Wall clock time and date at job start Sun Mar 7 2021 02:33:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35890 * 116.99849 * 2 1 4 4 C 1.38811 * 119.93349 * 180.02562 * 3 2 1 5 5 C 1.37922 * 120.06119 * 180.02562 * 4 3 2 6 6 C 1.39350 * 119.93831 * 359.97438 * 5 4 3 7 7 C 1.48414 * 120.06449 * 179.97438 * 6 5 4 8 8 N 1.31628 * 126.03631 * 325.28498 * 7 6 5 9 9 N 1.40069 * 108.10249 * 180.19585 * 8 7 6 10 10 C 1.46505 * 125.92531 * 179.82181 * 9 8 7 11 11 C 1.50703 * 109.47064 * 304.68792 * 10 9 8 12 12 O 1.21278 * 119.99985 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99944 * 180.02562 * 11 10 9 14 14 C 1.46499 * 119.99872 * 180.02562 * 13 11 10 15 15 C 1.53000 * 109.46840 * 180.02562 * 14 13 11 16 16 C 1.53001 * 109.46886 * 180.02562 * 15 14 13 17 17 H 1.08993 * 112.85258 * 43.79888 * 16 15 14 18 18 C 1.53782 * 113.61585 * 175.00132 * 16 15 14 19 19 C 1.53780 * 87.08566 * 139.97549 * 18 16 15 20 20 H 1.08994 * 113.61710 * 219.93505 * 19 18 16 21 21 F 1.39900 * 113.61283 * 89.11470 * 19 18 16 22 22 C 1.53787 * 113.61117 * 272.49572 * 16 15 14 23 23 C 1.35032 * 108.14585 * 359.55418 * 9 8 7 24 24 C 1.35093 * 107.97718 * 0.26732 * 23 9 8 25 25 C 1.50700 * 126.07375 * 179.97438 * 24 23 9 26 26 O 1.42903 * 109.46936 * 255.02064 * 25 24 23 27 27 Si 1.86294 * 109.47302 * 15.02096 * 25 24 23 28 28 C 1.39352 * 119.87214 * 0.25442 * 6 5 4 29 29 C 1.37928 * 119.93430 * 359.51138 * 28 6 5 30 30 H 1.08998 * 109.47011 * 299.99686 * 1 2 3 31 31 H 1.09005 * 109.47396 * 59.99951 * 1 2 3 32 32 H 1.09001 * 109.47305 * 179.97438 * 1 2 3 33 33 H 1.08004 * 119.97336 * 359.97438 * 4 3 2 34 34 H 1.08006 * 120.03430 * 179.97438 * 5 4 3 35 35 H 1.09002 * 109.47068 * 184.68824 * 10 9 8 36 36 H 1.09001 * 109.47372 * 64.68736 * 10 9 8 37 37 H 0.97000 * 119.99708 * 359.97438 * 13 11 10 38 38 H 1.09002 * 109.47391 * 59.99686 * 14 13 11 39 39 H 1.09001 * 109.46813 * 299.99742 * 14 13 11 40 40 H 1.09001 * 109.47194 * 299.99493 * 15 14 13 41 41 H 1.08992 * 109.47399 * 59.99666 * 15 14 13 42 42 H 1.09003 * 113.61406 * 254.52885 * 18 16 15 43 43 H 1.09000 * 113.61443 * 25.34143 * 18 16 15 44 44 H 1.09002 * 113.61591 * 334.56363 * 22 16 15 45 45 H 1.08998 * 113.61477 * 105.46999 * 22 16 15 46 46 H 1.08002 * 126.00983 * 180.29947 * 23 9 8 47 47 H 1.09000 * 109.46866 * 135.02594 * 25 24 23 48 48 H 0.96702 * 113.99920 * 60.00035 * 26 25 24 49 49 H 1.48503 * 109.99925 * 180.02562 * 27 25 24 50 50 H 1.48507 * 110.00215 * 301.32176 * 27 25 24 51 51 H 1.07994 * 120.03456 * 179.72621 * 28 6 5 52 52 H 1.07996 * 119.97077 * 180.23016 * 29 28 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4322 1.2819 -0.0005 5 6 4.0611 2.5094 0.0000 6 6 3.3034 3.6789 0.0005 7 6 3.9772 5.0013 0.0017 8 7 5.1081 5.2936 0.6085 9 7 5.3950 6.6433 0.3676 10 6 6.5622 7.3760 0.8649 11 6 6.6286 7.2561 2.3657 12 8 5.7845 6.6207 2.9611 13 7 7.6261 7.8549 3.0461 14 6 7.6910 7.7377 4.5049 15 6 8.9091 8.5041 5.0243 16 6 8.9772 8.3813 6.5479 17 1 8.7832 7.3682 6.9000 18 6 10.2364 9.0162 7.1614 19 6 9.3308 9.5283 8.2939 20 1 9.5687 10.5411 8.6190 21 9 9.2049 8.6310 9.3599 22 6 8.1683 9.4587 7.2895 23 6 4.4123 7.1504 -0.4073 24 6 3.5223 6.1636 -0.6509 25 6 2.2659 6.2852 -1.4741 26 8 1.1306 6.3258 -0.6072 27 14 2.3333 7.8499 -2.4829 28 6 1.9119 3.6045 0.0059 29 6 1.2885 2.3741 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3634 0.5139 -0.8900 32 1 -0.3634 -1.0277 -0.0005 33 1 4.0190 0.3751 -0.0005 34 1 5.1398 2.5642 0.0000 35 1 6.4766 8.4268 0.5878 36 1 7.4680 6.9573 0.4265 37 1 8.3014 8.3627 2.5697 38 1 7.7772 6.6870 4.7816 39 1 6.7850 8.1558 4.9436 40 1 9.8153 8.0865 4.5857 41 1 8.8224 9.5548 4.7477 42 1 10.9770 8.2871 7.4903 43 1 10.6664 9.8105 6.5514 44 1 8.0322 10.3751 6.7152 45 1 7.2394 9.0869 7.7218 46 1 4.3492 8.1660 -0.7693 47 1 2.1836 5.4264 -2.1404 48 1 1.1370 7.0663 0.0148 49 1 1.0995 7.9817 -3.2988 50 1 2.4776 9.0258 -1.5874 51 1 1.3222 4.5092 0.0108 52 1 0.2101 2.3158 0.0009 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_12622750.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:16 Heat of formation + Delta-G solvation = -18.602407 kcal Electronic energy + Delta-G solvation = -35188.742819 eV Core-core repulsion = 30265.464459 eV Total energy + Delta-G solvation = -4923.278360 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.179 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -48.69987 -42.47437 -41.04994 -40.68005 -39.38858 -38.47944 -37.81613 -36.16548 -34.61275 -32.29183 -32.24531 -31.81491 -30.96572 -28.93020 -28.00471 -26.86840 -26.24884 -25.43762 -23.80782 -23.67304 -22.84036 -21.89622 -21.47044 -20.97581 -20.44291 -19.17283 -18.80119 -18.33795 -17.46402 -17.30512 -17.14804 -17.06772 -16.76203 -16.70588 -16.67000 -16.37635 -16.24705 -16.03458 -15.58506 -15.49287 -15.39767 -15.24050 -14.90850 -14.66503 -14.58278 -14.48810 -14.12147 -13.86203 -13.78226 -13.68469 -13.52419 -13.30213 -13.09341 -13.02186 -12.80579 -12.55488 -12.48729 -12.19759 -12.14086 -11.99542 -11.82843 -11.65176 -11.54491 -11.33617 -11.20556 -10.98815 -10.47041 -10.38722 -10.20425 -10.04213 -9.64107 -8.94616 -4.81544 0.06020 0.33973 0.83950 1.32580 1.45238 1.48201 1.67359 1.70741 2.07034 2.11138 2.31062 2.79024 3.26155 3.32635 3.38913 3.46206 3.58540 3.59748 3.70918 3.72820 3.86072 3.88027 3.90227 3.96830 4.09027 4.15644 4.21410 4.23831 4.25530 4.35003 4.36731 4.41769 4.44352 4.55364 4.57129 4.59019 4.70424 4.71005 4.72308 4.78076 4.80323 4.90956 4.91511 5.00127 5.06645 5.08521 5.10688 5.16996 5.32595 5.34679 5.47178 5.53243 5.57994 5.70983 5.94668 6.36709 6.46591 6.59022 6.65028 7.16829 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.334 6.334 3 C 0.124 3.876 4 C -0.167 4.167 5 C -0.060 4.060 6 C -0.071 4.071 7 C 0.117 3.883 8 N -0.297 5.297 9 N -0.360 5.360 10 C 0.111 3.889 11 C 0.491 3.509 12 O -0.571 6.571 13 N -0.711 5.711 14 C 0.122 3.878 15 C -0.104 4.104 16 C -0.112 4.112 17 H 0.076 0.924 18 C -0.147 4.147 19 C 0.042 3.958 20 H 0.114 0.886 21 F -0.223 7.223 22 C -0.157 4.157 23 C 0.076 3.924 24 C -0.263 4.263 25 C -0.052 4.052 26 O -0.547 6.547 27 Si 0.785 3.215 28 C -0.066 4.066 29 C -0.213 4.213 30 H 0.062 0.938 31 H 0.066 0.934 32 H 0.119 0.881 33 H 0.141 0.859 34 H 0.132 0.868 35 H 0.180 0.820 36 H 0.145 0.855 37 H 0.423 0.577 38 H 0.042 0.958 39 H 0.052 0.948 40 H 0.087 0.913 41 H 0.098 0.902 42 H 0.072 0.928 43 H 0.127 0.873 44 H 0.123 0.877 45 H 0.063 0.937 46 H 0.219 0.781 47 H 0.106 0.894 48 H 0.384 0.616 49 H -0.307 1.307 50 H -0.262 1.262 51 H 0.159 0.841 52 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.734 9.739 -5.513 12.574 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.248 6.248 3 C 0.078 3.922 4 C -0.185 4.185 5 C -0.079 4.079 6 C -0.073 4.073 7 C -0.048 4.048 8 N -0.119 5.119 9 N -0.141 5.141 10 C -0.012 4.012 11 C 0.276 3.724 12 O -0.449 6.449 13 N -0.366 5.366 14 C -0.002 4.002 15 C -0.142 4.142 16 C -0.131 4.131 17 H 0.094 0.906 18 C -0.184 4.184 19 C 0.006 3.994 20 H 0.132 0.868 21 F -0.204 7.204 22 C -0.194 4.194 23 C -0.070 4.070 24 C -0.275 4.275 25 C -0.160 4.160 26 O -0.355 6.355 27 Si 0.688 3.312 28 C -0.085 4.085 29 C -0.232 4.232 30 H 0.081 0.919 31 H 0.085 0.915 32 H 0.137 0.863 33 H 0.159 0.841 34 H 0.150 0.850 35 H 0.198 0.802 36 H 0.163 0.837 37 H 0.261 0.739 38 H 0.061 0.939 39 H 0.070 0.930 40 H 0.106 0.894 41 H 0.116 0.884 42 H 0.091 0.909 43 H 0.145 0.855 44 H 0.141 0.859 45 H 0.082 0.918 46 H 0.235 0.765 47 H 0.124 0.876 48 H 0.234 0.766 49 H -0.235 1.235 50 H -0.188 1.188 51 H 0.176 0.824 52 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 5.809 8.978 -4.747 11.699 hybrid contribution -1.290 -0.065 1.115 1.707 sum 4.519 8.913 -3.631 10.632 Atomic orbital electron populations 1.23354 0.76429 1.05618 1.02281 1.86049 1.23484 1.26846 1.88397 1.19336 0.92620 0.84718 0.95522 1.20506 0.91758 0.98810 1.07462 1.21083 1.00074 0.90731 0.96034 1.17902 0.92978 0.89593 1.06851 1.20717 0.93185 0.94155 0.96715 1.77696 1.17575 0.94007 1.22599 1.48121 1.19842 1.07151 1.39002 1.22004 0.88375 1.00713 0.90140 1.21226 0.81445 0.78794 0.90925 1.90831 1.41110 1.41775 1.71208 1.45764 1.28933 1.54060 1.07829 1.21279 0.99420 0.99908 0.79574 1.21676 0.96891 1.01911 0.93708 1.22481 0.96788 0.98687 0.95154 0.90593 1.23614 0.96470 1.02017 0.96316 1.22767 0.99877 0.92586 0.84154 0.86796 1.92775 1.96852 1.71383 1.59412 1.23733 0.97065 1.01197 0.97446 1.22844 0.88478 1.00749 0.94914 1.20539 1.02486 0.93140 1.11292 1.24630 0.81749 1.14123 0.95533 1.86437 1.43974 1.53082 1.52056 0.94023 0.85144 0.72178 0.79877 1.21779 0.93403 0.99109 0.94159 1.21403 1.01088 0.91604 1.09071 0.91925 0.91526 0.86305 0.84126 0.85046 0.80239 0.83717 0.73870 0.93911 0.92968 0.89397 0.88383 0.90902 0.85499 0.85854 0.91803 0.76461 0.87604 0.76640 1.23469 1.18774 0.82382 0.83472 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 113.37 1.11 1.12 16 2 O -0.33 -2.90 10.49 -92.31 -0.97 -3.87 16 3 C 0.12 1.25 6.69 22.55 0.15 1.40 16 4 C -0.17 -1.70 9.97 22.33 0.22 -1.48 16 5 C -0.06 -0.66 9.74 22.46 0.22 -0.44 16 6 C -0.07 -0.83 5.80 -20.03 -0.12 -0.95 16 7 C 0.12 1.24 6.74 42.53 0.29 1.53 16 8 N -0.30 -3.49 11.65 -48.16 -0.56 -4.05 16 9 N -0.36 -0.79 3.39 -351.89 -1.19 -1.98 16 10 C 0.11 -0.82 6.98 85.63 0.60 -0.22 16 11 C 0.49 0.48 7.86 87.66 0.69 1.17 16 12 O -0.57 -8.39 15.71 -3.02 -0.05 -8.44 16 13 N -0.71 4.40 5.56 -463.05 -2.57 1.83 16 14 C 0.12 -0.30 5.66 86.38 0.49 0.19 16 15 C -0.10 0.94 5.16 30.59 0.16 1.10 16 16 C -0.11 0.50 3.63 -10.26 -0.04 0.47 16 17 H 0.08 0.01 8.13 -2.39 -0.02 -0.01 16 18 C -0.15 0.86 7.54 31.12 0.23 1.10 16 19 C 0.04 -0.09 5.69 31.12 0.18 0.09 16 20 H 0.11 -0.69 8.14 -2.39 -0.02 -0.71 16 21 F -0.22 -1.48 17.38 44.97 0.78 -0.70 16 22 C -0.16 0.67 7.53 31.12 0.23 0.90 16 23 C 0.08 -0.13 9.96 83.48 0.83 0.70 16 24 C -0.26 -0.92 5.34 -19.95 -0.11 -1.02 16 25 C -0.05 -0.04 2.00 71.24 0.14 0.10 16 26 O -0.55 -1.59 10.10 -148.98 -1.50 -3.10 16 27 Si 0.78 -3.49 30.81 68.60 2.11 -1.38 16 28 C -0.07 -0.66 8.94 22.46 0.20 -0.45 16 29 C -0.21 -1.79 9.02 22.34 0.20 -1.59 16 30 H 0.06 -0.04 7.65 -2.39 -0.02 -0.05 16 31 H 0.07 -0.09 7.66 -2.38 -0.02 -0.10 16 32 H 0.12 -0.39 8.14 -2.39 -0.02 -0.41 16 33 H 0.14 1.03 8.06 -2.91 -0.02 1.00 16 34 H 0.13 1.28 8.06 -2.91 -0.02 1.25 16 35 H 0.18 -3.27 8.07 -2.39 -0.02 -3.29 16 36 H 0.15 -1.79 8.14 -2.39 -0.02 -1.81 16 37 H 0.42 -6.37 8.47 -92.71 -0.79 -7.16 16 38 H 0.04 0.14 8.14 -2.39 -0.02 0.12 16 39 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 40 H 0.09 -0.95 8.14 -2.39 -0.02 -0.97 16 41 H 0.10 -1.28 7.84 -2.39 -0.02 -1.30 16 42 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 43 H 0.13 -1.41 8.10 -2.39 -0.02 -1.43 16 44 H 0.12 -1.12 7.90 -2.39 -0.02 -1.14 16 45 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 46 H 0.22 -2.44 6.33 -2.91 -0.02 -2.46 16 47 H 0.11 0.22 7.84 -2.39 -0.02 0.20 16 48 H 0.38 -0.91 8.70 -74.06 -0.64 -1.55 16 49 H -0.31 -1.25 7.11 99.48 0.71 -0.54 16 50 H -0.26 1.05 6.99 99.48 0.70 1.75 16 51 H 0.16 1.41 4.51 -2.91 -0.01 1.40 16 52 H 0.15 0.56 6.28 -2.91 -0.02 0.54 16 Total: 0.00 -36.25 431.98 1.30 -34.94 By element: Atomic # 1 Polarization: -16.53 SS G_CDS: -0.43 Total: -16.96 kcal Atomic # 6 Polarization: -1.98 SS G_CDS: 5.69 Total: 3.70 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: -4.33 Total: -4.21 kcal Atomic # 8 Polarization: -12.88 SS G_CDS: -2.52 Total: -15.40 kcal Atomic # 9 Polarization: -1.48 SS G_CDS: 0.78 Total: -0.70 kcal Atomic # 14 Polarization: -3.49 SS G_CDS: 2.11 Total: -1.38 kcal Total: -36.25 1.30 -34.94 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12622750.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.341 kcal (2) G-P(sol) polarization free energy of solvation -36.248 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.907 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.304 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.944 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.602 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds