Wall clock time and date at job start Sun Mar 7 2021 02:33:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50693 * 109.47661 * 239.99225 * 2 1 3 5 5 C 1.37814 * 119.94407 * 255.00209 * 4 2 1 6 6 C 1.39670 * 119.88067 * 179.97438 * 5 4 2 7 7 C 1.47719 * 120.11575 * 179.97438 * 6 5 4 8 8 O 1.21569 * 120.00647 * 0.02562 * 7 6 5 9 9 N 1.34777 * 119.99891 * 180.02562 * 7 6 5 10 10 C 1.46503 * 120.00038 * 180.02562 * 9 7 6 11 11 C 1.53000 * 109.47173 * 179.97438 * 10 9 7 12 12 C 1.52996 * 109.47338 * 179.97438 * 11 10 9 13 13 H 1.08998 * 112.85129 * 314.67252 * 12 11 10 14 14 C 1.53786 * 113.61340 * 85.86561 * 12 11 10 15 15 C 1.53950 * 87.02218 * 139.95136 * 14 12 11 16 16 H 1.08996 * 113.66760 * 220.06787 * 15 14 12 17 17 F 1.39902 * 113.61061 * 89.19894 * 15 14 12 18 18 C 1.53783 * 113.61660 * 183.47182 * 12 11 10 19 19 C 1.39626 * 119.76273 * 0.02562 * 6 5 4 20 20 C 1.37853 * 119.88179 * 359.97438 * 19 6 5 21 21 C 1.38639 * 120.12160 * 359.72661 * 20 19 6 22 22 F 1.35092 * 119.88387 * 180.27194 * 21 20 19 23 23 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 24 24 H 1.09000 * 109.46638 * 119.99419 * 2 1 3 25 25 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 26 26 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 27 27 H 1.08000 * 120.05845 * 0.02562 * 5 4 2 28 28 H 0.97001 * 120.00461 * 359.97438 * 9 7 6 29 29 H 1.08998 * 109.47424 * 299.99791 * 10 9 7 30 30 H 1.09000 * 109.46883 * 60.00143 * 10 9 7 31 31 H 1.09001 * 109.47367 * 299.99963 * 11 10 9 32 32 H 1.09006 * 109.47089 * 60.00068 * 11 10 9 33 33 H 1.09004 * 113.61294 * 254.53349 * 14 12 11 34 34 H 1.09004 * 113.61181 * 25.43296 * 14 12 11 35 35 H 1.08998 * 113.61160 * 334.56490 * 18 12 11 36 36 H 1.09000 * 113.61737 * 105.38944 * 18 12 11 37 37 H 1.08003 * 120.05745 * 179.97438 * 19 6 5 38 38 H 1.08006 * 119.94404 * 180.02562 * 20 19 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7105 -1.2303 5 6 2.4522 -1.9822 -1.1258 6 6 2.9170 -2.6397 -2.2670 7 6 3.4767 -4.0027 -2.1609 8 8 3.5329 -4.5543 -1.0790 9 7 3.9250 -4.6348 -3.2635 10 6 4.4796 -5.9867 -3.1584 11 6 4.9109 -6.4703 -4.5444 12 6 5.4906 -7.8819 -4.4346 13 1 6.1849 -7.9907 -3.6014 14 6 4.4275 -8.9912 -4.4994 15 6 5.4230 -9.7838 -5.3659 16 1 4.9555 -10.3135 -6.1959 17 9 6.2904 -10.5932 -4.6244 18 6 6.0338 -8.4300 -5.7648 19 6 2.8518 -2.0038 -3.5083 20 6 2.3290 -0.7316 -3.6015 21 6 1.8633 -0.0858 -2.4665 22 9 1.3470 1.1587 -2.5643 23 1 -0.3934 0.4417 0.7649 24 1 1.7923 -0.5138 0.8901 25 1 3.5346 1.7703 0.0322 26 1 1.5616 2.4678 -1.2086 27 1 2.5000 -2.4698 -0.1633 28 1 3.8799 -4.1949 -4.1269 29 1 5.3425 -5.9748 -2.4927 30 1 3.7215 -6.6603 -2.7587 31 1 4.0477 -6.4824 -5.2099 32 1 5.6688 -5.7968 -4.9447 33 1 4.2210 -9.4550 -3.5348 34 1 3.5225 -8.6980 -5.0316 35 1 5.5688 -7.9833 -6.6435 36 1 7.1223 -8.4402 -5.8209 37 1 3.2102 -2.5076 -4.3938 38 1 2.2777 -0.2389 -4.5613 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_12496548.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:08 Heat of formation + Delta-G solvation = -103.323194 kcal Electronic energy + Delta-G solvation = -23157.895619 eV Core-core repulsion = 19217.852427 eV Total energy + Delta-G solvation = -3940.043193 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.117 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -50.56606 -48.67539 -41.48607 -39.84206 -39.26896 -37.64531 -36.27561 -33.36319 -32.46079 -31.26426 -27.11599 -26.85554 -26.37530 -24.49577 -23.45330 -22.84331 -21.51626 -20.42598 -19.14046 -18.88570 -18.53022 -18.11323 -17.37634 -17.11977 -16.88832 -16.80524 -16.52123 -16.19754 -15.95770 -15.50689 -15.27840 -15.19364 -15.02262 -14.82811 -14.59561 -14.23778 -13.92751 -13.79869 -13.62290 -13.44783 -13.10539 -12.87188 -12.54055 -12.34882 -11.98284 -11.82565 -11.59465 -11.37875 -11.19071 -10.95963 -10.67035 -10.36854 -10.19661 -9.91764 -4.98901 -0.64385 -0.12266 1.21058 1.46482 1.61834 1.92157 1.95699 2.42637 2.87142 3.15932 3.27772 3.34394 3.44394 3.47997 3.60172 3.71783 3.73843 3.85605 3.88838 4.00315 4.09073 4.20355 4.26808 4.42872 4.53340 4.58785 4.61793 4.71790 4.73725 4.77326 4.82258 4.85246 4.91488 4.96132 5.02471 5.10847 5.17920 5.28349 5.46075 5.49428 6.35354 6.80625 7.02007 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.079 4.079 3 Si 0.759 3.241 4 C -0.137 4.137 5 C -0.025 4.025 6 C -0.155 4.155 7 C 0.559 3.441 8 O -0.577 6.577 9 N -0.708 5.708 10 C 0.118 3.882 11 C -0.108 4.108 12 C -0.109 4.109 13 H 0.081 0.919 14 C -0.158 4.158 15 C 0.043 3.957 16 H 0.112 0.888 17 F -0.222 7.222 18 C -0.148 4.148 19 C -0.038 4.038 20 C -0.153 4.153 21 C 0.101 3.899 22 F -0.126 7.126 23 H 0.406 0.594 24 H 0.096 0.904 25 H -0.303 1.303 26 H -0.265 1.265 27 H 0.144 0.856 28 H 0.417 0.583 29 H 0.056 0.944 30 H 0.060 0.940 31 H 0.094 0.906 32 H 0.088 0.912 33 H 0.067 0.933 34 H 0.120 0.880 35 H 0.124 0.876 36 H 0.074 0.926 37 H 0.182 0.818 38 H 0.174 0.826 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.726 2.107 -4.554 5.069 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.189 4.189 3 Si 0.663 3.337 4 C -0.138 4.138 5 C -0.045 4.045 6 C -0.158 4.158 7 C 0.347 3.653 8 O -0.458 6.458 9 N -0.361 5.361 10 C -0.005 4.005 11 C -0.145 4.145 12 C -0.128 4.128 13 H 0.100 0.900 14 C -0.195 4.195 15 C 0.007 3.993 16 H 0.130 0.870 17 F -0.203 7.203 18 C -0.185 4.185 19 C -0.056 4.056 20 C -0.172 4.172 21 C 0.081 3.919 22 F -0.104 7.104 23 H 0.257 0.743 24 H 0.114 0.886 25 H -0.231 1.231 26 H -0.191 1.191 27 H 0.162 0.838 28 H 0.256 0.744 29 H 0.074 0.926 30 H 0.078 0.922 31 H 0.113 0.887 32 H 0.106 0.894 33 H 0.086 0.914 34 H 0.138 0.862 35 H 0.142 0.858 36 H 0.092 0.908 37 H 0.199 0.801 38 H 0.191 0.809 Dipole moment (debyes) X Y Z Total from point charges -0.113 1.990 -4.756 5.157 hybrid contribution 0.153 -0.361 -0.102 0.405 sum 0.039 1.629 -4.858 5.124 Atomic orbital electron populations 1.86443 1.16705 1.82406 1.51618 1.24758 0.86394 1.11188 0.96516 0.94976 0.77666 0.76398 0.84636 1.19593 1.04379 0.95893 0.93956 1.21089 0.92370 0.91315 0.99678 1.20031 1.05425 0.95113 0.95216 1.18280 0.77430 0.85440 0.84190 1.90799 1.57715 1.68251 1.29062 1.45778 1.62343 1.17675 1.10275 1.21431 0.98135 0.81829 0.99135 1.21704 1.02366 0.95607 0.94871 1.22467 0.97839 0.94053 0.98439 0.90016 1.23758 0.98307 0.96523 1.00923 1.22782 0.90903 0.90886 0.94745 0.87008 1.92775 1.72378 1.75575 1.79590 1.23609 1.02009 0.94035 0.98864 1.21567 0.93835 0.93053 0.97146 1.21477 1.00844 0.96313 0.98517 1.18340 0.97127 0.80911 0.95483 1.91479 1.84586 1.38391 1.95980 0.74273 0.88638 1.23083 1.19134 0.83842 0.74385 0.92599 0.92194 0.88728 0.89359 0.91449 0.86150 0.85795 0.90767 0.80090 0.80899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.05 12.86 -148.98 -1.92 -2.96 16 2 C -0.08 -0.13 2.79 71.23 0.20 0.07 16 3 Si 0.76 0.44 30.78 68.60 2.11 2.55 16 4 C -0.14 -0.75 4.80 -19.86 -0.10 -0.84 16 5 C -0.03 -0.13 9.21 22.52 0.21 0.07 16 6 C -0.15 -0.34 5.87 -20.09 -0.12 -0.46 16 7 C 0.56 2.58 7.77 86.75 0.67 3.25 16 8 O -0.58 -7.95 16.34 -3.93 -0.06 -8.01 16 9 N -0.71 2.33 5.51 -466.09 -2.57 -0.24 16 10 C 0.12 -0.31 5.67 86.38 0.49 0.18 16 11 C -0.11 0.95 5.15 30.59 0.16 1.11 16 12 C -0.11 0.56 3.62 -10.27 -0.04 0.52 16 13 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 14 C -0.16 0.72 7.54 31.18 0.24 0.95 16 15 C 0.04 -0.10 5.69 31.18 0.18 0.08 16 16 H 0.11 -0.66 8.14 -2.39 -0.02 -0.68 16 17 F -0.22 -1.33 17.38 44.97 0.78 -0.55 16 18 C -0.15 0.90 7.54 31.12 0.23 1.13 16 19 C -0.04 0.16 9.54 22.51 0.21 0.37 16 20 C -0.15 0.22 10.01 22.27 0.22 0.44 16 21 C 0.10 0.52 6.67 22.47 0.15 0.67 16 22 F -0.13 -1.04 12.86 44.97 0.58 -0.46 16 23 H 0.41 -3.56 8.74 -74.06 -0.65 -4.21 16 24 H 0.10 -0.20 7.77 -2.39 -0.02 -0.22 16 25 H -0.30 -2.19 7.11 99.48 0.71 -1.48 16 26 H -0.26 -1.87 5.34 99.48 0.53 -1.34 16 27 H 0.14 0.83 7.59 -2.91 -0.02 0.80 16 28 H 0.42 -4.54 6.50 -92.71 -0.60 -5.14 16 29 H 0.06 0.05 8.14 -2.39 -0.02 0.04 16 30 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 31 H 0.09 -1.15 7.88 -2.39 -0.02 -1.17 16 32 H 0.09 -0.94 8.14 -2.38 -0.02 -0.96 16 33 H 0.07 -0.09 8.14 -2.38 -0.02 -0.11 16 34 H 0.12 -1.05 7.92 -2.38 -0.02 -1.07 16 35 H 0.12 -1.34 8.10 -2.39 -0.02 -1.36 16 36 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 37 H 0.18 -2.43 6.40 -2.91 -0.02 -2.45 16 38 H 0.17 -1.20 8.06 -2.91 -0.02 -1.22 16 Total: 0.00 -24.50 325.99 1.35 -23.15 By element: Atomic # 1 Polarization: -20.72 SS G_CDS: -0.29 Total: -21.01 kcal Atomic # 6 Polarization: 4.82 SS G_CDS: 2.71 Total: 7.53 kcal Atomic # 7 Polarization: 2.33 SS G_CDS: -2.57 Total: -0.24 kcal Atomic # 8 Polarization: -9.00 SS G_CDS: -1.98 Total: -10.98 kcal Atomic # 9 Polarization: -2.37 SS G_CDS: 1.36 Total: -1.01 kcal Atomic # 14 Polarization: 0.44 SS G_CDS: 2.11 Total: 2.55 kcal Total: -24.50 1.35 -23.15 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12496548.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.174 kcal (2) G-P(sol) polarization free energy of solvation -24.500 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.674 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.351 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.149 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.323 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds