Wall clock time and date at job start Sun Mar 7 2021 02:32:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86299 * 109.47225 * 2 1 4 4 C 1.50701 * 109.47238 * 239.99746 * 2 1 3 5 5 C 1.38234 * 120.00243 * 300.00147 * 4 2 1 6 6 C 1.38234 * 120.00240 * 180.02562 * 5 4 2 7 7 C 1.38233 * 120.00037 * 0.26327 * 6 5 4 8 8 C 1.50693 * 120.00207 * 179.72405 * 7 6 5 9 9 C 1.50709 * 109.47444 * 89.99457 * 8 7 6 10 10 O 1.21276 * 119.99531 * 0.02562 * 9 8 7 11 11 N 1.34771 * 120.00247 * 180.02562 * 9 8 7 12 12 C 1.46497 * 119.99945 * 180.02562 * 11 9 8 13 13 C 1.53003 * 109.47029 * 180.02562 * 12 11 9 14 14 C 1.52995 * 109.46937 * 180.02562 * 13 12 11 15 15 H 1.09004 * 112.85123 * 314.65782 * 14 13 12 16 16 C 1.53781 * 113.61941 * 85.86089 * 14 13 12 17 17 C 1.53954 * 87.01998 * 139.94899 * 16 14 13 18 18 H 1.09006 * 113.66685 * 220.06971 * 17 16 14 19 19 F 1.39899 * 113.61439 * 89.20195 * 17 16 14 20 20 C 1.53780 * 87.11480 * 334.63910 * 17 16 14 21 21 C 1.38238 * 119.99752 * 359.47832 * 7 6 5 22 22 C 1.38234 * 120.00005 * 0.52168 * 21 7 6 23 23 H 0.96706 * 113.99930 * 59.99823 * 1 2 3 24 24 H 1.08998 * 109.46821 * 119.99805 * 2 1 3 25 25 H 1.48499 * 110.00215 * 59.99963 * 3 2 1 26 26 H 1.48500 * 109.99921 * 181.32050 * 3 2 1 27 27 H 1.07999 * 119.99751 * 359.97438 * 5 4 2 28 28 H 1.08002 * 119.99744 * 179.97438 * 6 5 4 29 29 H 1.09000 * 109.47097 * 209.99342 * 8 7 6 30 30 H 1.09001 * 109.47081 * 329.99847 * 8 7 6 31 31 H 0.97006 * 119.99744 * 359.97438 * 11 9 8 32 32 H 1.09000 * 109.46784 * 299.99416 * 12 11 9 33 33 H 1.08993 * 109.47321 * 59.99709 * 12 11 9 34 34 H 1.09004 * 109.46766 * 299.99850 * 13 12 11 35 35 H 1.08998 * 109.47224 * 59.99216 * 13 12 11 36 36 H 1.08995 * 113.61515 * 254.52899 * 16 14 13 37 37 H 1.09004 * 113.60985 * 25.43321 * 16 14 13 38 38 H 1.09000 * 113.61314 * 270.81179 * 20 17 16 39 39 H 1.08996 * 113.61428 * 139.91074 * 20 17 16 40 40 H 1.07999 * 119.99927 * 180.24100 * 21 7 6 41 41 H 1.08001 * 120.00310 * 179.72165 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.5974 -2.0339 -1.4492 6 6 2.0586 -2.6857 -2.5776 7 6 2.8583 -2.0158 -3.4845 8 6 3.3663 -2.7281 -4.7114 9 6 2.3793 -2.5558 -5.8372 10 8 1.3636 -1.9170 -5.6606 11 7 2.6252 -3.1116 -7.0401 12 6 1.6660 -2.9436 -8.1345 13 6 2.1811 -3.6681 -9.3798 14 6 1.1796 -3.4921 -10.5230 15 1 0.1480 -3.6544 -10.2107 16 6 1.3834 -2.1969 -11.3267 17 6 1.0784 -3.0263 -12.5874 18 1 1.7102 -2.7756 -13.4395 19 9 -0.2813 -3.0705 -12.9136 20 6 1.5636 -4.2558 -11.8014 21 6 3.1879 -0.6907 -3.2684 22 6 2.7266 -0.0389 -2.1401 23 1 -0.3933 0.4418 -0.7651 24 1 1.7922 -0.5138 0.8900 25 1 1.5615 2.4679 1.2085 26 1 3.5346 1.7702 -0.0322 27 1 0.9768 -2.5589 -0.7381 28 1 1.7980 -3.7199 -2.7482 29 1 4.3282 -2.3070 -5.0039 30 1 3.4856 -3.7892 -4.4922 31 1 3.4378 -3.6223 -7.1813 32 1 0.7038 -3.3640 -7.8420 33 1 1.5473 -1.8826 -8.3540 34 1 3.1435 -3.2481 -9.6724 35 1 2.2995 -4.7291 -9.1600 36 1 0.6376 -1.4305 -11.1161 37 1 2.4044 -1.8168 -11.2906 38 1 2.6339 -4.4395 -11.8954 39 1 0.9631 -5.1489 -11.9735 40 1 3.8094 -0.1661 -3.9789 41 1 2.9878 0.9950 -1.9690 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_12335836.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:22 Heat of formation + Delta-G solvation = -77.429335 kcal Electronic energy + Delta-G solvation = -22445.013938 eV Core-core repulsion = 18820.009943 eV Total energy + Delta-G solvation = -3625.003994 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.142 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -48.62435 -41.13985 -40.15839 -39.43776 -37.59409 -36.04409 -34.06169 -32.03034 -31.88129 -29.64660 -27.03736 -26.38912 -25.17954 -23.77319 -23.00534 -22.18132 -21.30333 -20.54486 -18.41513 -18.11352 -17.46859 -17.20783 -17.06431 -16.73125 -16.64824 -16.22648 -16.09023 -15.92183 -15.74076 -15.34878 -14.87653 -14.66188 -14.57175 -14.46182 -13.96390 -13.84478 -13.69565 -13.31029 -13.23738 -13.08676 -12.78387 -12.60519 -12.18627 -12.14556 -11.94326 -11.89857 -11.63831 -11.34351 -11.22726 -10.84371 -10.38008 -10.11239 -9.82340 -9.56545 -4.98474 0.28189 0.50887 1.34456 1.66051 1.66643 1.99885 2.11510 2.81953 3.13120 3.18163 3.44364 3.49920 3.54500 3.59868 3.71842 3.78112 3.84865 3.89426 4.02091 4.05596 4.15486 4.24945 4.28636 4.37858 4.43672 4.49064 4.49984 4.55981 4.62977 4.66656 4.72438 4.78108 4.87824 4.96067 4.99843 5.03657 5.11054 5.33323 5.37361 5.42034 5.58830 5.62015 6.04057 6.43839 6.63250 7.22856 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.068 4.068 3 Si 0.688 3.312 4 C -0.119 4.119 5 C -0.091 4.091 6 C -0.104 4.104 7 C -0.064 4.064 8 C -0.104 4.104 9 C 0.513 3.487 10 O -0.526 6.526 11 N -0.735 5.735 12 C 0.119 3.881 13 C -0.120 4.120 14 C -0.107 4.107 15 H 0.099 0.901 16 C -0.160 4.160 17 C 0.061 3.939 18 H 0.096 0.904 19 F -0.197 7.197 20 C -0.158 4.158 21 C -0.100 4.100 22 C -0.116 4.116 23 H 0.380 0.620 24 H 0.113 0.887 25 H -0.255 1.255 26 H -0.258 1.258 27 H 0.126 0.874 28 H 0.122 0.878 29 H 0.105 0.895 30 H 0.104 0.896 31 H 0.401 0.599 32 H 0.068 0.932 33 H 0.069 0.931 34 H 0.073 0.927 35 H 0.074 0.926 36 H 0.082 0.918 37 H 0.100 0.900 38 H 0.100 0.900 39 H 0.081 0.919 40 H 0.124 0.876 41 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.220 -1.598 -3.807 6.655 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.591 3.409 4 C -0.119 4.119 5 C -0.109 4.109 6 C -0.122 4.122 7 C -0.064 4.064 8 C -0.143 4.143 9 C 0.299 3.701 10 O -0.401 6.401 11 N -0.388 5.388 12 C -0.004 4.004 13 C -0.158 4.158 14 C -0.126 4.126 15 H 0.117 0.883 16 C -0.197 4.197 17 C 0.025 3.975 18 H 0.114 0.886 19 F -0.178 7.178 20 C -0.195 4.195 21 C -0.118 4.118 22 C -0.133 4.133 23 H 0.227 0.773 24 H 0.130 0.870 25 H -0.180 1.180 26 H -0.183 1.183 27 H 0.144 0.856 28 H 0.140 0.860 29 H 0.123 0.877 30 H 0.122 0.878 31 H 0.235 0.765 32 H 0.086 0.914 33 H 0.087 0.913 34 H 0.091 0.909 35 H 0.092 0.908 36 H 0.101 0.899 37 H 0.118 0.882 38 H 0.118 0.882 39 H 0.100 0.900 40 H 0.142 0.858 41 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 5.001 -0.836 -2.706 5.747 hybrid contribution 0.419 -0.963 -0.054 1.052 sum 5.420 -1.798 -2.760 6.343 Atomic orbital electron populations 1.86488 1.17078 1.81754 1.49301 1.25048 0.85298 1.10074 0.97505 0.94605 0.80878 0.78365 0.87080 1.20329 0.99203 0.95319 0.97065 1.20955 0.98750 0.93856 0.97352 1.21017 0.96955 1.00034 0.94164 1.19266 0.98162 0.94240 0.94752 1.20694 0.98920 1.02916 0.91809 1.20569 0.87396 0.78968 0.83211 1.90762 1.27573 1.39493 1.82306 1.46036 1.25169 1.55990 1.11610 1.21359 0.92547 1.01119 0.85422 1.21767 0.99017 1.01217 0.93796 1.22512 1.00306 0.96230 0.93560 0.88307 1.23712 1.03652 0.97502 0.94865 1.22419 0.78389 0.98767 0.97952 0.88567 1.92830 1.33845 1.97120 1.93970 1.23613 1.02830 0.97738 0.95346 1.20903 0.99975 0.93793 0.97097 1.20941 0.98493 0.99235 0.94666 0.77265 0.86995 1.18023 1.18335 0.85616 0.86013 0.87719 0.87753 0.76525 0.91382 0.91285 0.90861 0.90768 0.89943 0.88194 0.88180 0.89979 0.85810 0.85660 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.86 12.77 -35.23 -0.45 -1.31 16 2 C -0.07 -0.07 2.82 36.01 0.10 0.04 16 3 Si 0.69 -0.05 29.79 -169.99 -5.06 -5.12 16 4 C -0.12 -0.18 5.39 -104.62 -0.56 -0.75 16 5 C -0.09 -0.18 9.61 -39.58 -0.38 -0.56 16 6 C -0.10 -0.15 9.70 -39.58 -0.38 -0.54 16 7 C -0.06 -0.06 4.37 -104.63 -0.46 -0.52 16 8 C -0.10 0.19 5.83 -29.03 -0.17 0.02 16 9 C 0.51 0.37 7.82 -10.98 -0.09 0.29 16 10 O -0.53 -2.85 16.03 5.56 0.09 -2.76 16 11 N -0.74 1.44 5.56 -60.30 -0.33 1.11 16 12 C 0.12 -0.16 5.67 -4.04 -0.02 -0.19 16 13 C -0.12 0.43 5.15 -26.73 -0.14 0.29 16 14 C -0.11 0.25 3.62 -89.81 -0.32 -0.07 16 15 H 0.10 -0.12 8.14 -51.93 -0.42 -0.54 16 16 C -0.16 0.35 7.54 -25.83 -0.19 0.15 16 17 C 0.06 -0.07 5.69 -25.83 -0.15 -0.22 16 18 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 19 F -0.20 -0.47 17.38 2.25 0.04 -0.43 16 20 C -0.16 0.39 7.54 -25.92 -0.20 0.20 16 21 C -0.10 -0.09 9.70 -39.58 -0.38 -0.48 16 22 C -0.12 -0.11 8.67 -39.58 -0.34 -0.45 16 23 H 0.38 -0.72 8.70 45.56 0.40 -0.32 16 24 H 0.11 0.13 7.96 -51.93 -0.41 -0.29 16 25 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 26 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 27 H 0.13 0.18 8.06 -52.49 -0.42 -0.24 16 28 H 0.12 0.00 8.06 -52.49 -0.42 -0.42 16 29 H 0.10 -0.42 8.09 -51.93 -0.42 -0.84 16 30 H 0.10 -0.39 8.09 -51.93 -0.42 -0.81 16 31 H 0.40 -1.98 8.47 -40.82 -0.35 -2.33 16 32 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 34 H 0.07 -0.32 7.87 -51.93 -0.41 -0.73 16 35 H 0.07 -0.29 8.14 -51.93 -0.42 -0.72 16 36 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.10 -0.36 7.92 -51.93 -0.41 -0.77 16 38 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16 39 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 41 H 0.13 -0.11 4.88 -52.49 -0.26 -0.36 16 LS Contribution 346.12 15.07 5.22 5.22 Total: 0.00 -8.58 346.12 -10.32 -18.90 By element: Atomic # 1 Polarization: -6.70 SS G_CDS: -6.12 Total: -12.82 kcal Atomic # 6 Polarization: 0.90 SS G_CDS: -3.69 Total: -2.79 kcal Atomic # 7 Polarization: 1.44 SS G_CDS: -0.33 Total: 1.11 kcal Atomic # 8 Polarization: -3.71 SS G_CDS: -0.36 Total: -4.07 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.04 Total: -0.43 kcal Atomic # 14 Polarization: -0.05 SS G_CDS: -5.06 Total: -5.12 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -8.58 -10.32 -18.90 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12335836.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.528 kcal (2) G-P(sol) polarization free energy of solvation -8.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.111 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.318 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.901 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.429 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds