Wall clock time and date at job start Sun Mar 7 2021 02:32:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86305 * 109.46821 * 2 1 4 4 C 1.50700 * 109.47185 * 119.99995 * 2 1 3 5 5 C 1.38403 * 119.82534 * 65.00304 * 4 2 1 6 6 C 1.37893 * 120.16807 * 180.27866 * 5 4 2 7 7 C 1.39836 * 119.82402 * 359.46824 * 6 5 4 8 8 C 1.47206 * 120.16774 * 180.23013 * 7 6 5 9 9 C 1.34814 * 119.99785 * 0.32289 * 8 7 6 10 10 C 1.46436 * 119.99827 * 179.97438 * 9 8 7 11 11 O 1.21696 * 119.99873 * 0.02562 * 10 9 8 12 12 N 1.34770 * 119.99692 * 179.97438 * 10 9 8 13 13 C 1.46503 * 119.99826 * 180.02562 * 12 10 9 14 14 C 1.52994 * 109.47428 * 180.02562 * 13 12 10 15 15 C 1.53001 * 109.47738 * 179.97438 * 14 13 12 16 16 H 1.09010 * 112.84377 * 45.33118 * 15 14 13 17 17 C 1.53774 * 113.61891 * 176.52615 * 15 14 13 18 18 C 1.53780 * 87.07976 * 139.98318 * 17 15 14 19 19 H 1.09008 * 113.61704 * 220.01975 * 18 17 15 20 20 F 1.39902 * 113.61356 * 89.20140 * 18 17 15 21 21 C 1.53775 * 113.61510 * 274.14169 * 15 14 13 22 22 C 1.39830 * 119.66390 * 0.55003 * 7 6 5 23 23 C 1.37896 * 119.82728 * 359.70702 * 22 7 6 24 24 H 0.96703 * 114.00295 * 59.99826 * 1 2 3 25 25 H 1.08998 * 109.47323 * 240.00546 * 2 1 3 26 26 H 1.48495 * 110.00428 * 298.67870 * 3 2 1 27 27 H 1.48503 * 109.99819 * 60.00294 * 3 2 1 28 28 H 1.08002 * 119.91248 * 359.97438 * 5 4 2 29 29 H 1.08004 * 120.08196 * 179.70429 * 6 5 4 30 30 H 1.07996 * 120.00125 * 180.31365 * 8 7 6 31 31 H 1.07995 * 120.00095 * 359.97438 * 9 8 7 32 32 H 0.96995 * 120.00241 * 0.02562 * 12 10 9 33 33 H 1.09003 * 109.47104 * 300.00260 * 13 12 10 34 34 H 1.09000 * 109.46832 * 60.00201 * 13 12 10 35 35 H 1.09003 * 109.46910 * 300.00036 * 14 13 12 36 36 H 1.09000 * 109.47229 * 60.00102 * 14 13 12 37 37 H 1.09001 * 113.61590 * 254.53268 * 17 15 14 38 38 H 1.09002 * 113.61494 * 25.35430 * 17 15 14 39 39 H 1.08998 * 113.61730 * 334.56090 * 21 15 14 40 40 H 1.09003 * 113.61746 * 105.46557 * 21 15 14 41 41 H 1.08002 * 120.09119 * 179.68462 * 22 7 6 42 42 H 1.08001 * 119.91696 * 180.02562 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6825 -2.0619 1.3949 6 6 2.1339 -2.7177 2.5207 7 6 2.8544 -2.0161 3.4923 8 6 3.3442 -2.7098 4.6947 9 6 3.1041 -4.0263 4.8582 10 6 3.5918 -4.7165 6.0540 11 8 4.2135 -4.1017 6.9005 12 7 3.3514 -6.0325 6.2176 13 6 3.8388 -6.7229 7.4143 14 6 3.4349 -8.1973 7.3526 15 6 3.9445 -8.9186 8.6020 16 1 3.7557 -8.3607 9.5193 17 6 3.5171 -10.3937 8.6792 18 6 4.9283 -10.6929 9.2121 19 1 5.3595 -11.6118 8.8146 20 9 5.0325 -10.6019 10.6043 21 6 5.3914 -9.4233 8.4748 22 6 3.1014 -0.6507 3.3192 23 6 2.6388 -0.0078 2.1904 24 1 -0.3934 0.4417 -0.7650 25 1 1.7924 -0.5137 -0.8900 26 1 1.5879 2.4587 -1.2242 27 1 1.5614 2.4679 1.2086 28 1 1.1290 -2.6031 0.6417 29 1 1.9347 -3.7714 2.6499 30 1 3.8960 -2.1642 5.4458 31 1 2.5521 -4.5719 4.1072 32 1 2.8556 -6.5225 5.5432 33 1 4.9251 -6.6459 7.4611 34 1 3.4034 -6.2633 8.3016 35 1 2.3486 -8.2747 7.3057 36 1 3.8706 -8.6566 6.4654 37 1 2.7269 -10.5820 9.4059 38 1 3.3126 -10.8405 7.7062 39 1 5.7018 -9.6047 7.4458 40 1 6.1122 -8.8293 9.0368 41 1 3.6527 -0.1010 4.0677 42 1 2.8291 1.0467 2.0550 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_12360594.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:57 Heat of formation + Delta-G solvation = -56.008388 kcal Electronic energy + Delta-G solvation = -22991.679996 eV Core-core repulsion = 19239.378743 eV Total energy + Delta-G solvation = -3752.301253 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.142 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -48.60236 -40.86211 -40.40617 -39.44808 -37.90653 -36.09258 -35.13644 -32.26164 -32.07655 -31.17086 -27.46073 -26.97326 -25.92276 -24.07998 -23.70548 -22.83123 -21.88825 -20.66134 -20.33925 -18.66369 -18.47978 -17.62371 -17.35602 -16.99893 -16.75608 -16.56909 -16.43119 -16.22888 -15.87279 -15.42612 -15.29488 -15.18735 -14.70334 -14.52854 -14.39079 -14.08720 -13.88270 -13.79435 -13.63451 -13.41442 -13.18972 -13.15988 -12.62250 -12.24388 -12.12863 -12.08446 -11.91463 -11.74083 -11.32016 -11.29752 -11.20861 -10.83936 -10.55975 -10.08278 -10.01345 -9.25496 -5.02283 -0.54531 0.36285 0.91584 1.21111 1.53702 1.89539 2.19317 2.31784 2.75399 3.15729 3.20769 3.26962 3.47241 3.52478 3.60529 3.68169 3.74760 3.78475 3.89083 3.97852 4.09468 4.13781 4.19324 4.26205 4.31908 4.35480 4.46422 4.47026 4.51847 4.65901 4.69562 4.80585 4.83683 4.90334 4.90629 4.99164 5.02912 5.06720 5.12731 5.35220 5.36335 5.44233 5.44622 5.59469 5.84847 6.35253 6.51377 7.27367 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.079 4.079 3 Si 0.684 3.316 4 C -0.061 4.061 5 C -0.094 4.094 6 C -0.100 4.100 7 C -0.074 4.074 8 C -0.014 4.014 9 C -0.216 4.216 10 C 0.547 3.453 11 O -0.543 6.543 12 N -0.728 5.728 13 C 0.119 3.881 14 C -0.121 4.121 15 C -0.107 4.107 16 H 0.099 0.901 17 C -0.157 4.157 18 C 0.061 3.939 19 H 0.097 0.903 20 F -0.197 7.197 21 C -0.160 4.160 22 C -0.087 4.087 23 C -0.117 4.117 24 H 0.381 0.619 25 H 0.078 0.922 26 H -0.260 1.260 27 H -0.254 1.254 28 H 0.128 0.872 29 H 0.130 0.870 30 H 0.138 0.862 31 H 0.130 0.870 32 H 0.402 0.598 33 H 0.070 0.930 34 H 0.069 0.931 35 H 0.074 0.926 36 H 0.073 0.927 37 H 0.081 0.919 38 H 0.100 0.900 39 H 0.100 0.900 40 H 0.082 0.918 41 H 0.135 0.865 42 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.179 -2.260 -5.770 6.200 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.188 4.188 3 Si 0.585 3.415 4 C -0.061 4.061 5 C -0.112 4.112 6 C -0.118 4.118 7 C -0.074 4.074 8 C -0.034 4.034 9 C -0.236 4.236 10 C 0.336 3.664 11 O -0.422 6.422 12 N -0.380 5.380 13 C -0.005 4.005 14 C -0.158 4.158 15 C -0.126 4.126 16 H 0.117 0.883 17 C -0.195 4.195 18 C 0.025 3.975 19 H 0.114 0.886 20 F -0.178 7.178 21 C -0.198 4.198 22 C -0.105 4.105 23 C -0.135 4.135 24 H 0.229 0.771 25 H 0.096 0.904 26 H -0.186 1.186 27 H -0.179 1.179 28 H 0.146 0.854 29 H 0.148 0.852 30 H 0.156 0.844 31 H 0.148 0.852 32 H 0.236 0.764 33 H 0.088 0.912 34 H 0.087 0.913 35 H 0.093 0.907 36 H 0.092 0.908 37 H 0.100 0.900 38 H 0.118 0.882 39 H 0.118 0.882 40 H 0.101 0.899 41 H 0.153 0.847 42 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 0.513 -1.311 -4.551 4.764 hybrid contribution -1.441 -0.478 -0.816 1.724 sum -0.928 -1.789 -5.367 5.733 Atomic orbital electron populations 1.86591 1.17666 1.80197 1.49850 1.24841 0.84591 1.11125 0.98292 0.94997 0.91657 0.74551 0.80323 1.19421 0.97654 0.94101 0.94911 1.20946 0.98687 0.93824 0.97759 1.21441 0.96884 1.00059 0.93371 1.19059 0.99733 0.93875 0.94712 1.22412 0.92749 0.94027 0.94202 1.22889 1.05862 0.96156 0.98726 1.18342 0.79604 0.81815 0.86663 1.90841 1.40818 1.66115 1.44449 1.45884 1.58282 1.09642 1.24167 1.21372 0.99963 0.91438 0.87717 1.21769 1.01869 0.93997 0.98195 1.22511 0.95768 0.95419 0.98916 0.88288 1.23609 0.96796 0.96295 1.02820 1.22419 0.98718 1.00059 0.76325 0.88560 1.92830 1.96899 1.97521 1.30525 1.23714 0.97552 0.96600 1.01885 1.21332 0.98533 0.93365 0.97279 1.20961 0.98960 0.99695 0.93865 0.77126 0.90403 1.18571 1.17912 0.85397 0.85222 0.84401 0.85233 0.76430 0.91197 0.91274 0.90741 0.90830 0.89987 0.88170 0.88175 0.89938 0.84744 0.85148 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.42 12.81 -35.23 -0.45 -0.87 16 2 C -0.08 0.04 2.79 36.01 0.10 0.14 16 3 Si 0.68 -0.84 29.84 -169.99 -5.07 -5.91 16 4 C -0.06 -0.04 5.39 -104.50 -0.56 -0.61 16 5 C -0.09 -0.04 9.66 -39.65 -0.38 -0.43 16 6 C -0.10 0.01 9.41 -39.11 -0.37 -0.36 16 7 C -0.07 -0.04 5.87 -105.06 -0.62 -0.65 16 8 C -0.01 -0.01 9.46 -37.15 -0.35 -0.36 16 9 C -0.22 -0.02 9.41 -37.50 -0.35 -0.37 16 10 C 0.55 1.26 7.74 -12.96 -0.10 1.16 16 11 O -0.54 -3.54 16.23 5.19 0.08 -3.45 16 12 N -0.73 0.44 5.55 -61.70 -0.34 0.10 16 13 C 0.12 -0.06 5.67 -4.04 -0.02 -0.08 16 14 C -0.12 0.35 5.15 -26.73 -0.14 0.21 16 15 C -0.11 0.20 3.62 -89.81 -0.32 -0.13 16 16 H 0.10 -0.08 8.14 -51.92 -0.42 -0.50 16 17 C -0.16 0.33 7.54 -25.92 -0.20 0.13 16 18 C 0.06 -0.05 5.69 -25.83 -0.15 -0.19 16 19 H 0.10 -0.22 8.14 -51.92 -0.42 -0.64 16 20 F -0.20 -0.53 17.38 2.25 0.04 -0.49 16 21 C -0.16 0.28 7.54 -25.83 -0.19 0.08 16 22 C -0.09 -0.01 9.80 -39.11 -0.38 -0.39 16 23 C -0.12 -0.02 8.65 -39.65 -0.34 -0.37 16 24 H 0.38 -1.20 8.74 45.56 0.40 -0.80 16 25 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 26 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 27 H -0.25 -0.49 7.04 56.52 0.40 -0.09 16 28 H 0.13 -0.08 8.06 -52.49 -0.42 -0.50 16 29 H 0.13 -0.29 6.17 -52.48 -0.32 -0.62 16 30 H 0.14 0.16 7.52 -52.49 -0.39 -0.23 16 31 H 0.13 -0.34 6.07 -52.49 -0.32 -0.66 16 32 H 0.40 -1.43 8.45 -40.82 -0.35 -1.78 16 33 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 34 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 35 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 36 H 0.07 -0.28 7.87 -51.93 -0.41 -0.68 16 37 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 38 H 0.10 -0.36 8.10 -51.93 -0.42 -0.78 16 39 H 0.10 -0.31 7.92 -51.93 -0.41 -0.72 16 40 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 41 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16 42 H 0.13 -0.18 4.84 -52.49 -0.25 -0.44 16 LS Contribution 356.10 15.07 5.37 5.37 Total: 0.00 -8.78 356.10 -10.66 -19.43 By element: Atomic # 1 Polarization: -6.06 SS G_CDS: -5.90 Total: -11.96 kcal Atomic # 6 Polarization: 2.17 SS G_CDS: -4.38 Total: -2.21 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.34 Total: 0.10 kcal Atomic # 8 Polarization: -3.96 SS G_CDS: -0.37 Total: -4.33 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.04 Total: -0.49 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.07 Total: -5.91 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -8.78 -10.66 -19.43 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12360594.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.574 kcal (2) G-P(sol) polarization free energy of solvation -8.777 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.351 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.657 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.435 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.008 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds