Wall clock time and date at job start Sun Mar 7 2021 02:32:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47020 * 2 1 4 4 C 1.50699 * 109.46818 * 119.99890 * 2 1 3 5 5 C 1.38315 * 119.92359 * 244.97696 * 4 2 1 6 6 C 1.38461 * 120.28510 * 180.02562 * 5 4 2 7 7 Br 1.89097 * 119.94045 * 180.02562 * 6 5 4 8 8 C 1.38031 * 120.12312 * 359.72471 * 6 5 4 9 9 C 1.39586 * 119.84146 * 0.57081 * 8 6 5 10 10 C 1.47853 * 120.14147 * 179.69954 * 9 8 6 11 11 O 1.21551 * 120.00244 * 179.72670 * 10 9 8 12 12 N 1.34775 * 119.99840 * 359.72879 * 10 9 8 13 13 C 1.46502 * 119.99982 * 179.97438 * 12 10 9 14 14 C 1.53003 * 109.47117 * 180.02562 * 13 12 10 15 15 C 1.52994 * 109.46905 * 180.02562 * 14 13 12 16 16 H 1.09002 * 112.90771 * 316.25047 * 15 14 13 17 17 C 1.53779 * 113.61529 * 87.50451 * 15 14 13 18 18 C 1.53779 * 87.08402 * 139.98073 * 17 15 14 19 19 H 1.08997 * 113.61646 * 220.02209 * 18 17 15 20 20 F 1.39899 * 113.69427 * 89.12595 * 18 17 15 21 21 C 1.53784 * 113.61233 * 185.00038 * 15 14 13 22 22 C 1.37991 * 119.91980 * 65.00441 * 4 2 1 23 23 H 0.96706 * 114.00335 * 300.00064 * 1 2 3 24 24 H 1.08995 * 109.47268 * 240.00076 * 2 1 3 25 25 H 1.48496 * 109.99765 * 178.67799 * 3 2 1 26 26 H 1.48496 * 110.00298 * 300.00116 * 3 2 1 27 27 H 1.08002 * 119.85680 * 359.97438 * 5 4 2 28 28 H 1.08000 * 120.08028 * 180.27810 * 8 6 5 29 29 H 0.97004 * 119.99989 * 0.02562 * 12 10 9 30 30 H 1.09000 * 109.46536 * 60.00477 * 13 12 10 31 31 H 1.08996 * 109.46809 * 300.00279 * 13 12 10 32 32 H 1.08994 * 109.46694 * 60.00154 * 14 13 12 33 33 H 1.09001 * 109.46897 * 300.00518 * 14 13 12 34 34 H 1.09006 * 113.61307 * 25.43275 * 17 15 14 35 35 H 1.09007 * 113.61642 * 254.53032 * 17 15 14 36 36 H 1.09004 * 113.61451 * 105.47254 * 21 15 14 37 37 H 1.08994 * 113.61477 * 334.56556 * 21 15 14 38 38 H 1.07998 * 120.06064 * 359.97149 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6393 -0.0104 2.1906 6 6 3.1047 -0.6558 3.3238 7 35 4.0710 0.3108 4.6306 8 6 2.8593 -2.0020 3.5043 9 6 2.1507 -2.7149 2.5358 10 6 1.8898 -4.1586 2.7193 11 8 1.2681 -4.7758 1.8766 12 7 2.3412 -4.7903 3.8209 13 6 2.0822 -6.2207 4.0030 14 6 2.6967 -6.6860 5.3247 15 6 2.4267 -8.1799 5.5145 16 1 1.4043 -8.4617 5.2627 17 6 3.4912 -9.0848 4.8719 18 6 3.3731 -9.9765 6.1191 19 1 4.3294 -10.3625 6.4720 20 9 2.3936 -10.9694 6.0098 21 6 2.8985 -8.7233 6.8736 22 6 1.6842 -2.0578 1.3964 23 1 -0.3934 0.4417 0.7651 24 1 1.7924 -0.5138 -0.8899 25 1 3.5345 1.7703 0.0322 26 1 1.5615 2.4679 -1.2084 27 1 2.8307 1.0439 2.0554 28 1 3.2187 -2.5037 4.3906 29 1 2.8369 -4.2976 4.4936 30 1 2.5272 -6.7782 3.1788 31 1 1.0066 -6.3957 4.0212 32 1 2.2513 -6.1284 6.1486 33 1 3.7723 -6.5108 5.3069 34 1 4.4652 -8.6068 4.7675 35 1 3.1561 -9.5699 3.9550 36 1 2.0850 -8.9166 7.5729 37 1 3.7105 -8.1466 7.3164 38 1 1.1312 -2.6029 0.6457 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_12335870.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:48 Heat of formation + Delta-G solvation = -63.958562 kcal Electronic energy + Delta-G solvation = -22729.652837 eV Core-core repulsion = 18920.952595 eV Total energy + Delta-G solvation = -3808.700242 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.037 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -48.67303 -41.59865 -40.11493 -39.32717 -37.68798 -36.27955 -33.62331 -33.43852 -31.51336 -30.45912 -27.11646 -26.87029 -26.50618 -24.58648 -22.94576 -22.71869 -21.54194 -20.42200 -19.20625 -17.94309 -17.73757 -17.30058 -17.15534 -16.85790 -16.68503 -16.31694 -16.24975 -15.96531 -15.65209 -15.46659 -14.97904 -14.93446 -14.63999 -14.30031 -14.10283 -13.80539 -13.49416 -13.31319 -13.09557 -13.02826 -12.55919 -12.22942 -11.99780 -11.97110 -11.94945 -11.81493 -11.50448 -11.29349 -11.18199 -10.96301 -10.57385 -10.40561 -10.13348 -9.91773 -5.05812 -0.52940 -0.17213 0.42902 1.20872 1.49921 1.59631 1.90301 1.97964 2.45225 3.26079 3.28513 3.34073 3.36267 3.54237 3.60714 3.70829 3.80445 3.85882 3.87595 3.95614 4.09199 4.19617 4.22533 4.30204 4.42984 4.47964 4.58937 4.72313 4.74127 4.75160 4.82697 4.91395 4.92905 5.02641 5.06330 5.11757 5.18064 5.27371 5.37321 5.49808 6.33920 6.71026 7.01160 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.076 4.076 3 Si 0.773 3.227 4 C -0.117 4.117 5 C -0.059 4.059 6 C -0.099 4.099 7 Br -0.026 7.026 8 C -0.043 4.043 9 C -0.136 4.136 10 C 0.556 3.444 11 O -0.577 6.577 12 N -0.709 5.709 13 C 0.118 3.882 14 C -0.108 4.108 15 C -0.109 4.109 16 H 0.082 0.918 17 C -0.158 4.158 18 C 0.043 3.957 19 H 0.112 0.888 20 F -0.222 7.222 21 C -0.148 4.148 22 C -0.032 4.032 23 H 0.397 0.603 24 H 0.111 0.889 25 H -0.277 1.277 26 H -0.294 1.294 27 H 0.159 0.841 28 H 0.164 0.836 29 H 0.416 0.584 30 H 0.059 0.941 31 H 0.056 0.944 32 H 0.088 0.912 33 H 0.093 0.907 34 H 0.120 0.880 35 H 0.066 0.934 36 H 0.074 0.926 37 H 0.124 0.876 38 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.972 4.315 6.551 8.793 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.186 4.186 3 Si 0.677 3.323 4 C -0.118 4.118 5 C -0.078 4.078 6 C -0.178 4.178 7 Br 0.060 6.940 8 C -0.063 4.063 9 C -0.140 4.140 10 C 0.344 3.656 11 O -0.457 6.457 12 N -0.362 5.362 13 C -0.005 4.005 14 C -0.146 4.146 15 C -0.128 4.128 16 H 0.100 0.900 17 C -0.195 4.195 18 C 0.007 3.993 19 H 0.130 0.870 20 F -0.203 7.203 21 C -0.185 4.185 22 C -0.051 4.051 23 H 0.247 0.753 24 H 0.129 0.871 25 H -0.203 1.203 26 H -0.222 1.222 27 H 0.176 0.824 28 H 0.182 0.818 29 H 0.254 0.746 30 H 0.078 0.922 31 H 0.074 0.926 32 H 0.107 0.893 33 H 0.112 0.888 34 H 0.139 0.861 35 H 0.085 0.915 36 H 0.093 0.907 37 H 0.142 0.858 38 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 4.442 4.455 5.523 8.372 hybrid contribution -0.289 -1.077 -0.595 1.264 sum 4.154 3.378 4.928 7.277 Atomic orbital electron populations 1.86517 1.16885 1.82172 1.50538 1.25273 0.85593 1.11149 0.96536 0.93870 0.78315 0.74585 0.85495 1.20336 0.99953 0.93957 0.97569 1.21376 0.94442 1.00608 0.91406 1.21750 1.04010 0.95307 0.96781 1.96866 1.72249 1.73417 1.51464 1.21470 0.94262 0.92241 0.98354 1.19865 1.03764 0.93060 0.97328 1.18398 0.78550 0.86941 0.81740 1.90807 1.42273 1.68285 1.44374 1.45817 1.56920 1.11147 1.22270 1.21437 1.00555 0.79529 0.99000 1.21707 1.02596 0.94740 0.95523 1.22467 0.99225 0.94446 0.96650 0.89990 1.23734 1.01528 0.97296 0.96968 1.22739 0.90303 0.86249 1.00014 0.87003 1.92775 1.66080 1.64419 1.97026 1.23616 1.02933 0.95342 0.96612 1.21264 0.94215 0.93843 0.95788 0.75270 0.87130 1.20288 1.22185 0.82399 0.81812 0.74551 0.92236 0.92558 0.89322 0.88805 0.86146 0.91482 0.90736 0.85787 0.85396 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.05 12.83 -148.98 -1.91 -1.86 16 2 C -0.08 0.11 2.80 71.24 0.20 0.31 16 3 Si 0.77 -2.95 29.79 68.60 2.04 -0.91 16 4 C -0.12 0.13 5.35 -19.90 -0.11 0.03 16 5 C -0.06 0.22 8.41 22.34 0.19 0.41 16 6 C -0.10 0.35 6.22 22.27 0.14 0.49 16 7 Br -0.03 0.11 33.69 -20.37 -0.69 -0.58 16 8 C -0.04 0.18 9.28 22.55 0.21 0.39 16 9 C -0.14 -0.15 5.87 -20.09 -0.12 -0.27 16 10 C 0.56 2.61 7.77 86.79 0.67 3.28 16 11 O -0.58 -8.16 16.35 -3.88 -0.06 -8.23 16 12 N -0.71 1.91 5.51 -465.96 -2.57 -0.65 16 13 C 0.12 -0.26 5.67 86.38 0.49 0.23 16 14 C -0.11 0.90 5.17 30.59 0.16 1.06 16 15 C -0.11 0.53 3.63 -10.27 -0.04 0.49 16 16 H 0.08 -0.11 8.13 -2.39 -0.02 -0.13 16 17 C -0.16 0.68 7.53 31.12 0.23 0.92 16 18 C 0.04 -0.10 5.69 31.12 0.18 0.08 16 19 H 0.11 -0.65 8.14 -2.39 -0.02 -0.67 16 20 F -0.22 -1.36 17.39 44.97 0.78 -0.57 16 21 C -0.15 0.87 7.54 31.12 0.23 1.10 16 22 C -0.03 -0.09 9.23 22.53 0.21 0.12 16 23 H 0.40 -3.44 8.70 -74.05 -0.64 -4.08 16 24 H 0.11 0.01 7.96 -2.39 -0.02 -0.01 16 25 H -0.28 -0.05 7.11 99.48 0.71 0.66 16 26 H -0.29 -1.15 7.11 99.48 0.71 -0.45 16 27 H 0.16 -1.19 4.89 -2.91 -0.01 -1.20 16 28 H 0.16 -1.67 6.41 -2.91 -0.02 -1.68 16 29 H 0.42 -3.99 6.51 -92.71 -0.60 -4.60 16 30 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 31 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 32 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 33 H 0.09 -1.08 7.84 -2.39 -0.02 -1.10 16 34 H 0.12 -1.02 7.90 -2.38 -0.02 -1.04 16 35 H 0.07 -0.08 8.14 -2.38 -0.02 -0.09 16 36 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 37 H 0.12 -1.31 8.10 -2.39 -0.02 -1.33 16 38 H 0.13 0.84 7.65 -2.91 -0.02 0.81 16 Total: 0.00 -20.38 342.83 0.15 -20.23 By element: Atomic # 1 Polarization: -15.97 SS G_CDS: -0.10 Total: -16.07 kcal Atomic # 6 Polarization: 5.99 SS G_CDS: 2.65 Total: 8.64 kcal Atomic # 7 Polarization: 1.91 SS G_CDS: -2.57 Total: -0.65 kcal Atomic # 8 Polarization: -8.12 SS G_CDS: -1.98 Total: -10.09 kcal Atomic # 9 Polarization: -1.36 SS G_CDS: 0.78 Total: -0.57 kcal Atomic # 14 Polarization: -2.95 SS G_CDS: 2.04 Total: -0.91 kcal Atomic # 35 Polarization: 0.11 SS G_CDS: -0.69 Total: -0.58 kcal Total: -20.38 0.15 -20.23 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12335870.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.729 kcal (2) G-P(sol) polarization free energy of solvation -20.376 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.105 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.147 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.230 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.959 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds