Wall clock time and date at job start Sun Mar 7 2021 02:33:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86304 * 109.46737 * 2 1 4 4 C 1.50702 * 109.47468 * 120.00045 * 2 1 3 5 5 C 1.34832 * 125.65062 * 65.30036 * 4 2 1 6 6 C 1.40795 * 107.04954 * 180.09766 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.62775 * 6 5 4 8 8 C 1.47569 * 125.94731 * 180.25127 * 7 6 5 9 9 C 1.39922 * 119.95349 * 359.97438 * 8 7 6 10 10 C 1.36426 * 120.27871 * 179.97438 * 9 8 7 11 11 C 1.39873 * 120.18549 * 0.05125 * 10 9 8 12 12 C 1.47292 * 120.04775 * 179.97438 * 11 10 9 13 13 O 1.21620 * 120.00097 * 179.97438 * 12 11 10 14 14 N 1.34781 * 119.99896 * 359.97438 * 12 11 10 15 15 C 1.46498 * 120.00040 * 180.02562 * 14 12 11 16 16 C 1.52993 * 109.47237 * 179.97438 * 15 14 12 17 17 C 1.52999 * 109.47553 * 179.97438 * 16 15 14 18 18 H 1.08997 * 112.84940 * 316.19891 * 17 16 15 19 19 C 1.53780 * 113.61182 * 87.49767 * 17 16 15 20 20 C 1.53786 * 87.08075 * 139.98524 * 19 17 16 21 21 H 1.08997 * 113.61553 * 220.02129 * 20 19 17 22 22 F 1.39896 * 113.68937 * 89.12840 * 20 19 17 23 23 C 1.53779 * 113.61764 * 184.99656 * 17 16 15 24 24 C 1.40407 * 119.90928 * 359.96957 * 11 10 9 25 25 O 1.35679 * 120.14130 * 180.02562 * 24 11 10 26 26 C 1.38286 * 119.72477 * 359.71107 * 24 11 10 27 27 O 1.34226 * 125.65119 * 244.97145 * 4 2 1 28 28 H 0.96707 * 113.99962 * 299.99159 * 1 2 3 29 29 H 1.08999 * 109.47120 * 240.00577 * 2 1 3 30 30 H 1.48499 * 110.00338 * 300.00044 * 3 2 1 31 31 H 1.48498 * 110.00104 * 61.32409 * 3 2 1 32 32 H 1.08005 * 126.47500 * 359.96907 * 5 4 2 33 33 H 1.08002 * 126.63743 * 179.89704 * 6 5 4 34 34 H 1.07995 * 119.86089 * 0.02562 * 9 8 7 35 35 H 1.07995 * 119.90818 * 180.02562 * 10 9 8 36 36 H 0.96996 * 120.00021 * 359.97438 * 14 12 11 37 37 H 1.09009 * 109.46822 * 299.99587 * 15 14 12 38 38 H 1.08996 * 109.47310 * 59.99444 * 15 14 12 39 39 H 1.09001 * 109.47040 * 299.99832 * 16 15 14 40 40 H 1.09004 * 109.47269 * 59.99802 * 16 15 14 41 41 H 1.08995 * 113.61968 * 254.53576 * 19 17 16 42 42 H 1.09001 * 113.61476 * 25.43978 * 19 17 16 43 43 H 1.08998 * 113.61647 * 334.57288 * 23 17 16 44 44 H 1.09003 * 113.60985 * 105.38988 * 23 17 16 45 45 H 0.96701 * 113.99431 * 90.00445 * 25 24 11 46 46 H 1.07991 * 120.09730 * 180.30771 * 26 24 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.7617 -2.0192 1.5066 6 6 2.3816 -2.2631 2.7470 7 6 2.9089 -1.0787 3.1612 8 6 3.6590 -0.8546 4.4121 9 6 3.8804 -1.9181 5.2940 10 6 4.5735 -1.7186 6.4521 11 6 5.0669 -0.4481 6.7663 12 6 5.8143 -0.2359 8.0177 13 8 6.2434 0.8691 8.2899 14 7 6.0227 -1.2663 8.8611 15 6 6.7655 -1.0553 10.1060 16 6 6.8588 -2.3750 10.8743 17 6 7.6352 -2.1548 12.1741 18 1 8.5269 -1.5433 12.0361 19 6 6.7526 -1.7035 13.3498 20 6 7.5940 -2.6362 14.2370 21 1 7.0077 -3.1819 14.9763 22 9 8.7241 -2.0211 14.7863 23 6 7.8915 -3.4482 12.9654 24 6 4.8489 0.6248 5.8872 25 8 5.3259 1.8591 6.1872 26 6 4.1516 0.4169 4.7113 27 8 2.6272 -0.1464 2.2301 28 1 -0.3933 0.4416 0.7652 29 1 1.7923 -0.5137 -0.8900 30 1 1.5613 2.4680 -1.2084 31 1 1.5878 2.4586 1.2243 32 1 1.2459 -2.7432 0.8932 33 1 2.4329 -3.2083 3.2670 34 1 3.5018 -2.9013 5.0566 35 1 4.7412 -2.5438 7.1282 36 1 5.6802 -2.1475 8.6442 37 1 7.7689 -0.6977 9.8742 38 1 6.2483 -0.3154 10.7168 39 1 5.8554 -2.7322 11.1061 40 1 7.3759 -3.1152 10.2636 41 1 6.8625 -0.6480 13.5984 42 1 5.7111 -2.0114 13.2572 43 1 7.1614 -4.2330 12.7676 44 1 8.9207 -3.8019 12.9023 45 1 6.2185 2.0270 5.8553 46 1 3.9848 1.2367 4.0284 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_12807986.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:21 Heat of formation + Delta-G solvation = -88.212249 kcal Electronic energy + Delta-G solvation = -30639.119713 eV Core-core repulsion = 25991.605331 eV Total energy + Delta-G solvation = -4647.514382 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.141 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -48.66610 -43.74264 -41.56569 -39.90862 -39.22599 -38.21430 -37.88882 -36.07575 -34.27309 -33.62421 -31.80805 -31.23556 -30.34386 -27.28486 -26.80696 -25.87628 -24.28560 -24.05078 -22.88075 -22.37409 -21.96715 -21.33329 -20.42212 -19.77216 -18.84155 -18.59274 -17.70977 -17.53503 -17.38573 -17.16985 -16.83078 -16.65576 -16.52572 -16.19973 -16.08694 -15.82872 -15.82109 -15.61632 -15.21170 -14.76441 -14.53618 -14.42564 -14.26192 -13.97299 -13.80221 -13.78262 -13.62564 -13.52392 -13.43005 -13.08073 -12.96600 -12.71937 -12.51395 -12.20222 -11.97929 -11.87937 -11.79173 -11.20685 -11.13508 -11.11973 -10.84995 -10.83568 -10.63534 -10.15864 -9.95682 -9.01612 -5.00185 -0.79568 0.14386 0.64186 1.12106 1.43247 1.44756 1.69473 1.87729 1.92389 2.06098 2.64345 3.01688 3.20883 3.29583 3.35659 3.36644 3.59701 3.62764 3.65478 3.74851 3.86898 3.89171 3.99211 4.00883 4.12945 4.22767 4.27194 4.36746 4.42823 4.46292 4.61130 4.64138 4.70452 4.74205 4.75309 4.80467 4.84209 4.89907 4.94901 5.03991 5.06458 5.09659 5.14596 5.20159 5.22313 5.37552 5.43555 5.50996 5.53901 5.96042 6.30441 6.47525 6.69338 7.16516 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.032 4.032 3 Si 0.763 3.237 4 C -0.052 4.052 5 C -0.181 4.181 6 C -0.171 4.171 7 C 0.005 3.995 8 C 0.025 3.975 9 C -0.109 4.109 10 C -0.050 4.050 11 C -0.180 4.180 12 C 0.552 3.448 13 O -0.568 6.568 14 N -0.712 5.712 15 C 0.120 3.880 16 C -0.107 4.107 17 C -0.110 4.110 18 H 0.081 0.919 19 C -0.159 4.159 20 C 0.043 3.957 21 H 0.112 0.888 22 F -0.222 7.222 23 C -0.147 4.147 24 C 0.159 3.841 25 O -0.497 6.497 26 C -0.154 4.154 27 O -0.177 6.177 28 H 0.389 0.611 29 H 0.158 0.842 30 H -0.281 1.281 31 H -0.298 1.298 32 H 0.167 0.833 33 H 0.183 0.817 34 H 0.171 0.829 35 H 0.175 0.825 36 H 0.416 0.584 37 H 0.054 0.946 38 H 0.054 0.946 39 H 0.093 0.907 40 H 0.089 0.911 41 H 0.065 0.935 42 H 0.120 0.880 43 H 0.125 0.875 44 H 0.074 0.926 45 H 0.409 0.591 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.450 -9.678 -1.675 9.832 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.142 4.142 3 Si 0.667 3.333 4 C -0.102 4.102 5 C -0.200 4.200 6 C -0.190 4.190 7 C -0.045 4.045 8 C 0.025 3.975 9 C -0.127 4.127 10 C -0.068 4.068 11 C -0.183 4.183 12 C 0.340 3.660 13 O -0.448 6.448 14 N -0.365 5.365 15 C -0.004 4.004 16 C -0.144 4.144 17 C -0.129 4.129 18 H 0.099 0.901 19 C -0.196 4.196 20 C 0.007 3.993 21 H 0.130 0.870 22 F -0.203 7.203 23 C -0.184 4.184 24 C 0.112 3.888 25 O -0.310 6.310 26 C -0.172 4.172 27 O -0.075 6.075 28 H 0.239 0.761 29 H 0.176 0.824 30 H -0.207 1.207 31 H -0.225 1.225 32 H 0.185 0.815 33 H 0.201 0.799 34 H 0.189 0.811 35 H 0.192 0.808 36 H 0.255 0.745 37 H 0.072 0.928 38 H 0.072 0.928 39 H 0.112 0.888 40 H 0.108 0.892 41 H 0.084 0.916 42 H 0.138 0.862 43 H 0.143 0.857 44 H 0.093 0.907 45 H 0.269 0.731 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -0.661 -7.976 -1.700 8.182 hybrid contribution -0.573 0.156 0.381 0.706 sum -1.235 -7.820 -1.319 8.026 Atomic orbital electron populations 1.86638 1.17248 1.80355 1.50030 1.24455 0.83515 1.11897 0.94334 0.93666 0.90522 0.72205 0.76894 1.23156 1.00667 0.94219 0.92153 1.21845 1.04044 0.95679 0.98420 1.22254 1.00809 0.98921 0.96999 1.20590 1.04648 0.87958 0.91281 1.17965 0.95300 0.93939 0.90345 1.21069 0.99252 0.99405 0.92943 1.21185 0.93818 0.95052 0.96756 1.20534 1.05517 0.95447 0.96852 1.18289 0.79470 0.84331 0.83884 1.90826 1.52067 1.25504 1.76378 1.45785 1.56990 1.12378 1.21376 1.21369 0.95735 0.99065 0.84190 1.21696 1.02174 0.95537 0.95027 1.22474 0.98812 0.97782 0.93791 0.90069 1.23736 1.00502 1.00003 0.95374 1.22746 0.84481 0.95936 0.96167 0.86986 1.92774 1.54973 1.85000 1.87572 1.23610 1.04144 0.97387 0.93280 1.18519 0.94747 0.84159 0.91348 1.84730 1.37363 1.28621 1.80293 1.21569 1.01079 0.97741 0.96826 1.83937 1.57962 1.38648 1.26963 0.76068 0.82445 1.20695 1.22519 0.81501 0.79945 0.81128 0.80799 0.74518 0.92773 0.92791 0.88824 0.89199 0.91612 0.86159 0.85716 0.90707 0.73136 0.84511 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.31 12.88 -148.98 -1.92 -2.23 16 2 C -0.03 0.06 2.98 71.24 0.21 0.27 16 3 Si 0.76 -0.58 32.11 68.60 2.20 1.63 16 4 C -0.05 -0.02 6.21 24.90 0.15 0.13 16 5 C -0.18 0.18 10.78 22.11 0.24 0.42 16 6 C -0.17 0.41 10.26 22.40 0.23 0.64 16 7 C 0.00 0.00 7.02 24.24 0.17 0.17 16 8 C 0.03 0.00 5.87 -20.08 -0.12 -0.12 16 9 C -0.11 0.64 9.48 22.25 0.21 0.85 16 10 C -0.05 0.31 9.47 22.24 0.21 0.52 16 11 C -0.18 -0.34 5.89 -19.97 -0.12 -0.46 16 12 C 0.55 2.94 7.75 86.62 0.67 3.61 16 13 O -0.57 -8.37 15.14 16.90 0.26 -8.12 16 14 N -0.71 1.96 5.50 -466.50 -2.57 -0.61 16 15 C 0.12 -0.22 5.66 86.38 0.49 0.26 16 16 C -0.11 0.91 5.16 30.59 0.16 1.06 16 17 C -0.11 0.52 3.63 -10.27 -0.04 0.49 16 18 H 0.08 -0.09 8.13 -2.39 -0.02 -0.11 16 19 C -0.16 0.64 7.53 31.12 0.23 0.88 16 20 C 0.04 -0.09 5.69 31.12 0.18 0.08 16 21 H 0.11 -0.65 8.14 -2.39 -0.02 -0.67 16 22 F -0.22 -1.37 17.39 44.97 0.78 -0.59 16 23 C -0.15 0.89 7.54 31.12 0.23 1.12 16 24 C 0.16 0.82 6.71 22.81 0.15 0.98 16 25 O -0.50 -4.04 11.56 -68.97 -0.80 -4.83 16 26 C -0.15 -0.48 9.65 22.61 0.22 -0.26 16 27 O -0.18 -0.52 8.79 -6.02 -0.05 -0.57 16 28 H 0.39 -1.58 8.70 -74.05 -0.64 -2.23 16 29 H 0.16 -0.94 7.96 -2.39 -0.02 -0.96 16 30 H -0.28 -1.29 7.11 99.48 0.71 -0.58 16 31 H -0.30 -1.89 7.11 99.48 0.71 -1.18 16 32 H 0.17 -0.64 8.06 -2.91 -0.02 -0.66 16 33 H 0.18 -1.60 7.24 -2.91 -0.02 -1.62 16 34 H 0.17 -2.13 6.95 -2.91 -0.02 -2.15 16 35 H 0.17 -2.53 6.38 -2.91 -0.02 -2.55 16 36 H 0.42 -4.40 6.48 -92.71 -0.60 -5.00 16 37 H 0.05 0.09 8.14 -2.38 -0.02 0.07 16 38 H 0.05 0.10 8.14 -2.39 -0.02 0.08 16 39 H 0.09 -1.10 7.84 -2.39 -0.02 -1.12 16 40 H 0.09 -0.97 8.14 -2.38 -0.02 -0.99 16 41 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 42 H 0.12 -0.99 7.90 -2.39 -0.02 -1.01 16 43 H 0.12 -1.36 8.10 -2.39 -0.02 -1.38 16 44 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 45 H 0.41 0.35 9.06 -74.06 -0.67 -0.32 16 46 H 0.14 0.44 7.90 -2.92 -0.02 0.42 16 Total: 0.00 -27.58 394.41 0.57 -27.01 By element: Atomic # 1 Polarization: -21.53 SS G_CDS: -0.82 Total: -22.35 kcal Atomic # 6 Polarization: 7.17 SS G_CDS: 3.49 Total: 10.66 kcal Atomic # 7 Polarization: 1.96 SS G_CDS: -2.57 Total: -0.61 kcal Atomic # 8 Polarization: -13.24 SS G_CDS: -2.51 Total: -15.75 kcal Atomic # 9 Polarization: -1.37 SS G_CDS: 0.78 Total: -0.59 kcal Atomic # 14 Polarization: -0.58 SS G_CDS: 2.20 Total: 1.63 kcal Total: -27.58 0.57 -27.01 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12807986.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.203 kcal (2) G-P(sol) polarization free energy of solvation -27.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.786 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.009 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.212 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds