Wall clock time and date at job start Sun Mar 7 2021 02:32:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 C 1.53001 * 109.46790 * 2 1 4 4 C 1.53004 * 109.47020 * 189.34390 * 3 2 1 5 5 C 1.52997 * 109.47096 * 69.34324 * 3 2 1 6 6 C 1.50695 * 109.47162 * 186.93668 * 5 3 2 7 7 O 1.21283 * 119.99996 * 246.75331 * 6 5 3 8 8 N 1.34777 * 120.00232 * 66.75397 * 6 5 3 9 9 C 1.46496 * 120.00294 * 174.98535 * 8 6 5 10 10 C 1.52998 * 109.47113 * 179.97438 * 9 8 6 11 11 C 1.53002 * 109.47237 * 180.02562 * 10 9 8 12 12 H 1.09003 * 112.90572 * 316.25201 * 11 10 9 13 13 C 1.53947 * 113.67120 * 87.54895 * 11 10 9 14 14 C 1.53779 * 87.11199 * 139.89232 * 13 11 10 15 15 H 1.09005 * 113.69069 * 220.07619 * 14 13 11 16 16 F 1.39898 * 113.61371 * 89.19024 * 14 13 11 17 17 C 1.53778 * 113.61513 * 185.00419 * 11 10 9 18 18 N 1.46507 * 109.47034 * 66.93692 * 5 3 2 19 19 C 1.36342 * 125.63257 * 57.10060 * 18 5 3 20 20 C 1.34852 * 108.21585 * 179.82938 * 19 18 5 21 21 C 1.40900 * 107.41517 * 0.42332 * 20 19 18 22 22 C 1.34851 * 107.41544 * 359.73822 * 21 20 19 23 23 C 1.50696 * 125.88716 * 180.02562 * 22 21 20 24 24 O 1.42899 * 109.47252 * 221.92954 * 23 22 21 25 25 Si 1.86305 * 109.47252 * 341.93057 * 23 22 21 26 26 H 1.09002 * 109.47214 * 311.16967 * 1 2 3 27 27 H 1.09004 * 109.46789 * 71.17296 * 1 2 3 28 28 H 1.09006 * 109.46911 * 191.16685 * 1 2 3 29 29 H 1.09001 * 109.46773 * 240.00577 * 2 1 3 30 30 H 1.08996 * 109.47169 * 119.99834 * 2 1 3 31 31 H 1.09004 * 109.47432 * 309.34258 * 3 2 1 32 32 H 1.09001 * 109.46694 * 312.08074 * 4 3 2 33 33 H 1.09000 * 109.46843 * 72.08415 * 4 3 2 34 34 H 1.08995 * 109.46973 * 192.08047 * 4 3 2 35 35 H 1.09000 * 109.47400 * 306.93701 * 5 3 2 36 36 H 0.97003 * 119.99894 * 354.98773 * 8 6 5 37 37 H 1.09008 * 109.47305 * 60.00072 * 9 8 6 38 38 H 1.09003 * 109.47452 * 300.00143 * 9 8 6 39 39 H 1.08997 * 109.46992 * 60.00464 * 10 9 8 40 40 H 1.09000 * 109.47201 * 299.99675 * 10 9 8 41 41 H 1.09007 * 113.53537 * 25.34224 * 13 11 10 42 42 H 1.09001 * 113.74743 * 254.47563 * 13 11 10 43 43 H 1.09004 * 113.61794 * 105.46909 * 17 11 10 44 44 H 1.08994 * 113.61364 * 334.64579 * 17 11 10 45 45 H 1.07995 * 125.89446 * 0.02562 * 19 18 5 46 46 H 1.07997 * 126.29280 * 180.15693 * 20 19 18 47 47 H 1.07996 * 126.28876 * 179.72861 * 21 20 19 48 48 H 1.09001 * 109.47292 * 101.93056 * 23 22 21 49 49 H 0.96703 * 114.00281 * 179.97438 * 24 23 22 50 50 H 1.48502 * 109.99941 * 178.68230 * 25 23 22 51 51 H 1.48493 * 109.99675 * 299.99804 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 3.5520 1.4490 -0.2342 5 6 1.7302 2.0930 1.3497 6 6 2.0766 3.5584 1.2925 7 8 2.9880 3.9928 1.9645 8 7 1.3737 4.3864 0.4945 9 6 1.6370 5.8273 0.5204 10 6 0.7106 6.5329 -0.4720 11 6 0.9860 8.0377 -0.4455 12 1 1.0986 8.4306 0.5650 13 6 2.1049 8.4783 -1.4066 14 6 1.2365 9.7052 -1.7311 15 1 1.2416 9.9787 -2.7863 16 9 1.4691 10.7957 -0.8862 17 6 0.0220 8.8559 -1.3206 18 7 2.5225 1.4444 2.3976 19 6 3.8818 1.3410 2.4164 20 6 4.2392 0.6843 3.5387 21 6 3.0566 0.3623 4.2336 22 6 2.0219 0.8396 3.5123 23 6 0.5640 0.7247 3.8759 24 8 -0.1940 0.4008 2.7087 25 14 0.3456 -0.6166 5.1503 26 1 -0.3634 0.6765 0.7736 27 1 -0.3633 0.3317 -0.9727 28 1 -0.3633 -1.0083 0.1990 29 1 1.8933 -0.5138 -0.8901 30 1 1.8934 -0.5138 0.8900 31 1 1.5468 2.0023 -0.7948 32 1 4.0249 0.7215 0.4255 33 1 3.7600 1.1877 -1.2718 34 1 3.9481 2.4422 -0.0232 35 1 0.6695 1.9788 1.5732 36 1 0.6934 4.0283 -0.0970 37 1 2.6747 6.0121 0.2427 38 1 1.4554 6.2119 1.5240 39 1 -0.3272 6.3482 -0.1948 40 1 0.8927 6.1483 -1.4756 41 1 2.2425 7.8047 -2.2525 42 1 3.0411 8.7260 -0.9063 43 1 -0.7242 9.4084 -0.7495 44 1 -0.4108 8.2867 -2.1432 45 1 4.5563 1.7222 1.6639 46 1 5.2465 0.4451 3.8460 47 1 2.9908 -0.1692 5.1714 48 1 0.2154 1.6735 4.2837 49 1 -1.1434 0.3106 2.8687 50 1 -1.0835 -0.7184 5.5408 51 1 0.8172 -1.9154 4.6064 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_12360566.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:52 Heat of formation + Delta-G solvation = -40.372802 kcal Electronic energy + Delta-G solvation = -31357.346421 eV Core-core repulsion = 27174.599072 eV Total energy + Delta-G solvation = -4182.747349 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.200 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -48.64705 -42.71966 -40.60665 -39.51616 -37.91722 -37.64597 -36.16560 -33.00769 -31.99188 -31.52303 -30.64575 -28.31728 -27.03577 -25.99695 -25.62645 -24.64348 -23.05791 -22.15257 -21.63322 -21.32358 -20.60023 -19.86810 -18.82868 -18.46250 -17.66860 -17.29653 -16.98838 -16.95107 -16.56099 -16.35490 -16.01780 -15.93655 -15.50056 -15.46053 -15.15787 -14.83477 -14.50760 -14.41706 -14.30798 -14.08631 -13.86605 -13.83711 -13.65702 -13.42501 -13.25490 -13.20167 -13.03580 -12.82343 -12.70885 -12.60318 -12.19862 -12.17935 -11.97619 -11.91666 -11.83936 -11.73433 -11.54051 -11.36919 -11.25018 -10.87105 -10.62636 -10.21305 -9.33346 -8.68206 -4.87022 1.17116 1.37386 1.48881 1.64291 1.89329 2.04173 2.27349 2.36458 3.09198 3.10610 3.14631 3.36746 3.41131 3.52333 3.56171 3.67772 3.71618 3.78566 3.90170 3.97421 4.07581 4.20807 4.23717 4.30304 4.38803 4.39066 4.41255 4.46327 4.49203 4.58617 4.60886 4.62982 4.68395 4.73839 4.76750 4.84557 4.84977 4.90687 4.94128 4.95886 4.97866 5.13373 5.15918 5.26196 5.30458 5.32810 5.46721 5.54457 5.58050 6.18862 6.25132 6.35053 6.49157 6.60239 7.06453 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.113 4.113 3 C -0.091 4.091 4 C -0.170 4.170 5 C 0.118 3.882 6 C 0.501 3.499 7 O -0.515 6.515 8 N -0.729 5.729 9 C 0.120 3.880 10 C -0.120 4.120 11 C -0.107 4.107 12 H 0.099 0.901 13 C -0.160 4.160 14 C 0.061 3.939 15 H 0.097 0.903 16 F -0.197 7.197 17 C -0.157 4.157 18 N -0.410 5.410 19 C 0.014 3.986 20 C -0.204 4.204 21 C -0.186 4.186 22 C 0.025 3.975 23 C -0.054 4.054 24 O -0.535 6.535 25 Si 0.707 3.293 26 H 0.074 0.926 27 H 0.045 0.955 28 H 0.053 0.947 29 H 0.064 0.936 30 H 0.070 0.930 31 H 0.086 0.914 32 H 0.079 0.921 33 H 0.063 0.937 34 H 0.058 0.942 35 H 0.138 0.862 36 H 0.401 0.599 37 H 0.071 0.929 38 H 0.069 0.931 39 H 0.074 0.926 40 H 0.073 0.927 41 H 0.099 0.901 42 H 0.082 0.918 43 H 0.082 0.918 44 H 0.100 0.900 45 H 0.166 0.834 46 H 0.137 0.863 47 H 0.142 0.858 48 H 0.071 0.929 49 H 0.378 0.622 50 H -0.263 1.263 51 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.221 -0.528 -3.046 5.232 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.151 4.151 3 C -0.110 4.110 4 C -0.227 4.227 5 C 0.011 3.989 6 C 0.286 3.714 7 O -0.390 6.390 8 N -0.383 5.383 9 C -0.003 4.003 10 C -0.158 4.158 11 C -0.126 4.126 12 H 0.117 0.883 13 C -0.197 4.197 14 C 0.025 3.975 15 H 0.115 0.885 16 F -0.177 7.177 17 C -0.195 4.195 18 N -0.085 5.085 19 C -0.116 4.116 20 C -0.228 4.228 21 C -0.211 4.211 22 C -0.085 4.085 23 C -0.163 4.163 24 O -0.343 6.343 25 Si 0.607 3.393 26 H 0.092 0.908 27 H 0.065 0.935 28 H 0.073 0.927 29 H 0.083 0.917 30 H 0.089 0.911 31 H 0.104 0.896 32 H 0.097 0.903 33 H 0.082 0.918 34 H 0.077 0.923 35 H 0.156 0.844 36 H 0.235 0.765 37 H 0.089 0.911 38 H 0.087 0.913 39 H 0.093 0.907 40 H 0.092 0.908 41 H 0.118 0.882 42 H 0.101 0.899 43 H 0.100 0.900 44 H 0.118 0.882 45 H 0.183 0.817 46 H 0.155 0.845 47 H 0.160 0.840 48 H 0.089 0.911 49 H 0.227 0.773 50 H -0.188 1.188 51 H -0.176 1.176 Dipole moment (debyes) X Y Z Total from point charges -3.539 -0.747 -2.844 4.602 hybrid contribution -1.209 0.265 -1.071 1.637 sum -4.748 -0.482 -3.916 6.174 Atomic orbital electron populations 1.21921 0.95292 1.02662 1.01156 1.21500 0.96534 0.94375 1.02684 1.21455 0.97899 0.98068 0.93612 1.22413 0.94724 1.02660 1.02853 1.21552 0.98834 0.89000 0.89468 1.20807 0.82451 0.88393 0.79789 1.90792 1.28601 1.77260 1.42297 1.45950 1.41011 1.07802 1.43504 1.21396 1.00090 0.78766 1.00079 1.21767 0.99899 0.94460 0.99644 1.22534 0.96312 0.94163 0.99572 0.88288 1.23716 0.98617 0.96923 1.00492 1.22374 0.97997 0.83686 0.93432 0.88534 1.92831 1.95272 1.56108 1.73536 1.23609 0.96905 0.98201 1.00776 1.43363 1.05700 1.42602 1.16881 1.22058 0.83269 1.04984 1.01273 1.20811 0.98394 1.07215 0.96388 1.20501 0.91669 1.07456 1.01431 1.19570 0.92766 1.05390 0.90794 1.24448 0.88534 1.07832 0.95502 1.86650 1.23135 1.92804 1.31757 0.94271 0.82524 0.77946 0.84581 0.90784 0.93543 0.92738 0.91730 0.91088 0.89628 0.90268 0.91831 0.92299 0.84446 0.76512 0.91095 0.91312 0.90727 0.90785 0.88206 0.89945 0.89970 0.88179 0.81682 0.84476 0.84047 0.91134 0.77320 1.18839 1.17620 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.19 9.02 37.16 0.34 0.52 16 2 C -0.11 0.02 5.33 -26.73 -0.14 -0.12 16 3 C -0.09 0.08 2.15 -90.62 -0.19 -0.12 16 4 C -0.17 0.00 7.39 37.16 0.27 0.28 16 5 C 0.12 0.06 2.27 -69.08 -0.16 -0.10 16 6 C 0.50 0.89 6.00 -10.99 -0.07 0.82 16 7 O -0.52 -3.08 15.46 5.55 0.09 -2.99 16 8 N -0.73 0.99 5.48 -60.29 -0.33 0.66 16 9 C 0.12 -0.14 5.67 -4.04 -0.02 -0.17 16 10 C -0.12 0.42 5.17 -26.73 -0.14 0.28 16 11 C -0.11 0.25 3.64 -89.72 -0.33 -0.08 16 12 H 0.10 -0.12 8.13 -51.93 -0.42 -0.54 16 13 C -0.16 0.33 7.53 -25.83 -0.19 0.14 16 14 C 0.06 -0.07 5.69 -25.92 -0.15 -0.22 16 15 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 16 F -0.20 -0.48 17.38 2.25 0.04 -0.44 16 17 C -0.16 0.39 7.53 -25.92 -0.20 0.20 16 18 N -0.41 -1.06 1.82 -106.71 -0.19 -1.25 16 19 C 0.01 0.05 7.55 -16.75 -0.13 -0.08 16 20 C -0.20 -0.69 10.86 -39.78 -0.43 -1.13 16 21 C -0.19 -0.51 9.39 -39.78 -0.37 -0.88 16 22 C 0.03 0.06 6.26 -81.79 -0.51 -0.45 16 23 C -0.05 0.01 2.75 36.00 0.10 0.11 16 24 O -0.54 0.73 7.39 -35.23 -0.26 0.47 16 25 Si 0.71 -0.50 30.79 -169.99 -5.23 -5.73 16 26 H 0.07 -0.13 3.91 -51.93 -0.20 -0.33 16 27 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 28 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.06 -0.02 8.12 -51.93 -0.42 -0.44 16 30 H 0.07 0.16 7.59 -51.93 -0.39 -0.23 16 31 H 0.09 -0.22 7.71 -51.93 -0.40 -0.62 16 32 H 0.08 0.07 5.38 -51.93 -0.28 -0.21 16 33 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 34 H 0.06 0.07 6.53 -51.93 -0.34 -0.27 16 35 H 0.14 -0.06 4.37 -51.93 -0.23 -0.28 16 36 H 0.40 -1.62 8.13 -40.82 -0.33 -1.95 16 37 H 0.07 0.01 8.14 -51.92 -0.42 -0.41 16 38 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 39 H 0.07 -0.29 8.14 -51.93 -0.42 -0.72 16 40 H 0.07 -0.32 7.84 -51.93 -0.41 -0.73 16 41 H 0.10 -0.34 7.90 -51.93 -0.41 -0.75 16 42 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 43 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 44 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16 45 H 0.17 0.44 5.40 -52.49 -0.28 0.16 16 46 H 0.14 0.27 8.06 -52.49 -0.42 -0.16 16 47 H 0.14 0.06 6.48 -52.49 -0.34 -0.28 16 48 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 49 H 0.38 -1.85 8.74 45.56 0.40 -1.45 16 50 H -0.26 -0.23 7.11 56.52 0.40 0.18 16 51 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 LS Contribution 390.38 15.07 5.88 5.88 Total: 0.00 -8.01 390.38 -10.65 -18.66 By element: Atomic # 1 Polarization: -5.94 SS G_CDS: -8.32 Total: -14.26 kcal Atomic # 6 Polarization: 1.33 SS G_CDS: -2.32 Total: -0.99 kcal Atomic # 7 Polarization: -0.07 SS G_CDS: -0.52 Total: -0.60 kcal Atomic # 8 Polarization: -2.35 SS G_CDS: -0.17 Total: -2.53 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.04 Total: -0.44 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: -5.23 Total: -5.73 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -8.01 -10.65 -18.66 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12360566.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.714 kcal (2) G-P(sol) polarization free energy of solvation -8.008 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.722 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.650 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.658 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.373 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds