Wall clock time and date at job start Sun Mar 7 2021 02:33:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.47091 * 2 1 4 4 C 1.50707 * 109.47183 * 119.99720 * 2 1 3 5 5 C 1.38605 * 119.84092 * 74.99640 * 4 2 1 6 6 F 1.35104 * 119.91956 * 0.02562 * 5 4 2 7 7 C 1.38112 * 120.16335 * 180.27449 * 5 4 2 8 8 C 1.39616 * 119.85117 * 359.50037 * 7 5 4 9 9 C 1.47698 * 120.15236 * 180.23320 * 8 7 5 10 10 O 1.21577 * 119.99656 * 180.27549 * 9 8 7 11 11 N 1.34771 * 120.00307 * 0.26905 * 9 8 7 12 12 C 1.46507 * 120.00070 * 180.02562 * 11 9 8 13 13 C 1.53000 * 109.46830 * 179.97438 * 12 11 9 14 14 C 1.53001 * 109.46472 * 179.97438 * 13 12 11 15 15 H 1.08999 * 112.85420 * 43.81070 * 14 13 12 16 16 C 1.53791 * 113.61103 * 175.00118 * 14 13 12 17 17 C 1.53776 * 87.08056 * 139.98028 * 16 14 13 18 18 H 1.09002 * 113.61716 * 220.01765 * 17 16 14 19 19 F 1.39901 * 113.61538 * 89.19716 * 17 16 14 20 20 C 1.53781 * 87.08446 * 334.56612 * 17 16 14 21 21 C 1.39842 * 119.68795 * 0.50042 * 8 7 5 22 22 F 1.35104 * 120.08199 * 179.77015 * 21 8 7 23 23 C 1.38225 * 119.84041 * 255.02417 * 4 2 1 24 24 H 0.96706 * 113.99914 * 300.00050 * 1 2 3 25 25 H 1.08997 * 109.46870 * 239.99378 * 2 1 3 26 26 H 1.48494 * 110.00055 * 178.68181 * 3 2 1 27 27 H 1.48502 * 109.99837 * 299.99880 * 3 2 1 28 28 H 1.08000 * 120.07343 * 179.74644 * 7 5 4 29 29 H 0.96996 * 120.00117 * 0.02562 * 11 9 8 30 30 H 1.08999 * 109.46672 * 299.99896 * 12 11 9 31 31 H 1.09003 * 109.47226 * 59.99905 * 12 11 9 32 32 H 1.08999 * 109.47465 * 299.99480 * 13 12 11 33 33 H 1.08997 * 109.46977 * 60.00344 * 13 12 11 34 34 H 1.09001 * 113.61233 * 254.52877 * 16 14 13 35 35 H 1.08999 * 113.61397 * 25.34655 * 16 14 13 36 36 H 1.09000 * 113.61596 * 270.88634 * 20 17 16 37 37 H 1.09006 * 113.61395 * 139.97495 * 20 17 16 38 38 H 1.07998 * 119.93429 * 359.95317 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.8678 -2.0931 1.3029 6 9 1.3566 -2.7991 0.2707 7 6 2.3211 -2.7506 2.4298 8 6 2.8540 -2.0199 3.4935 9 6 3.3454 -2.7166 4.6996 10 8 3.8042 -2.0772 5.6263 11 7 3.2850 -4.0609 4.7730 12 6 3.7720 -4.7519 5.9696 13 6 3.5894 -6.2611 5.7968 14 6 4.0986 -6.9826 7.0462 15 1 3.7830 -6.5006 7.9715 16 6 3.8490 -8.5000 7.0259 17 6 5.2474 -8.6589 7.6456 18 1 5.8122 -9.4981 7.2394 19 9 5.2471 -8.6304 9.0443 20 6 5.6008 -7.3086 7.0002 21 6 2.9151 -0.6251 3.4139 22 9 3.4249 0.0901 4.4405 23 6 2.4528 0.0202 2.2818 24 1 -0.3933 0.4417 0.7651 25 1 1.7923 -0.5139 -0.8899 26 1 3.5345 1.7703 0.0321 27 1 1.5615 2.4678 -1.2085 28 1 2.2671 -3.8277 2.4863 29 1 2.9192 -4.5710 4.0335 30 1 4.8288 -4.5274 6.1139 31 1 3.2070 -4.4151 6.8388 32 1 2.5325 -6.4851 5.6527 33 1 4.1541 -6.5981 4.9275 34 1 3.0408 -8.8184 7.6845 35 1 3.7651 -8.9153 6.0217 36 1 5.9973 -7.3984 5.9889 37 1 6.2068 -6.6651 7.6381 38 1 2.4996 1.0973 2.2186 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_12360598.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:00 Heat of formation + Delta-G solvation = -154.053644 kcal Electronic energy + Delta-G solvation = -25652.854371 eV Core-core repulsion = 21241.157365 eV Total energy + Delta-G solvation = -4411.697006 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.107 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -50.13329 -50.01415 -48.63580 -41.34367 -40.05621 -39.45409 -37.73912 -36.24500 -33.70166 -31.74341 -31.44440 -28.06851 -27.03175 -26.02913 -24.49854 -23.75915 -22.95190 -21.89170 -20.61398 -19.74546 -18.86998 -18.65032 -17.96222 -17.45950 -17.35785 -17.02483 -16.93330 -16.72175 -16.54228 -16.40962 -16.14364 -15.97231 -15.88835 -15.57226 -15.44354 -15.20935 -14.74343 -14.53626 -14.23324 -13.88237 -13.79974 -13.69459 -13.29371 -13.23903 -13.02215 -12.71260 -12.42150 -12.19565 -12.17231 -11.97080 -11.37035 -11.31016 -11.03385 -10.72435 -10.67320 -10.26436 -9.85944 -5.21460 -0.86850 -0.39869 1.01725 1.38135 1.49269 1.81084 1.81937 2.23125 2.72144 2.76940 3.00723 3.11045 3.13122 3.15982 3.36211 3.42041 3.42146 3.53178 3.65887 3.68631 3.91290 4.00342 4.08373 4.21229 4.24304 4.25135 4.39691 4.43899 4.47626 4.57235 4.60136 4.63909 4.65057 4.74989 4.85457 4.91409 4.96409 5.18968 5.31003 5.31537 6.21396 6.33270 6.97264 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.072 4.072 3 Si 0.689 3.311 4 C -0.101 4.101 5 C 0.110 3.890 6 F -0.121 7.121 7 C -0.094 4.094 8 C -0.141 4.141 9 C 0.558 3.442 10 O -0.512 6.512 11 N -0.724 5.724 12 C 0.119 3.881 13 C -0.122 4.122 14 C -0.107 4.107 15 H 0.100 0.900 16 C -0.157 4.157 17 C 0.061 3.939 18 H 0.097 0.903 19 F -0.197 7.197 20 C -0.160 4.160 21 C 0.160 3.840 22 F -0.103 7.103 23 C -0.130 4.130 24 H 0.381 0.619 25 H 0.122 0.878 26 H -0.250 1.250 27 H -0.246 1.246 28 H 0.151 0.849 29 H 0.400 0.600 30 H 0.073 0.927 31 H 0.073 0.927 32 H 0.075 0.925 33 H 0.074 0.926 34 H 0.082 0.918 35 H 0.100 0.900 36 H 0.100 0.900 37 H 0.082 0.918 38 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.459 -1.656 -2.124 3.063 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.182 4.182 3 Si 0.589 3.411 4 C -0.102 4.102 5 C 0.090 3.910 6 F -0.099 7.099 7 C -0.113 4.113 8 C -0.145 4.145 9 C 0.344 3.656 10 O -0.388 6.388 11 N -0.377 5.377 12 C -0.004 4.004 13 C -0.159 4.159 14 C -0.126 4.126 15 H 0.118 0.882 16 C -0.195 4.195 17 C 0.025 3.975 18 H 0.114 0.886 19 F -0.177 7.177 20 C -0.198 4.198 21 C 0.139 3.861 22 F -0.081 7.081 23 C -0.149 4.149 24 H 0.229 0.771 25 H 0.140 0.860 26 H -0.175 1.175 27 H -0.170 1.170 28 H 0.169 0.831 29 H 0.236 0.764 30 H 0.092 0.908 31 H 0.092 0.908 32 H 0.094 0.906 33 H 0.093 0.907 34 H 0.101 0.899 35 H 0.118 0.882 36 H 0.118 0.882 37 H 0.101 0.899 38 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -0.539 -0.922 -2.370 2.599 hybrid contribution -0.107 -1.014 -0.460 1.118 sum -0.647 -1.935 -2.830 3.489 Atomic orbital electron populations 1.86595 1.16073 1.81624 1.49192 1.25151 0.85987 1.10768 0.96336 0.94816 0.81538 0.76698 0.88039 1.20516 0.99414 0.92706 0.97612 1.17222 0.98973 0.88881 0.85882 1.91586 1.84250 1.78021 1.56063 1.21181 0.97737 1.01099 0.91327 1.19886 1.05530 0.92585 0.96517 1.17818 0.79201 0.82364 0.86213 1.90905 1.44167 1.65758 1.37975 1.45879 1.64645 1.06227 1.20989 1.21457 1.00511 0.91235 0.87209 1.21787 1.02454 0.93370 0.98327 1.22513 0.95857 0.95314 0.98898 0.88183 1.23616 0.97125 0.96252 1.02521 1.22371 0.99133 0.99838 0.76163 0.88560 1.92832 1.97381 1.97658 1.29868 1.23695 0.97120 0.96543 1.02420 1.17493 0.95191 0.87978 0.85433 1.91663 1.83336 1.77059 1.56066 1.20869 1.01086 1.00993 0.91912 0.77097 0.86049 1.17469 1.17008 0.83114 0.76429 0.90821 0.90843 0.90605 0.90744 0.89944 0.88160 0.88163 0.89915 0.82400 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.50 12.88 -35.23 -0.45 0.05 16 2 C -0.07 0.11 2.44 36.01 0.09 0.20 16 3 Si 0.69 -1.69 29.90 -169.99 -5.08 -6.77 16 4 C -0.10 0.13 5.27 -104.49 -0.55 -0.42 16 5 C 0.11 -0.07 7.23 -39.49 -0.29 -0.36 16 6 F -0.12 -0.10 16.73 2.25 0.04 -0.07 16 7 C -0.09 0.18 9.52 -39.11 -0.37 -0.20 16 8 C -0.14 -0.02 5.88 -104.92 -0.62 -0.63 16 9 C 0.56 0.94 7.77 -12.40 -0.10 0.85 16 10 O -0.51 -2.99 15.34 5.30 0.08 -2.91 16 11 N -0.72 1.13 5.51 -61.29 -0.34 0.79 16 12 C 0.12 -0.19 5.66 -4.04 -0.02 -0.21 16 13 C -0.12 0.46 5.17 -26.73 -0.14 0.32 16 14 C -0.11 0.27 3.63 -89.80 -0.33 -0.05 16 15 H 0.10 -0.16 8.13 -51.93 -0.42 -0.58 16 16 C -0.16 0.41 7.54 -25.92 -0.20 0.22 16 17 C 0.06 -0.08 5.69 -25.92 -0.15 -0.22 16 18 H 0.10 -0.25 8.14 -51.93 -0.42 -0.68 16 19 F -0.20 -0.45 17.39 2.25 0.04 -0.41 16 20 C -0.16 0.37 7.53 -25.92 -0.20 0.17 16 21 C 0.16 0.10 7.28 -38.97 -0.28 -0.18 16 22 F -0.10 -0.32 15.55 2.25 0.04 -0.28 16 23 C -0.13 0.22 8.62 -39.57 -0.34 -0.12 16 24 H 0.38 -1.97 8.70 45.56 0.40 -1.58 16 25 H 0.12 -0.10 7.89 -51.93 -0.41 -0.51 16 26 H -0.25 0.01 7.11 56.52 0.40 0.41 16 27 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 28 H 0.15 -0.71 6.40 -52.49 -0.34 -1.05 16 29 H 0.40 -1.78 6.50 -40.82 -0.27 -2.05 16 30 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 32 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 33 H 0.07 -0.34 7.84 -51.93 -0.41 -0.75 16 34 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.10 -0.41 8.10 -51.93 -0.42 -0.83 16 36 H 0.10 -0.37 7.89 -51.93 -0.41 -0.78 16 37 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 38 H 0.16 -0.66 5.10 -52.49 -0.27 -0.93 16 LS Contribution 332.14 15.07 5.01 5.01 Total: 0.00 -8.71 332.14 -8.44 -17.14 By element: Atomic # 1 Polarization: -7.62 SS G_CDS: -4.28 Total: -11.90 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: -3.48 Total: -0.64 kcal Atomic # 7 Polarization: 1.13 SS G_CDS: -0.34 Total: 0.79 kcal Atomic # 8 Polarization: -2.49 SS G_CDS: -0.37 Total: -2.87 kcal Atomic # 9 Polarization: -0.87 SS G_CDS: 0.11 Total: -0.76 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.08 Total: -6.77 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -8.71 -8.44 -17.14 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12360598.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.913 kcal (2) G-P(sol) polarization free energy of solvation -8.706 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.618 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.435 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.141 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.054 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds