Wall clock time and date at job start Sun Mar 7 2021 02:33:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.46992 * 2 1 4 4 C 1.50704 * 109.46979 * 119.99868 * 2 1 3 5 5 C 1.35084 * 126.07138 * 254.97954 * 4 2 1 6 6 N 1.35049 * 107.97582 * 180.02562 * 5 4 2 7 7 C 1.46496 * 125.92843 * 179.97438 * 6 5 4 8 8 C 1.50705 * 109.46985 * 125.00496 * 7 6 5 9 9 O 1.21281 * 119.99767 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99951 * 180.02562 * 8 7 6 11 11 C 1.46500 * 119.99799 * 179.97438 * 10 8 7 12 12 C 1.53000 * 109.46884 * 179.97438 * 11 10 8 13 13 C 1.53003 * 109.47216 * 180.02562 * 12 11 10 14 14 H 1.09001 * 112.84808 * 43.79718 * 13 12 11 15 15 C 1.53781 * 113.61657 * 174.99939 * 13 12 11 16 16 C 1.53785 * 87.08061 * 139.97605 * 15 13 12 17 17 H 1.08996 * 113.61244 * 220.01813 * 16 15 13 18 18 F 1.39904 * 113.61078 * 89.19918 * 16 15 13 19 19 C 1.53783 * 87.08285 * 334.56865 * 16 15 13 20 20 N 1.40068 * 108.13447 * 359.78606 * 6 5 4 21 21 C 1.31625 * 108.11205 * 0.36017 * 20 6 5 22 22 C 1.48422 * 126.03665 * 179.91101 * 21 20 6 23 23 C 1.39325 * 120.11509 * 324.68839 * 22 21 20 24 24 C 1.38023 * 119.87376 * 179.97438 * 23 22 21 25 25 C 1.38325 * 120.12194 * 359.97438 * 24 23 22 26 26 C 1.38323 * 120.23744 * 0.02562 * 25 24 23 27 27 C 1.38017 * 120.12365 * 359.97438 * 26 25 24 28 28 H 0.96700 * 114.00381 * 299.99956 * 1 2 3 29 29 H 1.08996 * 109.47560 * 239.99893 * 2 1 3 30 30 H 1.48495 * 110.00124 * 178.67519 * 3 2 1 31 31 H 1.48496 * 110.00130 * 299.99941 * 3 2 1 32 32 H 1.08002 * 126.01610 * 0.02562 * 5 4 2 33 33 H 1.09002 * 109.47105 * 244.99865 * 7 6 5 34 34 H 1.08998 * 109.47583 * 4.99955 * 7 6 5 35 35 H 0.97002 * 120.00051 * 359.97438 * 10 8 7 36 36 H 1.08994 * 109.47042 * 299.99061 * 11 10 8 37 37 H 1.08998 * 109.47390 * 59.99697 * 11 10 8 38 38 H 1.09002 * 109.47149 * 299.99556 * 12 11 10 39 39 H 1.08998 * 109.47487 * 59.99616 * 12 11 10 40 40 H 1.08997 * 113.61392 * 254.52776 * 15 13 12 41 41 H 1.09003 * 113.61096 * 25.43338 * 15 13 12 42 42 H 1.08997 * 113.61274 * 270.88258 * 19 16 15 43 43 H 1.08992 * 113.61348 * 139.98343 * 19 16 15 44 44 H 1.08000 * 120.06679 * 359.95277 * 23 22 21 45 45 H 1.08006 * 119.94167 * 179.97438 * 24 23 22 46 46 H 1.07994 * 119.87991 * 179.74775 * 25 24 23 47 47 H 1.08001 * 119.93400 * 179.97438 * 26 25 24 48 48 H 1.07994 * 120.06242 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4632 -0.1249 2.3255 6 7 2.7891 -1.0990 3.2023 7 6 3.3952 -0.9009 4.5212 8 6 2.5420 -1.5651 5.5710 9 8 1.5274 -2.1463 5.2491 10 7 2.9060 -1.5124 6.8675 11 6 2.0763 -2.1577 7.8881 12 6 2.7094 -1.9509 9.2655 13 6 1.8433 -2.6252 10.3314 14 1 1.5024 -3.6171 10.0344 15 6 2.4554 -2.5808 11.7414 16 6 1.0355 -2.3052 12.2637 17 1 1.0006 -1.5665 13.0644 18 9 0.3136 -3.4656 12.5631 19 6 0.7222 -1.7237 10.8750 20 7 2.4430 -2.3313 2.6333 21 6 1.9301 -2.1027 1.4429 22 6 1.4325 -3.1303 0.4945 23 6 2.0672 -4.3675 0.4081 24 6 1.5999 -5.3197 -0.4752 25 6 0.5034 -5.0475 -1.2732 26 6 -0.1304 -3.8207 -1.1914 27 6 0.3285 -2.8614 -0.3117 28 1 -0.3934 0.4417 0.7650 29 1 1.7924 -0.5138 -0.8899 30 1 3.5345 1.7704 0.0323 31 1 1.5615 2.4679 -1.2085 32 1 2.6033 0.9357 2.4738 33 1 4.3927 -1.3403 4.5324 34 1 3.4659 0.1661 4.7321 35 1 3.7174 -1.0473 7.1250 36 1 1.0790 -1.7182 7.8766 37 1 2.0057 -3.2248 7.6776 38 1 3.7067 -2.3906 9.2768 39 1 2.7805 -0.8838 9.4763 40 1 2.8640 -3.5362 12.0703 41 1 3.1449 -1.7500 11.8920 42 1 0.9379 -0.6588 10.7888 43 1 -0.2684 -1.9873 10.5046 44 1 2.9234 -4.5811 1.0308 45 1 2.0914 -6.2790 -0.5434 46 1 0.1436 -5.7938 -1.9659 47 1 -0.9859 -3.6133 -1.8171 48 1 -0.1674 -1.9041 -0.2483 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_12622748.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:13 Heat of formation + Delta-G solvation = 17.572530 kcal Electronic energy + Delta-G solvation = -30976.836491 eV Core-core repulsion = 26529.346606 eV Total energy + Delta-G solvation = -4447.489886 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.164 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -48.64242 -42.42655 -40.74197 -39.63517 -39.45030 -37.74023 -36.18404 -34.74100 -32.49972 -32.00292 -31.56426 -31.18970 -28.78740 -27.05020 -26.29742 -25.56896 -23.94948 -23.27848 -22.98994 -21.88335 -21.42186 -20.85127 -20.57534 -18.75808 -18.41804 -17.66049 -17.43855 -17.27499 -17.03524 -16.84106 -16.47338 -16.38387 -16.12967 -15.94435 -15.67953 -15.55860 -15.40510 -15.27743 -14.73531 -14.62593 -14.36534 -14.11568 -14.00743 -13.92603 -13.82065 -13.72443 -13.55523 -13.33194 -13.18473 -12.69252 -12.39480 -12.29336 -12.18671 -11.97489 -11.94512 -11.81394 -11.41107 -11.37480 -11.31835 -11.09073 -10.55202 -10.25184 -10.23361 -9.65507 -9.60934 -9.13066 -5.07224 0.29092 0.72581 0.84352 1.22140 1.36449 1.45223 1.63185 1.90755 1.99142 2.01047 3.10531 3.11941 3.15016 3.29262 3.40999 3.44807 3.53439 3.55429 3.63063 3.68542 3.74804 3.83011 3.91999 4.08051 4.15863 4.23910 4.25927 4.29282 4.39283 4.46071 4.46388 4.51128 4.59427 4.63218 4.66336 4.74120 4.79697 4.84661 4.87782 4.91505 4.95888 4.96910 5.18896 5.22994 5.30632 5.39428 5.47865 5.79302 5.82190 5.85988 5.88232 6.27242 6.27497 6.67001 6.73148 7.05118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.028 4.028 3 Si 0.685 3.315 4 C -0.252 4.252 5 C 0.064 3.936 6 N -0.359 5.359 7 C 0.116 3.884 8 C 0.497 3.503 9 O -0.502 6.502 10 N -0.731 5.731 11 C 0.121 3.879 12 C -0.120 4.120 13 C -0.108 4.108 14 H 0.099 0.901 15 C -0.157 4.157 16 C 0.061 3.939 17 H 0.097 0.903 18 F -0.197 7.197 19 C -0.160 4.160 20 N -0.250 5.250 21 C 0.133 3.867 22 C -0.022 4.022 23 C -0.093 4.093 24 C -0.127 4.127 25 C -0.112 4.112 26 C -0.125 4.125 27 C -0.100 4.100 28 H 0.378 0.622 29 H 0.113 0.887 30 H -0.256 1.256 31 H -0.254 1.254 32 H 0.180 0.820 33 H 0.117 0.883 34 H 0.129 0.871 35 H 0.401 0.599 36 H 0.070 0.930 37 H 0.070 0.930 38 H 0.074 0.926 39 H 0.074 0.926 40 H 0.082 0.918 41 H 0.100 0.900 42 H 0.100 0.900 43 H 0.082 0.918 44 H 0.122 0.878 45 H 0.123 0.877 46 H 0.122 0.878 47 H 0.125 0.875 48 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.296 6.705 4.549 9.171 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.140 4.140 3 Si 0.587 3.413 4 C -0.264 4.264 5 C -0.081 4.081 6 N -0.140 5.140 7 C -0.009 4.009 8 C 0.280 3.720 9 O -0.375 6.375 10 N -0.385 5.385 11 C -0.002 4.002 12 C -0.157 4.157 13 C -0.126 4.126 14 H 0.117 0.883 15 C -0.195 4.195 16 C 0.025 3.975 17 H 0.115 0.885 18 F -0.177 7.177 19 C -0.197 4.197 20 N -0.070 5.070 21 C -0.033 4.033 22 C -0.024 4.024 23 C -0.112 4.112 24 C -0.145 4.145 25 C -0.131 4.131 26 C -0.143 4.143 27 C -0.119 4.119 28 H 0.226 0.774 29 H 0.130 0.870 30 H -0.181 1.181 31 H -0.178 1.178 32 H 0.197 0.803 33 H 0.135 0.865 34 H 0.147 0.853 35 H 0.236 0.764 36 H 0.088 0.912 37 H 0.088 0.912 38 H 0.093 0.907 39 H 0.092 0.908 40 H 0.100 0.900 41 H 0.118 0.882 42 H 0.118 0.882 43 H 0.100 0.900 44 H 0.140 0.860 45 H 0.141 0.859 46 H 0.140 0.860 47 H 0.143 0.857 48 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 4.498 5.702 4.381 8.482 hybrid contribution 0.377 0.075 -0.365 0.530 sum 4.875 5.777 4.016 8.560 Atomic orbital electron populations 1.86378 1.17754 1.80990 1.49418 1.24298 0.84504 1.09062 0.96094 0.95281 0.80672 0.77496 0.87867 1.20435 1.13376 0.93274 0.99269 1.22213 1.00292 0.95220 0.90369 1.47850 1.48545 1.04444 1.13196 1.21507 0.97114 1.03483 0.78830 1.20534 0.86720 0.81450 0.83301 1.90852 1.24874 1.41097 1.80629 1.45912 1.28509 1.57797 1.06314 1.21386 0.94558 0.98372 0.85927 1.21768 0.99610 1.01449 0.92921 1.22516 0.96129 1.00136 0.93868 0.88273 1.23617 0.96131 1.04009 0.95752 1.22377 0.92235 0.84781 0.98126 0.88549 1.92834 1.79163 1.51255 1.94487 1.23687 1.00456 1.00567 0.95033 1.77800 1.19146 1.01752 1.08327 1.20638 0.98106 0.92399 0.92136 1.17802 0.96778 0.92043 0.95811 1.21211 0.99667 0.92406 0.97901 1.21077 0.97326 0.99325 0.96814 1.21298 0.95742 0.97146 0.98899 1.21144 1.00325 0.93626 0.99222 1.21948 0.94926 1.01097 0.93882 0.77394 0.86968 1.18117 1.17810 0.80270 0.86513 0.85304 0.76439 0.91161 0.91214 0.90695 0.90772 0.89962 0.88156 0.88164 0.89963 0.85986 0.85868 0.86009 0.85721 0.82602 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.13 10.10 -35.23 -0.36 -0.49 16 2 C -0.03 -0.01 2.00 36.01 0.07 0.06 16 3 Si 0.69 -1.05 30.74 -169.99 -5.23 -6.27 16 4 C -0.25 -0.46 5.34 -104.76 -0.56 -1.01 16 5 C 0.06 -0.02 9.96 -17.26 -0.17 -0.19 16 6 N -0.36 -0.54 3.40 -62.58 -0.21 -0.75 16 7 C 0.12 -0.31 6.99 -5.19 -0.04 -0.35 16 8 C 0.50 0.17 7.86 -10.98 -0.09 0.09 16 9 O -0.50 -3.04 15.69 5.56 0.09 -2.95 16 10 N -0.73 2.07 5.56 -60.30 -0.33 1.74 16 11 C 0.12 -0.22 5.67 -4.04 -0.02 -0.24 16 12 C -0.12 0.49 5.16 -26.73 -0.14 0.35 16 13 C -0.11 0.28 3.63 -89.80 -0.33 -0.05 16 14 H 0.10 -0.13 8.13 -51.93 -0.42 -0.55 16 15 C -0.16 0.43 7.54 -25.92 -0.20 0.23 16 16 C 0.06 -0.08 5.69 -25.92 -0.15 -0.23 16 17 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 18 F -0.20 -0.46 17.39 2.25 0.04 -0.42 16 19 C -0.16 0.38 7.53 -25.91 -0.20 0.19 16 20 N -0.25 -1.36 11.62 33.43 0.39 -0.97 16 21 C 0.13 0.64 6.74 -82.78 -0.56 0.08 16 22 C -0.02 -0.11 5.80 -104.89 -0.61 -0.72 16 23 C -0.09 -0.42 9.75 -39.26 -0.38 -0.80 16 24 C -0.13 -0.41 10.03 -39.63 -0.40 -0.80 16 25 C -0.11 -0.31 10.04 -39.52 -0.40 -0.70 16 26 C -0.13 -0.39 10.03 -39.63 -0.40 -0.79 16 27 C -0.10 -0.41 8.94 -39.26 -0.35 -0.76 16 28 H 0.38 -1.25 8.70 45.56 0.40 -0.85 16 29 H 0.11 0.18 7.84 -51.93 -0.41 -0.22 16 30 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 31 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 32 H 0.18 -0.87 6.40 -52.49 -0.34 -1.21 16 33 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 34 H 0.13 -0.92 8.07 -51.93 -0.42 -1.34 16 35 H 0.40 -2.55 8.47 -40.82 -0.35 -2.90 16 36 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 37 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.07 -0.33 8.14 -51.93 -0.42 -0.76 16 39 H 0.07 -0.38 7.84 -51.93 -0.41 -0.79 16 40 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 41 H 0.10 -0.43 8.10 -51.93 -0.42 -0.85 16 42 H 0.10 -0.40 7.90 -51.93 -0.41 -0.81 16 43 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 44 H 0.12 0.50 8.06 -52.49 -0.42 0.08 16 45 H 0.12 0.14 8.06 -52.48 -0.42 -0.28 16 46 H 0.12 0.07 8.06 -52.49 -0.42 -0.35 16 47 H 0.12 0.15 8.06 -52.49 -0.42 -0.27 16 48 H 0.16 0.55 4.50 -52.49 -0.24 0.31 16 LS Contribution 402.58 15.07 6.07 6.07 Total: 0.00 -12.69 402.58 -11.30 -23.99 By element: Atomic # 1 Polarization: -7.44 SS G_CDS: -6.86 Total: -14.29 kcal Atomic # 6 Polarization: -0.75 SS G_CDS: -4.90 Total: -5.65 kcal Atomic # 7 Polarization: 0.18 SS G_CDS: -0.16 Total: 0.02 kcal Atomic # 8 Polarization: -3.17 SS G_CDS: -0.27 Total: -3.44 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: -5.23 Total: -6.27 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -12.69 -11.30 -23.99 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12622748.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.563 kcal (2) G-P(sol) polarization free energy of solvation -12.688 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.875 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.302 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.991 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.573 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds