Wall clock time and date at job start Sun Mar 7 2021 02:33:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.46992 * 2 1 4 4 C 1.50704 * 109.46979 * 119.99868 * 2 1 3 5 5 C 1.35084 * 126.07138 * 254.97954 * 4 2 1 6 6 N 1.35049 * 107.97582 * 180.02562 * 5 4 2 7 7 C 1.46496 * 125.92843 * 179.97438 * 6 5 4 8 8 C 1.50705 * 109.46985 * 125.00496 * 7 6 5 9 9 O 1.21281 * 119.99767 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99951 * 180.02562 * 8 7 6 11 11 C 1.46500 * 119.99799 * 179.97438 * 10 8 7 12 12 C 1.53000 * 109.46884 * 179.97438 * 11 10 8 13 13 C 1.53003 * 109.47216 * 180.02562 * 12 11 10 14 14 H 1.09001 * 112.84808 * 43.79718 * 13 12 11 15 15 C 1.53781 * 113.61657 * 174.99939 * 13 12 11 16 16 C 1.53785 * 87.08061 * 139.97605 * 15 13 12 17 17 H 1.08996 * 113.61244 * 220.01813 * 16 15 13 18 18 F 1.39904 * 113.61078 * 89.19918 * 16 15 13 19 19 C 1.53783 * 87.08285 * 334.56865 * 16 15 13 20 20 N 1.40068 * 108.13447 * 359.78606 * 6 5 4 21 21 C 1.31625 * 108.11205 * 0.36017 * 20 6 5 22 22 C 1.48422 * 126.03665 * 179.91101 * 21 20 6 23 23 C 1.39325 * 120.11509 * 324.68839 * 22 21 20 24 24 C 1.38023 * 119.87376 * 179.97438 * 23 22 21 25 25 C 1.38325 * 120.12194 * 359.97438 * 24 23 22 26 26 C 1.38323 * 120.23744 * 0.02562 * 25 24 23 27 27 C 1.38017 * 120.12365 * 359.97438 * 26 25 24 28 28 H 0.96700 * 114.00381 * 299.99956 * 1 2 3 29 29 H 1.08996 * 109.47560 * 239.99893 * 2 1 3 30 30 H 1.48495 * 110.00124 * 178.67519 * 3 2 1 31 31 H 1.48496 * 110.00130 * 299.99941 * 3 2 1 32 32 H 1.08002 * 126.01610 * 0.02562 * 5 4 2 33 33 H 1.09002 * 109.47105 * 244.99865 * 7 6 5 34 34 H 1.08998 * 109.47583 * 4.99955 * 7 6 5 35 35 H 0.97002 * 120.00051 * 359.97438 * 10 8 7 36 36 H 1.08994 * 109.47042 * 299.99061 * 11 10 8 37 37 H 1.08998 * 109.47390 * 59.99697 * 11 10 8 38 38 H 1.09002 * 109.47149 * 299.99556 * 12 11 10 39 39 H 1.08998 * 109.47487 * 59.99616 * 12 11 10 40 40 H 1.08997 * 113.61392 * 254.52776 * 15 13 12 41 41 H 1.09003 * 113.61096 * 25.43338 * 15 13 12 42 42 H 1.08997 * 113.61274 * 270.88258 * 19 16 15 43 43 H 1.08992 * 113.61348 * 139.98343 * 19 16 15 44 44 H 1.08000 * 120.06679 * 359.95277 * 23 22 21 45 45 H 1.08006 * 119.94167 * 179.97438 * 24 23 22 46 46 H 1.07994 * 119.87991 * 179.74775 * 25 24 23 47 47 H 1.08001 * 119.93400 * 179.97438 * 26 25 24 48 48 H 1.07994 * 120.06242 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4632 -0.1249 2.3255 6 7 2.7891 -1.0990 3.2023 7 6 3.3952 -0.9009 4.5212 8 6 2.5420 -1.5651 5.5710 9 8 1.5274 -2.1463 5.2491 10 7 2.9060 -1.5124 6.8675 11 6 2.0763 -2.1577 7.8881 12 6 2.7094 -1.9509 9.2655 13 6 1.8433 -2.6252 10.3314 14 1 1.5024 -3.6171 10.0344 15 6 2.4554 -2.5808 11.7414 16 6 1.0355 -2.3052 12.2637 17 1 1.0006 -1.5665 13.0644 18 9 0.3136 -3.4656 12.5631 19 6 0.7222 -1.7237 10.8750 20 7 2.4430 -2.3313 2.6333 21 6 1.9301 -2.1027 1.4429 22 6 1.4325 -3.1303 0.4945 23 6 2.0672 -4.3675 0.4081 24 6 1.5999 -5.3197 -0.4752 25 6 0.5034 -5.0475 -1.2732 26 6 -0.1304 -3.8207 -1.1914 27 6 0.3285 -2.8614 -0.3117 28 1 -0.3934 0.4417 0.7650 29 1 1.7924 -0.5138 -0.8899 30 1 3.5345 1.7704 0.0323 31 1 1.5615 2.4679 -1.2085 32 1 2.6033 0.9357 2.4738 33 1 4.3927 -1.3403 4.5324 34 1 3.4659 0.1661 4.7321 35 1 3.7174 -1.0473 7.1250 36 1 1.0790 -1.7182 7.8766 37 1 2.0057 -3.2248 7.6776 38 1 3.7067 -2.3906 9.2768 39 1 2.7805 -0.8838 9.4763 40 1 2.8640 -3.5362 12.0703 41 1 3.1449 -1.7500 11.8920 42 1 0.9379 -0.6588 10.7888 43 1 -0.2684 -1.9873 10.5046 44 1 2.9234 -4.5811 1.0308 45 1 2.0914 -6.2790 -0.5434 46 1 0.1436 -5.7938 -1.9659 47 1 -0.9859 -3.6133 -1.8171 48 1 -0.1674 -1.9041 -0.2483 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_12622748.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:12 Heat of formation + Delta-G solvation = 15.528021 kcal Electronic energy + Delta-G solvation = -30976.925148 eV Core-core repulsion = 26529.346606 eV Total energy + Delta-G solvation = -4447.578542 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.164 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -48.68314 -42.47938 -40.74733 -39.79206 -39.35397 -37.73726 -36.14802 -34.78165 -32.52207 -32.06572 -31.69361 -31.28656 -28.75661 -26.85124 -26.24290 -25.56099 -24.06339 -23.50087 -22.82942 -21.89826 -21.43542 -20.95490 -20.42476 -18.75290 -18.36626 -17.77814 -17.37055 -17.21064 -16.96689 -16.77497 -16.51467 -16.35857 -16.14536 -15.96189 -15.84401 -15.51931 -15.40912 -15.32113 -14.74333 -14.64893 -14.40639 -14.23237 -14.12390 -13.91964 -13.80393 -13.68219 -13.50503 -13.27997 -13.07114 -12.53903 -12.45750 -12.38610 -12.14471 -11.98055 -11.89325 -11.81215 -11.54752 -11.36225 -11.19414 -11.00760 -10.64566 -10.24563 -10.18543 -9.89733 -9.75006 -9.29175 -4.96208 0.05391 0.45221 0.84454 1.31479 1.44668 1.49847 1.66379 1.79927 2.07257 2.11946 2.88351 3.27836 3.34105 3.37652 3.57657 3.60444 3.61428 3.72158 3.74877 3.87777 3.96836 4.01000 4.10320 4.11136 4.14308 4.19429 4.25572 4.33248 4.43557 4.43869 4.51409 4.58866 4.61549 4.72914 4.74101 4.80036 4.82492 4.84063 4.92452 4.98867 5.02144 5.12485 5.16265 5.18699 5.30562 5.36598 5.48897 5.54816 5.60387 5.63013 5.94868 6.04150 6.48203 6.61412 6.87381 7.18521 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.043 4.043 3 Si 0.806 3.194 4 C -0.270 4.270 5 C 0.080 3.920 6 N -0.360 5.360 7 C 0.110 3.890 8 C 0.492 3.508 9 O -0.570 6.570 10 N -0.711 5.711 11 C 0.123 3.877 12 C -0.104 4.104 13 C -0.112 4.112 14 H 0.075 0.925 15 C -0.147 4.147 16 C 0.042 3.958 17 H 0.114 0.886 18 F -0.223 7.223 19 C -0.156 4.156 20 N -0.299 5.299 21 C 0.106 3.894 22 C -0.040 4.040 23 C -0.113 4.113 24 C -0.132 4.132 25 C -0.118 4.118 26 C -0.131 4.131 27 C -0.113 4.113 28 H 0.393 0.607 29 H 0.090 0.910 30 H -0.280 1.280 31 H -0.302 1.302 32 H 0.231 0.769 33 H 0.139 0.861 34 H 0.186 0.814 35 H 0.423 0.577 36 H 0.054 0.946 37 H 0.041 0.959 38 H 0.086 0.914 39 H 0.099 0.901 40 H 0.071 0.929 41 H 0.127 0.873 42 H 0.124 0.876 43 H 0.064 0.936 44 H 0.115 0.885 45 H 0.141 0.859 46 H 0.146 0.854 47 H 0.143 0.857 48 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.912 9.479 5.371 12.396 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.152 4.152 3 Si 0.710 3.290 4 C -0.282 4.282 5 C -0.065 4.065 6 N -0.142 5.142 7 C -0.013 4.013 8 C 0.277 3.723 9 O -0.448 6.448 10 N -0.366 5.366 11 C -0.001 4.001 12 C -0.142 4.142 13 C -0.131 4.131 14 H 0.093 0.907 15 C -0.185 4.185 16 C 0.006 3.994 17 H 0.132 0.868 18 F -0.204 7.204 19 C -0.193 4.193 20 N -0.120 5.120 21 C -0.059 4.059 22 C -0.042 4.042 23 C -0.132 4.132 24 C -0.150 4.150 25 C -0.136 4.136 26 C -0.149 4.149 27 C -0.132 4.132 28 H 0.243 0.757 29 H 0.107 0.893 30 H -0.207 1.207 31 H -0.230 1.230 32 H 0.247 0.753 33 H 0.157 0.843 34 H 0.203 0.797 35 H 0.261 0.739 36 H 0.073 0.927 37 H 0.059 0.941 38 H 0.104 0.896 39 H 0.117 0.883 40 H 0.090 0.910 41 H 0.145 0.855 42 H 0.142 0.858 43 H 0.083 0.917 44 H 0.133 0.867 45 H 0.159 0.841 46 H 0.164 0.836 47 H 0.161 0.839 48 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 6.144 8.459 5.262 11.704 hybrid contribution -0.137 -0.816 -0.589 1.016 sum 6.007 7.642 4.674 10.786 Atomic orbital electron populations 1.86326 1.17962 1.81548 1.50440 1.24644 0.84606 1.11127 0.94833 0.93986 0.77078 0.72825 0.85062 1.20665 1.14579 0.92241 1.00697 1.22928 0.97779 0.96920 0.88866 1.48172 1.47926 1.03640 1.14442 1.22023 0.96641 1.06676 0.75961 1.21161 0.86087 0.80534 0.84483 1.90836 1.27981 1.44208 1.81745 1.45757 1.28780 1.56756 1.05262 1.21277 0.94579 0.96673 0.87620 1.21678 0.99263 1.02814 0.90445 1.22478 0.96594 0.99259 0.94770 0.90653 1.23620 0.95571 1.04499 0.94795 1.22770 0.93047 0.84267 0.99335 0.86816 1.92775 1.79981 1.52947 1.94742 1.23725 0.99601 1.01839 0.94149 1.77689 1.20702 1.04591 1.09053 1.20867 0.98900 0.93847 0.92258 1.18101 0.97178 0.92590 0.96313 1.21319 1.00074 0.93079 0.98763 1.21350 0.97555 0.99745 0.96362 1.21602 0.95403 0.97546 0.99052 1.21446 1.00791 0.93630 0.99056 1.22083 0.95061 1.01629 0.94393 0.75654 0.89266 1.20671 1.23033 0.75250 0.84301 0.79716 0.73894 0.92717 0.94064 0.89573 0.88274 0.90997 0.85520 0.85752 0.91722 0.86672 0.84090 0.83639 0.83931 0.82474 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.79 10.10 -148.98 -1.50 -2.29 16 2 C -0.04 -0.07 2.00 71.24 0.14 0.08 16 3 Si 0.81 -3.40 30.74 68.60 2.11 -1.29 16 4 C -0.27 -1.15 5.34 -19.95 -0.11 -1.26 16 5 C 0.08 -0.17 9.96 83.47 0.83 0.67 16 6 N -0.36 -0.89 3.40 -351.90 -1.20 -2.09 16 7 C 0.11 -0.82 6.99 85.64 0.60 -0.22 16 8 C 0.49 0.27 7.86 87.66 0.69 0.96 16 9 O -0.57 -8.10 15.69 -3.03 -0.05 -8.15 16 10 N -0.71 4.72 5.56 -463.07 -2.57 2.15 16 11 C 0.12 -0.36 5.67 86.38 0.49 0.13 16 12 C -0.10 0.98 5.16 30.60 0.16 1.13 16 13 C -0.11 0.54 3.63 -10.26 -0.04 0.51 16 14 H 0.08 -0.01 8.13 -2.39 -0.02 -0.03 16 15 C -0.15 0.90 7.54 31.12 0.23 1.13 16 16 C 0.04 -0.10 5.69 31.12 0.18 0.08 16 17 H 0.11 -0.72 8.14 -2.39 -0.02 -0.74 16 18 F -0.22 -1.43 17.39 44.97 0.78 -0.64 16 19 C -0.16 0.74 7.53 31.12 0.23 0.98 16 20 N -0.30 -3.85 11.62 -48.16 -0.56 -4.41 16 21 C 0.11 1.27 6.74 42.53 0.29 1.55 16 22 C -0.04 -0.52 5.80 -20.04 -0.12 -0.64 16 23 C -0.11 -1.36 9.75 22.48 0.22 -1.14 16 24 C -0.13 -1.07 10.03 22.24 0.22 -0.84 16 25 C -0.12 -0.75 10.04 22.31 0.22 -0.53 16 26 C -0.13 -1.00 10.03 22.24 0.22 -0.78 16 27 C -0.11 -1.20 8.94 22.48 0.20 -1.00 16 28 H 0.39 -2.52 8.70 -74.06 -0.64 -3.16 16 29 H 0.09 0.48 7.84 -2.39 -0.02 0.47 16 30 H -0.28 0.06 7.11 99.48 0.71 0.76 16 31 H -0.30 -1.17 7.11 99.48 0.71 -0.46 16 32 H 0.23 -3.19 6.40 -2.91 -0.02 -3.21 16 33 H 0.14 -1.61 8.14 -2.39 -0.02 -1.63 16 34 H 0.19 -3.53 8.07 -2.39 -0.02 -3.55 16 35 H 0.42 -6.53 8.47 -92.71 -0.79 -7.31 16 36 H 0.05 0.03 8.14 -2.39 -0.02 0.01 16 37 H 0.04 0.12 8.14 -2.39 -0.02 0.10 16 38 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 39 H 0.10 -1.35 7.84 -2.39 -0.02 -1.37 16 40 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 41 H 0.13 -1.43 8.10 -2.39 -0.02 -1.45 16 42 H 0.12 -1.21 7.90 -2.39 -0.02 -1.23 16 43 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 44 H 0.12 1.39 8.06 -2.91 -0.02 1.36 16 45 H 0.14 0.47 8.06 -2.91 -0.02 0.45 16 46 H 0.15 0.14 8.06 -2.91 -0.02 0.12 16 47 H 0.14 0.43 8.06 -2.91 -0.02 0.41 16 48 H 0.16 1.49 4.50 -2.91 -0.01 1.48 16 Total: 0.00 -37.53 402.58 1.29 -36.25 By element: Atomic # 1 Polarization: -19.94 SS G_CDS: -0.39 Total: -20.33 kcal Atomic # 6 Polarization: -3.86 SS G_CDS: 4.67 Total: 0.81 kcal Atomic # 7 Polarization: -0.02 SS G_CDS: -4.33 Total: -4.35 kcal Atomic # 8 Polarization: -8.88 SS G_CDS: -1.55 Total: -10.44 kcal Atomic # 9 Polarization: -1.43 SS G_CDS: 0.78 Total: -0.64 kcal Atomic # 14 Polarization: -3.40 SS G_CDS: 2.11 Total: -1.29 kcal Total: -37.53 1.29 -36.25 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12622748.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.774 kcal (2) G-P(sol) polarization free energy of solvation -37.534 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.240 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.288 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.246 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.528 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds