29 H 1.48505 * 110.00179 * 181.31857 * 6 4 3 30 30 H 1.09000 * 109.47730 * 270.16440 * 8 7 3 31 31 H 1.09004 * 109.46973 * 30.16235 * 8 7 3 32 32 H 1.09001 * 109.47507 * 150.16096 * 8 7 3 33 33 H 0.96996 * 120.00772 * 359.97438 * 12 10 9 34 34 H 1.09002 * 109.47068 * 299.99729 * 13 12 10 35 35 H 1.09001 * 109.47372 * 59.99816 * 13 12 10 36 36 H 1.09002 * 109.47153 * 300.00008 * 14 13 12 37 37 H 1.08998 * 109.47533 * 59.99637 * 14 13 12 38 38 H 1.09001 * 113.61139 * 254.52924 * 17 15 14 39 39 H 1.08997 * 113.61535 * 25.43674 * 17 15 14 40 40 H 1.09007 * 113.61238 * 334.56895 * 21 15 14 41 41 H 1.08997 * 113.61790 * 105.38077 * 21 15 14 42 42 H 0.97000 * 125.67435 * 0.04954 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8200 2.5320 -0.0005 5 8 2.7767 3.3518 0.6736 6 14 0.1801 2.6422 0.8766 7 6 3.6269 0.6767 0.0069 8 6 4.8486 1.5590 0.0156 9 6 3.6121 -0.7019 0.0014 10 6 4.7860 -1.5816 0.0024 11 8 5.9049 -1.1031 0.0032 12 7 4.6252 -2.9197 0.0023 13 6 5.7976 -3.7982 0.0027 14 6 5.3407 -5.2584 0.0031 15 6 6.5649 -6.1759 0.0030 16 1 7.3383 -5.8499 -0.6926 17 6 7.0952 -6.4959 1.4106 18 6 7.3265 -7.9321 0.9115 19 1 7.0690 -8.6960 1.6450 20 9 8.5874 -8.1300 0.3388 21 6 6.2162 -7.6687 -0.1194 22 7 2.2953 -1.1025 0.0005 23 1 -0.3633 0.0004 1.0277 24 1 -0.3634 0.8898 -0.5141 25 1 -0.3634 -0.8902 -0.5136 26 1 1.7062 2.8768 -1.0283 27 1 2.5356 4.2875 0.7119 28 1 0.3217 2.1750 2.2790 29 1 -0.3144 4.0423 0.8552 30 1 5.1474 1.7762 -1.0099 31 1 4.6198 2.4911 0.5324 32 1 5.6621 1.0482 0.5306 33 1 3.7334 -3.3011 0.0019 34 1 6.3968 -3.6050 -0.8871 35 1 6.3962 -3.6050 0.8929 36 1 4.7417 -5.4514 0.8931 37 1 4.7419 -5.4521 -0.8868 38 1 8.0149 -5.9674 1.6613 39 1 6.3370 -6.4214 2.1901 40 1 5.2176 -7.9148 0.2418 41 1 6.4248 -8.0865 -1.1043 42 1 1.9833 -2.0210 0.0002 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_12297754.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:10 Heat of formation + Delta-G solvation = -60.877137 kcal Electronic energy + Delta-G solvation = -23817.295654 eV Core-core repulsion = 20100.272027 eV Total energy + Delta-G solvation = -3717.023627 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.153 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -48.68797 -42.64381 -40.42506 -39.34100 -37.82313 -36.26697 -33.71371 -33.37566 -31.74236 -29.28693 -27.73146 -26.85649 -26.55889 -25.30932 -22.94256 -22.45282 -20.76738 -20.39904 -20.12148 -19.29799 -18.41768 -17.37458 -17.05280 -16.89566 -16.62555 -16.50300 -16.14256 -15.97803 -15.53175 -15.24042 -14.97654 -14.75174 -14.54910 -14.32606 -14.13345 -13.97325 -13.81864 -13.67780 -13.50221 -13.25604 -13.12929 -12.99626 -12.63328 -12.56646 -12.38970 -11.99403 -11.83434 -11.80587 -11.28523 -11.19123 -10.95366 -10.57904 -10.30705 -9.48337 -8.94839 -4.76768 0.34636 1.21238 1.65832 1.72243 1.93618 2.09286 2.13067 2.24833 3.26658 3.33147 3.35065 3.58772 3.67992 3.81483 3.85319 3.88522 4.05174 4.09384 4.20898 4.27087 4.40947 4.46826 4.56658 4.61876 4.68116 4.71046 4.72284 4.80723 4.80753 4.83143 4.88879 4.92370 5.00763 5.07522 5.13269 5.15561 5.21420 5.33332 5.35698 5.47586 5.69670 5.84038 6.38046 6.56451 6.73234 7.07518 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C 0.084 3.916 3 C -0.201 4.201 4 C -0.054 4.054 5 O -0.557 6.557 6 Si 0.757 3.243 7 C -0.071 4.071 8 C -0.089 4.089 9 C -0.086 4.086 10 C 0.585 3.415 11 O -0.572 6.572 12 N -0.716 5.716 13 C 0.121 3.879 14 C -0.105 4.105 15 C -0.110 4.110 16 H 0.081 0.919 17 C -0.158 4.158 18 C 0.044 3.956 19 H 0.113 0.887 20 F -0.222 7.222 21 C -0.146 4.146 22 N -0.515 5.515 23 H 0.100 0.900 24 H 0.119 0.881 25 H 0.121 0.879 26 H 0.082 0.918 27 H 0.389 0.611 28 H -0.307 1.307 29 H -0.288 1.288 30 H 0.055 0.945 31 H 0.082 0.918 32 H 0.051 0.949 33 H 0.412 0.588 34 H 0.053 0.947 35 H 0.056 0.944 36 H 0.093 0.907 37 H 0.088 0.912 38 H 0.065 0.935 39 H 0.120 0.880 40 H 0.125 0.875 41 H 0.074 0.926 42 H 0.435 0.565 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.545 -4.820 -1.249 12.573 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C -0.036 4.036 3 C -0.207 4.207 4 C -0.162 4.162 5 O -0.367 6.367 6 Si 0.663 3.337 7 C -0.079 4.079 8 C -0.145 4.145 9 C -0.198 4.198 10 C 0.374 3.626 11 O -0.452 6.452 12 N -0.368 5.368 13 C -0.003 4.003 14 C -0.143 4.143 15 C -0.129 4.129 16 H 0.099 0.901 17 C -0.196 4.196 18 C 0.008 3.992 19 H 0.131 0.869 20 F -0.203 7.203 21 C -0.184 4.184 22 N -0.114 5.114 23 H 0.118 0.882 24 H 0.136 0.864 25 H 0.140 0.860 26 H 0.100 0.900 27 H 0.239 0.761 28 H -0.235 1.235 29 H -0.216 1.216 30 H 0.074 0.926 31 H 0.101 0.899 32 H 0.070 0.930 33 H 0.248 0.752 34 H 0.072 0.928 35 H 0.074 0.926 36 H 0.111 0.889 37 H 0.107 0.893 38 H 0.084 0.916 39 H 0.138 0.862 40 H 0.143 0.857 41 H 0.093 0.907 42 H 0.277 0.723 Dipole moment (debyes) X Y Z Total from point charges -10.828 -4.954 -0.560 11.921 hybrid contribution 1.283 0.699 0.166 1.470 sum -9.545 -4.255 -0.394 10.458 Atomic orbital electron populations 1.20712 0.84112 1.05890 1.05641 1.20622 0.95134 0.84638 1.03161 1.18785 0.92418 0.94147 1.15328 1.24378 1.02352 0.88232 1.01247 1.86517 1.47004 1.23539 1.79603 0.94563 0.78551 0.81285 0.79350 1.19968 0.95665 0.91522 1.00794 1.20346 0.93968 0.98892 1.01339 1.19898 0.83963 0.93610 1.22296 1.17237 0.87164 0.82294 0.75902 1.90818 1.26063 1.75991 1.52297 1.45700 1.10995 1.04695 1.75394 1.21389 0.87506 0.89892 1.01492 1.21684 0.97564 0.90408 1.04642 1.22472 0.97903 0.95163 0.97337 0.90090 1.23736 1.02930 0.94734 0.98198 1.22737 0.79276 0.99857 0.97353 0.86886 1.92776 1.44324 1.96388 1.86809 1.23607 0.99742 0.95241 0.99793 1.41605 1.03753 1.09265 1.56801 0.88188 0.86356 0.86045 0.89995 0.76122 1.23530 1.21618 0.92599 0.89936 0.92980 0.75190 0.92824 0.92580 0.88854 0.89342 0.91587 0.86177 0.85714 0.90685 0.72303 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 1.39 8.21 71.24 0.59 1.97 16 2 C 0.08 -0.24 6.84 41.34 0.28 0.04 16 3 C -0.20 -0.93 5.42 -20.12 -0.11 -1.04 16 4 C -0.05 -0.09 3.03 71.24 0.22 0.13 16 5 O -0.56 -2.88 10.01 -148.98 -1.49 -4.37 16 6 Si 0.76 -1.81 26.76 68.60 1.84 0.02 16 7 C -0.07 -0.74 6.15 -19.57 -0.12 -0.86 16 8 C -0.09 -1.18 9.51 71.24 0.68 -0.50 16 9 C -0.09 -0.54 7.06 40.35 0.28 -0.26 16 10 C 0.58 5.00 7.79 86.45 0.67 5.67 16 11 O -0.57 -10.22 14.80 -4.33 -0.06 -10.28 16 12 N -0.72 0.57 5.55 -467.07 -2.59 -2.02 16 13 C 0.12 -0.06 5.66 86.38 0.49 0.43 16 14 C -0.11 0.80 5.16 30.59 0.16 0.96 16 15 C -0.11 0.45 3.63 -10.27 -0.04 0.42 16 16 H 0.08 -0.03 8.13 -2.39 -0.02 -0.05 16 17 C -0.16 0.57 7.53 31.12 0.23 0.80 16 18 C 0.04 -0.08 5.69 31.12 0.18 0.10 16 19 H 0.11 -0.63 8.14 -2.39 -0.02 -0.65 16 20 F -0.22 -1.45 17.38 44.97 0.78 -0.67 16 21 C -0.15 0.83 7.54 31.12 0.23 1.06 16 22 N -0.52 1.77 5.99 -171.93 -1.03 0.74 16 23 H 0.10 -1.38 7.13 -2.39 -0.02 -1.39 16 24 H 0.12 -1.86 5.17 -2.39 -0.01 -1.87 16 25 H 0.12 -2.24 8.14 -2.38 -0.02 -2.26 16 26 H 0.08 -0.14 7.96 -2.39 -0.02 -0.15 16 27 H 0.39 -1.16 8.74 -74.06 -0.65 -1.81 16 28 H -0.31 -1.91 7.11 99.48 0.71 -1.21 16 29 H -0.29 -0.64 7.11 99.48 0.71 0.06 16 30 H 0.06 0.73 8.14 -2.39 -0.02 0.71 16 31 H 0.08 1.07 5.61 -2.39 -0.01 1.05 16 32 H 0.05 0.89 6.49 -2.39 -0.02 0.87 16 33 H 0.41 -3.64 7.60 -92.71 -0.70 -4.35 16 34 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 35 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 36 H 0.09 -1.02 7.84 -2.39 -0.02 -1.04 16 37 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 38 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 39 H 0.12 -0.94 7.90 -2.39 -0.02 -0.95 16 40 H 0.12 -1.32 8.10 -2.38 -0.02 -1.34 16 41 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 42 H 0.44 -5.29 8.19 -92.71 -0.76 -6.05 16 Total: 0.00 -29.16 337.92 0.18 -28.98 By element: Atomic # 1 Polarization: -20.31 SS G_CDS: -1.01 Total: -21.32 kcal Atomic # 6 Polarization: 5.17 SS G_CDS: 3.74 Total: 8.91 kcal Atomic # 7 Polarization: 2.34 SS G_CDS: -3.62 Total: -1.28 kcal Atomic # 8 Polarization: -13.10 SS G_CDS: -1.56 Total: -14.65 kcal Atomic # 9 Polarization: -1.45 SS G_CDS: 0.78 Total: -0.67 kcal Atomic # 14 Polarization: -1.81 SS G_CDS: 1.84 Total: 0.02 kcal Total: -29.16 0.18 -28.98 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12297754.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.895 kcal (2) G-P(sol) polarization free energy of solvation -29.160 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.055 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.177 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.982 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.877 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds