Wall clock time and date at job start Sun Mar 7 2021 02:33:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50693 * 109.47661 * 239.99225 * 2 1 3 5 5 C 1.37814 * 119.94407 * 255.00209 * 4 2 1 6 6 C 1.39670 * 119.88067 * 179.97438 * 5 4 2 7 7 C 1.47719 * 120.11575 * 179.97438 * 6 5 4 8 8 O 1.21569 * 120.00647 * 0.02562 * 7 6 5 9 9 N 1.34777 * 119.99891 * 180.02562 * 7 6 5 10 10 C 1.46503 * 120.00038 * 180.02562 * 9 7 6 11 11 C 1.53000 * 109.47173 * 179.97438 * 10 9 7 12 12 C 1.52996 * 109.47338 * 179.97438 * 11 10 9 13 13 H 1.08998 * 112.85129 * 314.67252 * 12 11 10 14 14 C 1.53786 * 113.61340 * 85.86561 * 12 11 10 15 15 C 1.53950 * 87.02218 * 139.95136 * 14 12 11 16 16 H 1.08996 * 113.66760 * 220.06787 * 15 14 12 17 17 F 1.39902 * 113.61061 * 89.19894 * 15 14 12 18 18 C 1.53783 * 113.61660 * 183.47182 * 12 11 10 19 19 C 1.39626 * 119.76273 * 0.02562 * 6 5 4 20 20 C 1.37853 * 119.88179 * 359.97438 * 19 6 5 21 21 C 1.38639 * 120.12160 * 359.72661 * 20 19 6 22 22 F 1.35092 * 119.88387 * 180.27194 * 21 20 19 23 23 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 24 24 H 1.09000 * 109.46638 * 119.99419 * 2 1 3 25 25 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 26 26 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 27 27 H 1.08000 * 120.05845 * 0.02562 * 5 4 2 28 28 H 0.97001 * 120.00461 * 359.97438 * 9 7 6 29 29 H 1.08998 * 109.47424 * 299.99791 * 10 9 7 30 30 H 1.09000 * 109.46883 * 60.00143 * 10 9 7 31 31 H 1.09001 * 109.47367 * 299.99963 * 11 10 9 32 32 H 1.09006 * 109.47089 * 60.00068 * 11 10 9 33 33 H 1.09004 * 113.61294 * 254.53349 * 14 12 11 34 34 H 1.09004 * 113.61181 * 25.43296 * 14 12 11 35 35 H 1.08998 * 113.61160 * 334.56490 * 18 12 11 36 36 H 1.09000 * 113.61737 * 105.38944 * 18 12 11 37 37 H 1.08003 * 120.05745 * 179.97438 * 19 6 5 38 38 H 1.08006 * 119.94404 * 180.02562 * 20 19 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7105 -1.2303 5 6 2.4522 -1.9822 -1.1258 6 6 2.9170 -2.6397 -2.2670 7 6 3.4767 -4.0027 -2.1609 8 8 3.5329 -4.5543 -1.0790 9 7 3.9250 -4.6348 -3.2635 10 6 4.4796 -5.9867 -3.1584 11 6 4.9109 -6.4703 -4.5444 12 6 5.4906 -7.8819 -4.4346 13 1 6.1849 -7.9907 -3.6014 14 6 4.4275 -8.9912 -4.4994 15 6 5.4230 -9.7838 -5.3659 16 1 4.9555 -10.3135 -6.1959 17 9 6.2904 -10.5932 -4.6244 18 6 6.0338 -8.4300 -5.7648 19 6 2.8518 -2.0038 -3.5083 20 6 2.3290 -0.7316 -3.6015 21 6 1.8633 -0.0858 -2.4665 22 9 1.3470 1.1587 -2.5643 23 1 -0.3934 0.4417 0.7649 24 1 1.7923 -0.5138 0.8901 25 1 3.5346 1.7703 0.0322 26 1 1.5616 2.4678 -1.2086 27 1 2.5000 -2.4698 -0.1633 28 1 3.8799 -4.1949 -4.1269 29 1 5.3425 -5.9748 -2.4927 30 1 3.7215 -6.6603 -2.7587 31 1 4.0477 -6.4824 -5.2099 32 1 5.6688 -5.7968 -4.9447 33 1 4.2210 -9.4550 -3.5348 34 1 3.5225 -8.6980 -5.0316 35 1 5.5688 -7.9833 -6.6435 36 1 7.1223 -8.4402 -5.8209 37 1 3.2102 -2.5076 -4.3938 38 1 2.2777 -0.2389 -4.5613 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_12496548.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:08 Heat of formation + Delta-G solvation = -104.135146 kcal Electronic energy + Delta-G solvation = -23157.930828 eV Core-core repulsion = 19217.852427 eV Total energy + Delta-G solvation = -3940.078402 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.117 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -50.40875 -48.63423 -41.40079 -39.86991 -39.31909 -37.64045 -36.21741 -33.35925 -32.43722 -31.32748 -27.15107 -27.00051 -26.41637 -24.48822 -23.43243 -22.97260 -21.44777 -20.56767 -19.11692 -18.81515 -18.51378 -18.03406 -17.41866 -17.06596 -16.90138 -16.80288 -16.48374 -16.20428 -15.94081 -15.51715 -15.25468 -15.14944 -15.04288 -14.72634 -14.62900 -14.22260 -13.88676 -13.75120 -13.72845 -13.49012 -13.21923 -12.84988 -12.66626 -12.32028 -12.17293 -11.96793 -11.44489 -11.36549 -11.29109 -11.00116 -10.66746 -10.28600 -10.18093 -9.86691 -4.96830 -0.56821 -0.10565 1.22268 1.55398 1.68340 1.94475 1.99819 2.48787 2.91936 3.11447 3.12755 3.16131 3.41912 3.43805 3.45087 3.54910 3.64367 3.70569 3.82378 3.92228 4.02646 4.08062 4.19641 4.25331 4.40606 4.47887 4.49698 4.59946 4.63843 4.65219 4.73869 4.76097 4.85954 4.89067 4.91734 4.95636 5.00542 5.25211 5.31837 5.48187 6.31027 6.54076 7.06573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.070 4.070 3 Si 0.670 3.330 4 C -0.118 4.118 5 C -0.010 4.010 6 C -0.147 4.147 7 C 0.562 3.438 8 O -0.529 6.529 9 N -0.727 5.727 10 C 0.119 3.881 11 C -0.121 4.121 12 C -0.107 4.107 13 H 0.099 0.901 14 C -0.160 4.160 15 C 0.061 3.939 16 H 0.097 0.903 17 F -0.197 7.197 18 C -0.157 4.157 19 C -0.053 4.053 20 C -0.157 4.157 21 C 0.128 3.872 22 F -0.113 7.113 23 H 0.386 0.614 24 H 0.080 0.920 25 H -0.262 1.262 26 H -0.224 1.224 27 H 0.151 0.849 28 H 0.400 0.600 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.074 0.926 32 H 0.074 0.926 33 H 0.082 0.918 34 H 0.100 0.900 35 H 0.100 0.900 36 H 0.082 0.918 37 H 0.140 0.860 38 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.436 1.847 -2.640 3.251 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.180 4.180 3 Si 0.569 3.431 4 C -0.120 4.120 5 C -0.029 4.029 6 C -0.150 4.150 7 C 0.349 3.651 8 O -0.406 6.406 9 N -0.380 5.380 10 C -0.005 4.005 11 C -0.159 4.159 12 C -0.126 4.126 13 H 0.118 0.882 14 C -0.198 4.198 15 C 0.025 3.975 16 H 0.115 0.885 17 F -0.178 7.178 18 C -0.195 4.195 19 C -0.072 4.072 20 C -0.176 4.176 21 C 0.109 3.891 22 F -0.091 7.091 23 H 0.234 0.766 24 H 0.098 0.902 25 H -0.186 1.186 26 H -0.148 1.148 27 H 0.169 0.831 28 H 0.235 0.765 29 H 0.090 0.910 30 H 0.091 0.909 31 H 0.092 0.908 32 H 0.093 0.907 33 H 0.101 0.899 34 H 0.118 0.882 35 H 0.118 0.882 36 H 0.100 0.900 37 H 0.157 0.843 38 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 0.194 1.731 -2.827 3.321 hybrid contribution 0.043 -0.257 -0.649 0.700 sum 0.237 1.474 -3.476 3.783 Atomic orbital electron populations 1.86494 1.16631 1.81856 1.50004 1.24604 0.86291 1.10750 0.96370 0.95900 0.81599 0.78593 0.86968 1.19348 1.03907 0.95601 0.93099 1.21044 0.91507 0.91077 0.99303 1.19967 1.05201 0.95463 0.94368 1.18064 0.77721 0.85153 0.84198 1.90823 1.55532 1.67126 1.27157 1.45902 1.63926 1.17850 1.10273 1.21427 0.99144 0.82142 0.97743 1.21781 1.01353 0.96470 0.96306 1.22508 0.98118 0.93257 0.98698 0.88235 1.23720 0.97688 0.96781 1.01583 1.22415 0.90618 0.90224 0.94241 0.88546 1.92831 1.71421 1.74676 1.78830 1.23610 1.02391 0.95183 0.98319 1.21183 0.95532 0.93661 0.96823 1.21123 1.02047 0.96127 0.98281 1.17941 0.95905 0.80908 0.94385 1.91505 1.84188 1.37601 1.95849 0.76601 0.90185 1.18632 1.14751 0.83128 0.76456 0.90998 0.90932 0.90762 0.90687 0.89906 0.88167 0.88179 0.89952 0.84255 0.83420 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.39 12.86 -35.23 -0.45 -0.84 16 2 C -0.07 -0.03 2.79 36.00 0.10 0.07 16 3 Si 0.67 -0.14 30.78 -169.99 -5.23 -5.37 16 4 C -0.12 -0.27 4.80 -104.62 -0.50 -0.77 16 5 C -0.01 -0.02 9.21 -39.20 -0.36 -0.38 16 6 C -0.15 -0.17 5.87 -104.97 -0.62 -0.78 16 7 C 0.56 1.22 7.77 -12.39 -0.10 1.12 16 8 O -0.53 -3.18 16.34 5.30 0.09 -3.09 16 9 N -0.73 0.79 5.51 -61.29 -0.34 0.46 16 10 C 0.12 -0.14 5.67 -4.04 -0.02 -0.16 16 11 C -0.12 0.42 5.15 -26.73 -0.14 0.29 16 12 C -0.11 0.25 3.62 -89.81 -0.32 -0.07 16 13 H 0.10 -0.13 8.14 -51.93 -0.42 -0.56 16 14 C -0.16 0.34 7.54 -25.83 -0.19 0.14 16 15 C 0.06 -0.07 5.69 -25.83 -0.15 -0.21 16 16 H 0.10 -0.24 8.14 -51.93 -0.42 -0.67 16 17 F -0.20 -0.48 17.38 2.25 0.04 -0.44 16 18 C -0.16 0.39 7.54 -25.92 -0.20 0.19 16 19 C -0.05 0.06 9.54 -39.20 -0.37 -0.31 16 20 C -0.16 0.01 10.01 -39.57 -0.40 -0.38 16 21 C 0.13 0.30 6.67 -39.27 -0.26 0.04 16 22 F -0.11 -0.41 12.86 2.25 0.03 -0.38 16 23 H 0.39 -1.69 8.74 45.56 0.40 -1.29 16 24 H 0.08 -0.11 7.77 -51.93 -0.40 -0.51 16 25 H -0.26 -0.71 7.11 56.52 0.40 -0.31 16 26 H -0.22 -0.61 5.34 56.52 0.30 -0.30 16 27 H 0.15 0.26 7.59 -52.49 -0.40 -0.14 16 28 H 0.40 -1.62 6.50 -40.82 -0.27 -1.88 16 29 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 31 H 0.07 -0.32 7.88 -51.93 -0.41 -0.73 16 32 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 33 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 34 H 0.10 -0.35 7.92 -51.93 -0.41 -0.76 16 35 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16 36 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 37 H 0.14 -0.66 6.40 -52.48 -0.34 -1.00 16 38 H 0.15 -0.34 8.06 -52.48 -0.42 -0.76 16 LS Contribution 325.99 15.07 4.91 4.91 Total: 0.00 -8.97 325.99 -9.41 -18.38 By element: Atomic # 1 Polarization: -7.47 SS G_CDS: -4.92 Total: -12.39 kcal Atomic # 6 Polarization: 2.30 SS G_CDS: -3.53 Total: -1.23 kcal Atomic # 7 Polarization: 0.79 SS G_CDS: -0.34 Total: 0.46 kcal Atomic # 8 Polarization: -3.57 SS G_CDS: -0.37 Total: -3.93 kcal Atomic # 9 Polarization: -0.89 SS G_CDS: 0.07 Total: -0.82 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: -5.23 Total: -5.37 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -8.97 -9.41 -18.38 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12496548.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.759 kcal (2) G-P(sol) polarization free energy of solvation -8.966 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.726 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.409 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.376 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.135 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds