Wall clock time and date at job start Sun Mar 7 2021 02:32:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86299 * 109.47378 * 2 1 4 4 C 1.50703 * 109.47032 * 240.00082 * 2 1 3 5 5 C 1.38425 * 119.89291 * 119.99769 * 4 2 1 6 6 C 1.38241 * 120.34117 * 180.02562 * 5 4 2 7 7 C 1.38281 * 120.11848 * 0.25735 * 6 5 4 8 8 F 1.35098 * 120.10964 * 179.72416 * 7 6 5 9 9 C 1.39865 * 119.77456 * 359.43330 * 7 6 5 10 10 C 1.47701 * 120.16455 * 180.29546 * 9 7 6 11 11 O 1.21575 * 119.99665 * 0.28976 * 10 9 7 12 12 N 1.34776 * 120.00261 * 180.28817 * 10 9 7 13 13 C 1.46492 * 120.00101 * 180.02562 * 12 10 9 14 14 C 1.53001 * 109.47313 * 180.02562 * 13 12 10 15 15 C 1.52999 * 109.47357 * 179.97438 * 14 13 12 16 16 H 1.09003 * 112.84841 * 43.80101 * 15 14 13 17 17 C 1.53779 * 113.61485 * 174.99607 * 15 14 13 18 18 C 1.53771 * 87.08356 * 139.98105 * 17 15 14 19 19 H 1.09001 * 113.61767 * 219.93669 * 18 17 15 20 20 F 1.39900 * 113.61453 * 89.11457 * 18 17 15 21 21 C 1.53778 * 113.61466 * 272.49302 * 15 14 13 22 22 C 1.37895 * 119.89356 * 299.98284 * 4 2 1 23 23 H 0.96701 * 114.00278 * 299.99745 * 1 2 3 24 24 H 1.09002 * 109.47535 * 120.00576 * 2 1 3 25 25 H 1.48499 * 109.99889 * 178.68106 * 3 2 1 26 26 H 1.48498 * 110.00029 * 300.00139 * 3 2 1 27 27 H 1.07997 * 119.82475 * 0.02562 * 5 4 2 28 28 H 1.08002 * 119.93775 * 179.97438 * 6 5 4 29 29 H 0.97002 * 119.99733 * 0.02562 * 12 10 9 30 30 H 1.08998 * 109.47081 * 299.99910 * 13 12 10 31 31 H 1.08995 * 109.47345 * 60.00054 * 13 12 10 32 32 H 1.09004 * 109.46688 * 300.00274 * 14 13 12 33 33 H 1.09000 * 109.47157 * 59.99111 * 14 13 12 34 34 H 1.09003 * 113.61759 * 254.53253 * 17 15 14 35 35 H 1.09005 * 113.61288 * 25.43087 * 17 15 14 36 36 H 1.08994 * 113.61517 * 334.56990 * 21 15 14 37 37 H 1.08999 * 113.61371 * 105.46909 * 21 15 14 38 38 H 1.08002 * 120.05967 * 0.02562 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7269 -0.0355 -2.1402 6 6 3.1923 -0.6780 -3.2724 7 6 2.8606 -2.0000 -3.5058 8 9 3.3110 -2.6260 -4.6150 9 6 2.0624 -2.6885 -2.5865 10 6 1.7083 -4.1027 -2.8240 11 8 2.1153 -4.6725 -3.8178 12 7 0.9341 -4.7613 -1.9390 13 6 0.5834 -6.1641 -2.1743 14 6 -0.2966 -6.6688 -1.0290 15 6 -0.6634 -8.1336 -1.2750 16 1 0.1836 -8.7312 -1.6121 17 6 -1.4481 -8.7748 -0.1183 18 6 -2.3020 -9.4740 -1.1892 19 1 -3.3633 -9.5137 -0.9440 20 9 -1.7910 -10.7121 -1.5930 21 6 -1.9282 -8.3167 -2.1304 22 6 1.5970 -2.0307 -1.4464 23 1 -0.3934 0.4417 0.7651 24 1 1.7923 -0.5139 0.8899 25 1 3.5346 1.7701 0.0321 26 1 1.5615 2.4679 -1.2085 27 1 2.9853 0.9983 -1.9646 28 1 3.8123 -0.1451 -3.9781 29 1 0.6092 -4.3065 -1.1462 30 1 0.0394 -6.2497 -3.1149 31 1 1.4930 -6.7625 -2.2248 32 1 0.2471 -6.5830 -0.0881 33 1 -1.2062 -6.0703 -0.9787 34 1 -0.8543 -9.4623 0.4840 35 1 -2.0046 -8.0560 0.4831 36 1 -2.6159 -7.4726 -2.0791 37 1 -1.7219 -8.6343 -3.1525 38 1 0.9760 -2.5548 -0.7350 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_12335834.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:18 Heat of formation + Delta-G solvation = -110.074817 kcal Electronic energy + Delta-G solvation = -23416.963065 eV Core-core repulsion = 19476.627100 eV Total energy + Delta-G solvation = -3940.335965 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.117 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -49.86547 -48.60985 -41.29381 -40.02010 -39.38885 -37.65267 -36.13161 -33.28248 -32.54940 -31.41536 -27.03761 -26.73876 -26.50205 -25.02934 -23.30731 -22.62256 -21.49818 -20.54608 -19.19933 -18.70253 -18.27426 -17.83103 -17.32960 -17.00154 -16.86686 -16.56777 -16.45243 -16.33493 -15.89590 -15.72107 -15.58635 -15.34786 -14.77225 -14.58309 -14.38751 -14.17993 -13.94116 -13.81343 -13.66041 -13.39473 -13.17524 -12.70034 -12.61210 -12.54320 -12.13738 -12.10535 -11.92618 -11.32818 -11.24119 -10.93466 -10.56329 -10.45384 -10.13496 -9.83090 -5.13781 -0.54724 -0.12720 1.08202 1.47477 1.64503 1.79080 1.97310 2.45285 2.98806 3.07346 3.15009 3.19318 3.32722 3.43537 3.46663 3.55030 3.58094 3.73196 3.84127 3.97721 3.99222 4.12604 4.13862 4.29096 4.40283 4.44598 4.51136 4.61767 4.63434 4.67575 4.72727 4.79936 4.80614 4.89520 4.96811 5.00535 5.02741 5.31111 5.35159 5.49514 6.34880 6.40663 7.11946 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.071 4.071 3 Si 0.684 3.316 4 C -0.095 4.095 5 C -0.068 4.068 6 C -0.155 4.155 7 C 0.167 3.833 8 F -0.109 7.109 9 C -0.173 4.173 10 C 0.558 3.442 11 O -0.519 6.519 12 N -0.726 5.726 13 C 0.119 3.881 14 C -0.121 4.121 15 C -0.107 4.107 16 H 0.099 0.901 17 C -0.157 4.157 18 C 0.061 3.939 19 H 0.097 0.903 20 F -0.197 7.197 21 C -0.160 4.160 22 C -0.027 4.027 23 H 0.386 0.614 24 H 0.080 0.920 25 H -0.252 1.252 26 H -0.248 1.248 27 H 0.133 0.867 28 H 0.150 0.850 29 H 0.400 0.600 30 H 0.072 0.928 31 H 0.071 0.929 32 H 0.075 0.925 33 H 0.074 0.926 34 H 0.082 0.918 35 H 0.100 0.900 36 H 0.100 0.900 37 H 0.082 0.918 38 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.994 4.927 8.335 10.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.181 4.181 3 Si 0.584 3.416 4 C -0.096 4.096 5 C -0.085 4.085 6 C -0.173 4.173 7 C 0.146 3.854 8 F -0.087 7.087 9 C -0.177 4.177 10 C 0.345 3.655 11 O -0.395 6.395 12 N -0.379 5.379 13 C -0.004 4.004 14 C -0.159 4.159 15 C -0.126 4.126 16 H 0.118 0.882 17 C -0.195 4.195 18 C 0.025 3.975 19 H 0.115 0.885 20 F -0.178 7.178 21 C -0.198 4.198 22 C -0.046 4.046 23 H 0.234 0.766 24 H 0.098 0.902 25 H -0.177 1.177 26 H -0.172 1.172 27 H 0.150 0.850 28 H 0.168 0.832 29 H 0.236 0.764 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.093 0.907 33 H 0.093 0.907 34 H 0.100 0.900 35 H 0.119 0.881 36 H 0.119 0.881 37 H 0.101 0.899 38 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.098 4.702 6.563 8.341 hybrid contribution 0.032 -0.465 0.005 0.466 sum -2.067 4.237 6.567 8.084 Atomic orbital electron populations 1.86473 1.16910 1.81877 1.49974 1.24635 0.85985 1.10591 0.96923 0.95045 0.80855 0.77806 0.87856 1.19312 0.99542 0.94206 0.96500 1.20948 0.95706 0.99165 0.92709 1.21110 1.03452 0.93155 0.99625 1.17701 0.93858 0.90456 0.83373 1.91632 1.86157 1.82100 1.48848 1.20089 1.04532 0.95323 0.97758 1.17933 0.78810 0.85538 0.83222 1.90881 1.52780 1.68396 1.27463 1.45864 1.52733 1.13346 1.25917 1.21423 0.99389 0.80502 0.99078 1.21779 1.00075 0.95663 0.98336 1.22509 0.97655 0.95652 0.96773 0.88240 1.23613 0.98841 1.00205 0.96814 1.22379 0.98269 0.79866 0.96991 0.88545 1.92830 1.89103 1.44256 1.91587 1.23692 0.97997 0.98395 0.99696 1.20992 0.95342 0.93577 0.94709 0.76621 0.90221 1.17703 1.17242 0.84968 0.83237 0.76422 0.90974 0.91024 0.90673 0.90725 0.89968 0.88147 0.88144 0.89942 0.84146 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.33 12.74 -35.23 -0.45 0.89 16 2 C -0.07 0.18 2.81 36.01 0.10 0.28 16 3 Si 0.68 -2.08 29.78 -169.99 -5.06 -7.14 16 4 C -0.10 -0.01 5.42 -104.68 -0.57 -0.57 16 5 C -0.07 -0.03 8.66 -39.51 -0.34 -0.38 16 6 C -0.15 -0.19 10.01 -39.56 -0.40 -0.59 16 7 C 0.17 0.59 7.29 -38.96 -0.28 0.30 16 8 F -0.11 -0.65 15.55 2.25 0.04 -0.62 16 9 C -0.17 -0.44 5.88 -104.91 -0.62 -1.06 16 10 C 0.56 2.13 7.77 -12.40 -0.10 2.04 16 11 O -0.52 -4.15 15.34 5.30 0.08 -4.07 16 12 N -0.73 -0.08 5.51 -61.30 -0.34 -0.42 16 13 C 0.12 -0.03 5.66 -4.05 -0.02 -0.06 16 14 C -0.12 0.35 5.17 -26.73 -0.14 0.21 16 15 C -0.11 0.20 3.63 -89.81 -0.33 -0.13 16 16 H 0.10 -0.08 8.13 -51.93 -0.42 -0.51 16 17 C -0.16 0.34 7.54 -25.93 -0.20 0.15 16 18 C 0.06 -0.05 5.69 -25.92 -0.15 -0.20 16 19 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 20 F -0.20 -0.54 17.38 2.25 0.04 -0.50 16 21 C -0.16 0.27 7.53 -25.92 -0.20 0.07 16 22 C -0.03 0.00 9.09 -39.19 -0.36 -0.36 16 23 H 0.39 -2.80 8.74 45.56 0.40 -2.40 16 24 H 0.08 -0.36 7.96 -51.93 -0.41 -0.77 16 25 H -0.25 0.17 7.11 56.52 0.40 0.57 16 26 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 27 H 0.13 -0.08 4.86 -52.49 -0.25 -0.34 16 28 H 0.15 -0.12 8.06 -52.49 -0.42 -0.54 16 29 H 0.40 -1.11 6.51 -40.82 -0.27 -1.38 16 30 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 31 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 32 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.07 -0.28 7.84 -51.93 -0.41 -0.68 16 34 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 35 H 0.10 -0.38 8.10 -51.93 -0.42 -0.80 16 36 H 0.10 -0.30 7.89 -51.93 -0.41 -0.71 16 37 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.14 -0.37 6.40 -52.49 -0.34 -0.71 16 LS Contribution 325.99 15.07 4.91 4.91 Total: 0.00 -9.18 325.99 -9.05 -18.23 By element: Atomic # 1 Polarization: -6.31 SS G_CDS: -4.69 Total: -11.00 kcal Atomic # 6 Polarization: 3.30 SS G_CDS: -3.58 Total: -0.28 kcal Atomic # 7 Polarization: -0.08 SS G_CDS: -0.34 Total: -0.42 kcal Atomic # 8 Polarization: -2.82 SS G_CDS: -0.37 Total: -3.18 kcal Atomic # 9 Polarization: -1.19 SS G_CDS: 0.07 Total: -1.12 kcal Atomic # 14 Polarization: -2.08 SS G_CDS: -5.06 Total: -7.14 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -9.18 -9.05 -18.23 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12335834.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.843 kcal (2) G-P(sol) polarization free energy of solvation -9.181 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.024 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.232 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.075 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds