Wall clock time and date at job start Sun Mar 7 2021 02:33:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35657 * 116.99877 * 2 1 4 4 C 1.40133 * 120.15338 * 180.29821 * 3 2 1 5 5 C 1.47543 * 120.18907 * 359.97438 * 4 3 2 6 6 O 1.21585 * 119.99977 * 0.30211 * 5 4 3 7 7 N 1.34774 * 119.99906 * 180.29141 * 5 4 3 8 8 C 1.46500 * 120.00193 * 180.02562 * 7 5 4 9 9 C 1.52998 * 109.47542 * 180.02562 * 8 7 5 10 10 C 1.52998 * 109.47243 * 179.97438 * 9 8 7 11 11 H 1.08994 * 112.84816 * 43.80579 * 10 9 8 12 12 C 1.53783 * 113.61175 * 174.99632 * 10 9 8 13 13 C 1.53782 * 87.08051 * 139.97974 * 12 10 9 14 14 H 1.08998 * 113.62124 * 220.01810 * 13 12 10 15 15 F 1.39902 * 113.60933 * 89.11406 * 13 12 10 16 16 C 1.53779 * 113.61559 * 272.49473 * 10 9 8 17 17 C 1.39702 * 119.62092 * 180.29666 * 4 3 2 18 18 C 1.37790 * 119.90785 * 359.70040 * 17 4 3 19 19 C 1.50695 * 119.85051 * 180.02562 * 18 17 4 20 20 O 1.42898 * 109.47413 * 299.97676 * 19 18 17 21 21 Si 1.86307 * 109.46839 * 179.97438 * 19 18 17 22 22 C 1.38554 * 120.29622 * 359.97438 * 18 17 4 23 23 C 1.38056 * 120.39136 * 0.03707 * 22 18 17 24 24 H 1.09002 * 109.47017 * 180.02562 * 1 2 3 25 25 H 1.08997 * 109.47232 * 299.99299 * 1 2 3 26 26 H 1.08995 * 109.47465 * 60.00100 * 1 2 3 27 27 H 0.97002 * 120.00411 * 0.02562 * 7 5 4 28 28 H 1.09001 * 109.47030 * 300.00214 * 8 7 5 29 29 H 1.08996 * 109.47331 * 59.99964 * 8 7 5 30 30 H 1.09001 * 109.46847 * 299.99976 * 9 8 7 31 31 H 1.08996 * 109.47123 * 59.99486 * 9 8 7 32 32 H 1.08993 * 113.61661 * 254.52933 * 12 10 9 33 33 H 1.09000 * 113.61576 * 25.35039 * 12 10 9 34 34 H 1.08998 * 113.61187 * 334.56911 * 16 10 9 35 35 H 1.08995 * 113.61556 * 105.46701 * 16 10 9 36 36 H 1.08001 * 120.04898 * 179.68667 * 17 4 3 37 37 H 1.09001 * 109.47024 * 59.98670 * 19 18 17 38 38 H 0.96694 * 113.99987 * 300.00582 * 20 19 18 39 39 H 1.48499 * 109.99998 * 58.68510 * 21 19 18 40 40 H 1.48503 * 109.99717 * 180.02562 * 21 19 18 41 41 H 1.07999 * 119.80316 * 180.02562 * 22 18 17 42 42 H 1.08002 * 119.95450 * 179.97438 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4440 1.2859 -0.0063 5 6 4.2550 0.0533 -0.0124 6 8 3.7095 -1.0333 -0.0175 7 7 5.6004 0.1319 -0.0125 8 6 6.4057 -1.0919 -0.0192 9 6 7.8911 -0.7251 -0.0172 10 6 8.7320 -2.0032 -0.0235 11 1 8.3591 -2.7517 -0.7225 12 6 10.2433 -1.7456 -0.1450 13 6 10.4385 -2.8747 0.8807 14 1 11.2169 -2.6679 1.6151 15 9 10.5589 -4.1427 0.3019 16 6 9.0193 -2.5586 1.3815 17 6 4.0666 2.5364 0.0000 18 6 3.3036 3.6838 0.0062 19 6 3.9766 5.0321 0.0125 20 8 4.7924 5.1519 1.1796 21 14 2.6823 6.3721 0.0191 22 6 1.9204 3.6033 0.0056 23 6 1.2923 2.3740 -0.0004 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5137 0.8900 26 1 -0.3634 0.5138 -0.8899 27 1 6.0357 0.9988 -0.0082 28 1 6.1765 -1.6824 0.8679 29 1 6.1759 -1.6732 -0.9120 30 1 8.1206 -0.1343 -0.9040 31 1 8.1206 -0.1439 0.8759 32 1 10.6477 -1.9762 -1.1305 33 1 10.5498 -0.7652 0.2195 34 1 8.9913 -1.8009 2.1645 35 1 8.4355 -3.4453 1.6282 36 1 5.1445 2.6039 0.0004 37 1 4.5983 5.1320 -0.8773 38 1 4.3042 5.0728 2.0105 39 1 1.8080 6.2279 1.2108 40 1 3.3332 7.7069 0.0247 41 1 1.3301 4.5077 0.0100 42 1 0.2137 2.3195 -0.0005 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_12496546.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:04 Heat of formation + Delta-G solvation = -101.913441 kcal Electronic energy + Delta-G solvation = -25278.194102 eV Core-core repulsion = 21333.446206 eV Total energy + Delta-G solvation = -3944.747897 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -48.58227 -41.72840 -40.12905 -39.32889 -39.24784 -37.28186 -35.93777 -33.11064 -31.94891 -31.33111 -28.62248 -26.98872 -26.36835 -26.24695 -24.69983 -23.08949 -22.38997 -21.38538 -20.49790 -19.55026 -18.48378 -18.12778 -17.31492 -17.26817 -16.94260 -16.81099 -16.54007 -16.30259 -16.23976 -16.01651 -15.87950 -15.76847 -15.29808 -14.77210 -14.60117 -14.56555 -14.34342 -13.77710 -13.66947 -13.56658 -13.45815 -13.24376 -13.05953 -12.56894 -12.45184 -12.28562 -12.11641 -12.08227 -11.87429 -11.74601 -11.28586 -11.17293 -10.87739 -10.54449 -10.24653 -9.97057 -9.29700 -5.04930 -0.26053 0.17247 1.19238 1.50601 1.87559 1.89077 2.16847 2.21526 2.72917 3.18848 3.23415 3.25773 3.47793 3.50356 3.55755 3.62337 3.62977 3.77763 3.92740 4.01106 4.08705 4.18229 4.19236 4.21887 4.32582 4.36488 4.48677 4.50499 4.54858 4.56266 4.62893 4.69350 4.73840 4.83365 4.87652 4.93626 5.01877 5.05149 5.10048 5.21097 5.39118 5.46178 5.49990 6.27590 6.30512 6.56526 7.36056 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.174 4.174 5 C 0.560 3.440 6 O -0.516 6.516 7 N -0.732 5.732 8 C 0.121 3.879 9 C -0.121 4.121 10 C -0.107 4.107 11 H 0.099 0.901 12 C -0.157 4.157 13 C 0.061 3.939 14 H 0.096 0.904 15 F -0.197 7.197 16 C -0.160 4.160 17 C -0.020 4.020 18 C -0.167 4.167 19 C -0.068 4.068 20 O -0.530 6.530 21 Si 0.681 3.319 22 C -0.047 4.047 23 C -0.214 4.214 24 H 0.105 0.895 25 H 0.058 0.942 26 H 0.059 0.941 27 H 0.398 0.602 28 H 0.069 0.931 29 H 0.069 0.931 30 H 0.074 0.926 31 H 0.073 0.927 32 H 0.081 0.919 33 H 0.100 0.900 34 H 0.100 0.900 35 H 0.082 0.918 36 H 0.135 0.865 37 H 0.120 0.880 38 H 0.377 0.623 39 H -0.259 1.259 40 H -0.256 1.256 41 H 0.134 0.866 42 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.400 4.706 -0.573 4.943 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.178 4.178 5 C 0.347 3.653 6 O -0.391 6.391 7 N -0.386 5.386 8 C -0.002 4.002 9 C -0.159 4.159 10 C -0.125 4.125 11 H 0.117 0.883 12 C -0.195 4.195 13 C 0.025 3.975 14 H 0.114 0.886 15 F -0.178 7.178 16 C -0.198 4.198 17 C -0.039 4.039 18 C -0.168 4.168 19 C -0.178 4.178 20 O -0.337 6.337 21 Si 0.582 3.418 22 C -0.065 4.065 23 C -0.232 4.232 24 H 0.123 0.877 25 H 0.076 0.924 26 H 0.078 0.922 27 H 0.233 0.767 28 H 0.088 0.912 29 H 0.088 0.912 30 H 0.093 0.907 31 H 0.092 0.908 32 H 0.100 0.900 33 H 0.118 0.882 34 H 0.118 0.882 35 H 0.100 0.900 36 H 0.153 0.847 37 H 0.137 0.863 38 H 0.224 0.776 39 H -0.184 1.184 40 H -0.181 1.181 41 H 0.152 0.848 42 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.585 4.402 -0.610 4.719 hybrid contribution 0.299 0.144 1.053 1.104 sum -1.287 4.546 0.444 4.746 Atomic orbital electron populations 1.23238 0.78171 1.04783 1.01454 1.86387 1.21216 1.25190 1.86150 1.19103 0.90958 0.85075 0.90479 1.19347 0.90915 0.93914 1.13646 1.17947 0.81851 0.88670 0.76834 1.90851 1.71529 1.28618 1.48131 1.45909 1.06002 1.09953 1.76715 1.21355 0.89383 0.86680 1.02789 1.21776 0.93299 0.97690 1.03108 1.22506 0.94709 0.97533 0.97791 0.88260 1.23613 0.96301 0.99072 1.00521 1.22379 0.99296 0.79594 0.96250 0.88586 1.92829 1.97093 1.41780 1.86082 1.23688 0.95799 1.02648 0.97620 1.20962 0.99880 0.89833 0.93208 1.20068 0.93560 0.95906 1.07273 1.24934 1.02529 0.99191 0.91183 1.86591 1.36866 1.94470 1.15763 0.95065 0.79623 0.77580 0.89490 1.20991 0.93733 0.97342 0.94419 1.21235 1.00758 0.91539 1.09716 0.87654 0.92364 0.92209 0.76663 0.91236 0.91242 0.90722 0.90844 0.89995 0.88173 0.88187 0.89966 0.84698 0.86257 0.77560 1.18433 1.18064 0.84843 0.84117 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.98 16 2 O -0.28 -1.01 8.57 -40.55 -0.35 -1.36 16 3 C 0.19 0.45 6.70 -38.70 -0.26 0.19 16 4 C -0.17 -0.38 5.89 -104.85 -0.62 -1.00 16 5 C 0.56 2.15 7.76 -12.47 -0.10 2.05 16 6 O -0.52 -4.05 15.16 -16.59 -0.25 -4.30 16 7 N -0.73 -0.35 5.51 -61.35 -0.34 -0.69 16 8 C 0.12 0.02 5.66 -4.04 -0.02 -0.01 16 9 C -0.12 0.28 5.17 -26.73 -0.14 0.15 16 10 C -0.11 0.16 3.63 -89.81 -0.33 -0.17 16 11 H 0.10 -0.05 8.13 -51.93 -0.42 -0.47 16 12 C -0.16 0.28 7.54 -25.92 -0.20 0.08 16 13 C 0.06 -0.03 5.69 -25.92 -0.15 -0.18 16 14 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 15 F -0.20 -0.58 17.38 2.25 0.04 -0.54 16 16 C -0.16 0.22 7.53 -25.92 -0.20 0.02 16 17 C -0.02 0.01 9.09 -39.20 -0.36 -0.35 16 18 C -0.17 0.18 5.39 -104.67 -0.56 -0.39 16 19 C -0.07 0.12 2.81 36.00 0.10 0.22 16 20 O -0.53 0.22 12.76 -35.23 -0.45 -0.23 16 21 Si 0.68 -1.45 29.77 -169.99 -5.06 -6.51 16 22 C -0.05 0.07 8.66 -39.53 -0.34 -0.28 16 23 C -0.21 0.09 9.03 -39.47 -0.36 -0.27 16 24 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 25 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 26 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 27 H 0.40 -0.86 6.50 -40.82 -0.27 -1.12 16 28 H 0.07 0.09 8.14 -51.93 -0.42 -0.34 16 29 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 30 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 31 H 0.07 -0.23 7.84 -51.93 -0.41 -0.63 16 32 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 33 H 0.10 -0.32 8.10 -51.93 -0.42 -0.74 16 34 H 0.10 -0.27 7.89 -51.93 -0.41 -0.68 16 35 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 36 H 0.14 -0.30 6.40 -52.49 -0.34 -0.63 16 37 H 0.12 -0.31 7.96 -51.93 -0.41 -0.72 16 38 H 0.38 -1.10 8.70 45.56 0.40 -0.71 16 39 H -0.26 0.05 7.11 56.52 0.40 0.45 16 40 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 41 H 0.13 -0.47 4.85 -52.49 -0.25 -0.72 16 42 H 0.14 -0.37 6.30 -52.49 -0.33 -0.70 16 LS Contribution 348.70 15.07 5.25 5.25 Total: 0.00 -9.04 348.70 -9.49 -18.53 By element: Atomic # 1 Polarization: -5.39 SS G_CDS: -5.82 Total: -11.21 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: -2.52 Total: 1.05 kcal Atomic # 7 Polarization: -0.35 SS G_CDS: -0.34 Total: -0.69 kcal Atomic # 8 Polarization: -4.83 SS G_CDS: -1.05 Total: -5.88 kcal Atomic # 9 Polarization: -0.58 SS G_CDS: 0.04 Total: -0.54 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.06 Total: -6.51 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -9.04 -9.49 -18.53 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12496546.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.385 kcal (2) G-P(sol) polarization free energy of solvation -9.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.421 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.493 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.528 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.913 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds