Wall clock time and date at job start Sun Mar 7 2021 02:32:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86299 * 109.47378 * 2 1 4 4 C 1.50703 * 109.47032 * 240.00082 * 2 1 3 5 5 C 1.38425 * 119.89291 * 119.99769 * 4 2 1 6 6 C 1.38241 * 120.34117 * 180.02562 * 5 4 2 7 7 C 1.38281 * 120.11848 * 0.25735 * 6 5 4 8 8 F 1.35098 * 120.10964 * 179.72416 * 7 6 5 9 9 C 1.39865 * 119.77456 * 359.43330 * 7 6 5 10 10 C 1.47701 * 120.16455 * 180.29546 * 9 7 6 11 11 O 1.21575 * 119.99665 * 0.28976 * 10 9 7 12 12 N 1.34776 * 120.00261 * 180.28817 * 10 9 7 13 13 C 1.46492 * 120.00101 * 180.02562 * 12 10 9 14 14 C 1.53001 * 109.47313 * 180.02562 * 13 12 10 15 15 C 1.52999 * 109.47357 * 179.97438 * 14 13 12 16 16 H 1.09003 * 112.84841 * 43.80101 * 15 14 13 17 17 C 1.53779 * 113.61485 * 174.99607 * 15 14 13 18 18 C 1.53771 * 87.08356 * 139.98105 * 17 15 14 19 19 H 1.09001 * 113.61767 * 219.93669 * 18 17 15 20 20 F 1.39900 * 113.61453 * 89.11457 * 18 17 15 21 21 C 1.53778 * 113.61466 * 272.49302 * 15 14 13 22 22 C 1.37895 * 119.89356 * 299.98284 * 4 2 1 23 23 H 0.96701 * 114.00278 * 299.99745 * 1 2 3 24 24 H 1.09002 * 109.47535 * 120.00576 * 2 1 3 25 25 H 1.48499 * 109.99889 * 178.68106 * 3 2 1 26 26 H 1.48498 * 110.00029 * 300.00139 * 3 2 1 27 27 H 1.07997 * 119.82475 * 0.02562 * 5 4 2 28 28 H 1.08002 * 119.93775 * 179.97438 * 6 5 4 29 29 H 0.97002 * 119.99733 * 0.02562 * 12 10 9 30 30 H 1.08998 * 109.47081 * 299.99910 * 13 12 10 31 31 H 1.08995 * 109.47345 * 60.00054 * 13 12 10 32 32 H 1.09004 * 109.46688 * 300.00274 * 14 13 12 33 33 H 1.09000 * 109.47157 * 59.99111 * 14 13 12 34 34 H 1.09003 * 113.61759 * 254.53253 * 17 15 14 35 35 H 1.09005 * 113.61288 * 25.43087 * 17 15 14 36 36 H 1.08994 * 113.61517 * 334.56990 * 21 15 14 37 37 H 1.08999 * 113.61371 * 105.46909 * 21 15 14 38 38 H 1.08002 * 120.05967 * 0.02562 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7269 -0.0355 -2.1402 6 6 3.1923 -0.6780 -3.2724 7 6 2.8606 -2.0000 -3.5058 8 9 3.3110 -2.6260 -4.6150 9 6 2.0624 -2.6885 -2.5865 10 6 1.7083 -4.1027 -2.8240 11 8 2.1153 -4.6725 -3.8178 12 7 0.9341 -4.7613 -1.9390 13 6 0.5834 -6.1641 -2.1743 14 6 -0.2966 -6.6688 -1.0290 15 6 -0.6634 -8.1336 -1.2750 16 1 0.1836 -8.7312 -1.6121 17 6 -1.4481 -8.7748 -0.1183 18 6 -2.3020 -9.4740 -1.1892 19 1 -3.3633 -9.5137 -0.9440 20 9 -1.7910 -10.7121 -1.5930 21 6 -1.9282 -8.3167 -2.1304 22 6 1.5970 -2.0307 -1.4464 23 1 -0.3934 0.4417 0.7651 24 1 1.7923 -0.5139 0.8899 25 1 3.5346 1.7701 0.0321 26 1 1.5615 2.4679 -1.2085 27 1 2.9853 0.9983 -1.9646 28 1 3.8123 -0.1451 -3.9781 29 1 0.6092 -4.3065 -1.1462 30 1 0.0394 -6.2497 -3.1149 31 1 1.4930 -6.7625 -2.2248 32 1 0.2471 -6.5830 -0.0881 33 1 -1.2062 -6.0703 -0.9787 34 1 -0.8543 -9.4623 0.4840 35 1 -2.0046 -8.0560 0.4831 36 1 -2.6159 -7.4726 -2.0791 37 1 -1.7219 -8.6343 -3.1525 38 1 0.9760 -2.5548 -0.7350 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_12335834.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:17 Heat of formation + Delta-G solvation = -109.792984 kcal Electronic energy + Delta-G solvation = -23416.950843 eV Core-core repulsion = 19476.627100 eV Total energy + Delta-G solvation = -3940.323744 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.117 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -50.15310 -48.67621 -41.43977 -40.06376 -39.33742 -37.44640 -36.29029 -33.35905 -32.54822 -31.38696 -26.91068 -26.65851 -26.48610 -25.06675 -23.25562 -22.64494 -21.61483 -20.43734 -19.32082 -18.60433 -18.24539 -17.91782 -17.29265 -17.13595 -16.89847 -16.64432 -16.46060 -16.43357 -15.96838 -15.79663 -15.49331 -15.38080 -14.79274 -14.62174 -14.49077 -14.10352 -13.96283 -13.81921 -13.53921 -13.40915 -13.11903 -12.69513 -12.57612 -12.48896 -12.01116 -11.96610 -11.82253 -11.36681 -11.18761 -10.96254 -10.58896 -10.38989 -10.22532 -9.87839 -4.90448 -0.66884 -0.17724 1.31029 1.47274 1.69230 1.86926 1.99818 2.33219 2.88574 3.22796 3.25742 3.28570 3.34989 3.43976 3.60232 3.64737 3.71362 3.85803 3.89046 4.06521 4.09188 4.20971 4.25142 4.41462 4.50276 4.57776 4.63785 4.65597 4.72750 4.74268 4.75171 4.82175 4.92256 4.99542 5.02091 5.08939 5.16651 5.25331 5.42183 5.49258 6.28585 6.94949 6.96680 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.071 4.071 3 Si 0.764 3.236 4 C -0.100 4.100 5 C -0.075 4.075 6 C -0.154 4.154 7 C 0.132 3.868 8 F -0.134 7.134 9 C -0.183 4.183 10 C 0.552 3.448 11 O -0.573 6.573 12 N -0.705 5.705 13 C 0.118 3.882 14 C -0.106 4.106 15 C -0.110 4.110 16 H 0.081 0.919 17 C -0.146 4.146 18 C 0.044 3.956 19 H 0.114 0.886 20 F -0.222 7.222 21 C -0.159 4.159 22 C -0.018 4.018 23 H 0.408 0.592 24 H 0.111 0.889 25 H -0.286 1.286 26 H -0.297 1.297 27 H 0.141 0.859 28 H 0.163 0.837 29 H 0.417 0.583 30 H 0.057 0.943 31 H 0.055 0.945 32 H 0.090 0.910 33 H 0.094 0.906 34 H 0.074 0.926 35 H 0.125 0.875 36 H 0.121 0.879 37 H 0.065 0.935 38 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.423 6.031 11.143 13.421 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.181 4.181 3 Si 0.670 3.330 4 C -0.100 4.100 5 C -0.092 4.092 6 C -0.173 4.173 7 C 0.112 3.888 8 F -0.112 7.112 9 C -0.188 4.188 10 C 0.340 3.660 11 O -0.453 6.453 12 N -0.358 5.358 13 C -0.005 4.005 14 C -0.144 4.144 15 C -0.129 4.129 16 H 0.099 0.901 17 C -0.183 4.183 18 C 0.008 3.992 19 H 0.131 0.869 20 F -0.203 7.203 21 C -0.196 4.196 22 C -0.037 4.037 23 H 0.260 0.740 24 H 0.129 0.871 25 H -0.213 1.213 26 H -0.224 1.224 27 H 0.158 0.842 28 H 0.180 0.820 29 H 0.256 0.744 30 H 0.076 0.924 31 H 0.073 0.927 32 H 0.108 0.892 33 H 0.113 0.887 34 H 0.093 0.907 35 H 0.144 0.856 36 H 0.139 0.861 37 H 0.084 0.916 38 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges -3.569 5.811 9.450 11.653 hybrid contribution 0.452 -0.733 -0.854 1.212 sum -3.117 5.078 8.596 10.459 Atomic orbital electron populations 1.86423 1.16520 1.82407 1.51762 1.24670 0.86410 1.10437 0.96576 0.94162 0.77659 0.75833 0.85341 1.19765 0.98656 0.94378 0.97194 1.21179 0.95818 0.99630 0.92620 1.21269 1.03370 0.92389 1.00243 1.18103 0.95604 0.91555 0.83541 1.91561 1.86759 1.82688 1.50191 1.20146 1.05061 0.94819 0.98725 1.18252 0.78694 0.86102 0.82956 1.90848 1.55102 1.69581 1.29808 1.45741 1.51135 1.13338 1.25570 1.21450 0.99090 0.80084 0.99894 1.21704 1.00381 0.94833 0.97477 1.22472 0.97092 0.96192 0.97130 0.90101 1.23608 0.98320 1.00122 0.96283 1.22742 0.99466 0.79000 0.98028 0.86866 1.92775 1.89530 1.46067 1.91968 1.23738 0.98530 0.98711 0.98642 1.21274 0.94788 0.93609 0.93987 0.74033 0.87117 1.21279 1.22444 0.84181 0.81984 0.74375 0.92425 0.92662 0.89154 0.88702 0.90674 0.85634 0.86120 0.91622 0.81051 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 4.46 12.74 -148.98 -1.90 2.56 16 2 C -0.07 0.55 2.81 71.24 0.20 0.75 16 3 Si 0.76 -5.55 29.78 68.60 2.04 -3.51 16 4 C -0.10 0.12 5.42 -19.90 -0.11 0.01 16 5 C -0.07 -0.08 8.66 22.32 0.19 0.12 16 6 C -0.15 -0.56 10.01 22.28 0.22 -0.34 16 7 C 0.13 1.19 7.29 22.67 0.17 1.36 16 8 F -0.13 -2.04 15.55 44.97 0.70 -1.35 16 9 C -0.18 -1.09 5.88 -20.05 -0.12 -1.21 16 10 C 0.55 4.96 7.77 86.74 0.67 5.63 16 11 O -0.57 -10.87 15.34 -3.95 -0.06 -10.93 16 12 N -0.70 0.04 5.51 -466.13 -2.57 -2.53 16 13 C 0.12 -0.01 5.66 86.38 0.49 0.48 16 14 C -0.11 0.77 5.17 30.59 0.16 0.93 16 15 C -0.11 0.44 3.63 -10.27 -0.04 0.40 16 16 H 0.08 -0.02 8.13 -2.39 -0.02 -0.04 16 17 C -0.15 0.81 7.54 31.12 0.23 1.05 16 18 C 0.04 -0.08 5.69 31.12 0.18 0.10 16 19 H 0.11 -0.62 8.14 -2.39 -0.02 -0.64 16 20 F -0.22 -1.48 17.38 44.97 0.78 -0.69 16 21 C -0.16 0.55 7.53 31.12 0.23 0.78 16 22 C -0.02 0.02 9.09 22.52 0.20 0.23 16 23 H 0.41 -7.31 8.74 -74.06 -0.65 -7.96 16 24 H 0.11 -1.46 7.96 -2.39 -0.02 -1.48 16 25 H -0.29 0.50 7.11 99.48 0.71 1.20 16 26 H -0.30 -0.25 7.11 99.48 0.71 0.45 16 27 H 0.14 -0.17 4.86 -2.91 -0.01 -0.18 16 28 H 0.16 -0.04 8.06 -2.91 -0.02 -0.06 16 29 H 0.42 -3.18 6.51 -92.71 -0.60 -3.78 16 30 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 31 H 0.05 0.19 8.14 -2.39 -0.02 0.17 16 32 H 0.09 -0.87 8.14 -2.39 -0.02 -0.88 16 33 H 0.09 -1.00 7.84 -2.39 -0.02 -1.02 16 34 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 35 H 0.13 -1.32 8.10 -2.38 -0.02 -1.34 16 36 H 0.12 -0.92 7.89 -2.39 -0.02 -0.94 16 37 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 38 H 0.17 -1.44 6.40 -2.91 -0.02 -1.46 16 Total: 0.00 -25.84 325.99 1.58 -24.26 By element: Atomic # 1 Polarization: -18.00 SS G_CDS: -0.10 Total: -18.10 kcal Atomic # 6 Polarization: 7.60 SS G_CDS: 2.69 Total: 10.29 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -2.57 Total: -2.53 kcal Atomic # 8 Polarization: -6.42 SS G_CDS: -1.96 Total: -8.38 kcal Atomic # 9 Polarization: -3.52 SS G_CDS: 1.48 Total: -2.04 kcal Atomic # 14 Polarization: -5.55 SS G_CDS: 2.04 Total: -3.51 kcal Total: -25.84 1.58 -24.26 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12335834.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.533 kcal (2) G-P(sol) polarization free energy of solvation -25.845 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.377 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.584 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.260 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.793 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds