Wall clock time and date at job start Sun Mar 7 2021 02:33:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.39282 * 121.02892 * 2 1 4 4 C 1.46493 * 134.20505 * 359.20197 * 3 2 1 5 5 C 1.50702 * 126.59957 * 0.80690 * 4 3 2 6 6 O 1.42894 * 109.47159 * 74.70727 * 5 4 3 7 7 Si 1.86292 * 109.47221 * 194.71209 * 5 4 3 8 8 C 1.34184 * 106.80279 * 180.54481 * 4 3 2 9 9 N 1.36947 * 109.94970 * 0.26085 * 8 4 3 10 10 C 1.37150 * 110.11637 * 0.02562 * 9 8 4 11 11 N 1.32824 * 132.96525 * 179.97438 * 10 9 8 12 12 C 1.31307 * 121.89329 * 180.02562 * 11 10 9 13 13 C 1.39749 * 121.02346 * 179.66156 * 2 1 3 14 14 C 1.47656 * 120.45924 * 0.05029 * 13 2 1 15 15 O 1.21579 * 119.99813 * 354.00340 * 14 13 2 16 16 N 1.34779 * 120.00220 * 174.00352 * 14 13 2 17 17 C 1.46500 * 120.00094 * 179.97438 * 16 14 13 18 18 C 1.52998 * 109.47142 * 180.02562 * 17 16 14 19 19 C 1.53000 * 109.47054 * 180.02562 * 18 17 16 20 20 H 1.08994 * 112.84789 * 316.19228 * 19 18 17 21 21 C 1.53776 * 113.61710 * 87.50666 * 19 18 17 22 22 C 1.53775 * 87.08587 * 139.97899 * 21 19 18 23 23 H 1.08994 * 113.69547 * 220.00743 * 22 21 19 24 24 F 1.39903 * 113.61383 * 89.11273 * 22 21 19 25 25 C 1.53782 * 87.08005 * 334.56701 * 22 21 19 26 26 H 1.08998 * 109.47213 * 264.05294 * 1 2 3 27 27 H 1.09008 * 109.46822 * 24.04765 * 1 2 3 28 28 H 1.08996 * 109.47426 * 144.04890 * 1 2 3 29 29 H 1.09000 * 109.46738 * 314.70959 * 5 4 3 30 30 H 0.96702 * 113.99893 * 60.00079 * 6 5 4 31 31 H 1.48500 * 110.00046 * 179.97438 * 7 5 4 32 32 H 1.48498 * 110.00170 * 301.31643 * 7 5 4 33 33 H 1.07997 * 125.02060 * 180.24907 * 8 4 3 34 34 H 0.96999 * 124.93931 * 180.02562 * 9 8 4 35 35 H 1.07995 * 119.30918 * 179.97438 * 12 11 10 36 36 H 0.96997 * 120.00077 * 359.97438 * 16 14 13 37 37 H 1.08992 * 109.47712 * 300.00320 * 17 16 14 38 38 H 1.09001 * 109.46706 * 60.00285 * 17 16 14 39 39 H 1.09004 * 109.47536 * 300.00315 * 18 17 16 40 40 H 1.09001 * 109.47131 * 60.00492 * 18 17 16 41 41 H 1.09002 * 113.61037 * 254.52911 * 21 19 18 42 42 H 1.09000 * 113.61344 * 25.43083 * 21 19 18 43 43 H 1.08994 * 113.61473 * 270.88146 * 25 22 21 44 44 H 1.08998 * 113.61335 * 139.97961 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8517 2.6100 -0.0146 5 6 0.4529 3.1706 -0.0183 6 8 -0.1193 3.0319 1.2837 7 14 0.5076 4.9735 -0.4839 8 6 2.9950 3.3124 -0.0182 9 7 4.0670 2.4602 -0.0130 10 6 3.6348 1.1586 -0.0063 11 7 4.2720 -0.0068 0.0000 12 6 3.6266 -1.1503 0.0053 13 6 2.2273 -1.1976 0.0071 14 6 1.5224 -2.4950 0.0136 15 8 0.3120 -2.5285 0.1229 16 7 2.2207 -3.6420 -0.1015 17 6 1.5213 -4.9292 -0.0945 18 6 2.5385 -6.0631 -0.2377 19 6 1.8080 -7.4074 -0.2310 20 1 1.0355 -7.4655 0.5358 21 6 1.3326 -7.8572 -1.6225 22 6 1.7612 -9.2790 -1.2230 23 1 2.2439 -9.8333 -2.0278 24 9 0.7521 -10.0110 -0.5882 25 6 2.7518 -8.6215 -0.2476 26 1 -0.3633 -0.1065 1.0221 27 1 -0.3633 0.9386 -0.4188 28 1 -0.3634 -0.8319 -0.6033 29 1 -0.1545 2.6268 -0.7418 30 1 0.3705 3.4915 1.9795 31 1 -0.8660 5.5380 -0.4917 32 1 1.3586 5.7206 0.4767 33 1 3.0601 4.3904 -0.0246 34 1 4.9967 2.7369 -0.0139 35 1 4.1869 -2.0735 0.0099 36 1 3.1863 -3.6152 -0.1891 37 1 0.9801 -5.0436 0.8447 38 1 0.8175 -4.9648 -0.9260 39 1 3.0801 -5.9490 -1.1768 40 1 3.2420 -6.0274 0.5941 41 1 0.2581 -7.7510 -1.7722 42 1 1.9185 -7.4382 -2.4406 43 1 3.7256 -8.4114 -0.6897 44 1 2.8231 -9.1323 0.7127 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_12890568.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:26 Heat of formation + Delta-G solvation = -20.394842 kcal Electronic energy + Delta-G solvation = -28009.488145 eV Core-core repulsion = 23844.115630 eV Total energy + Delta-G solvation = -4165.372515 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.148 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -48.59190 -42.84494 -40.86644 -39.53410 -38.69218 -37.84791 -36.23752 -34.86544 -32.47603 -31.87551 -30.58438 -28.80111 -27.00246 -26.67097 -25.93169 -24.49763 -23.84911 -22.82495 -21.76016 -20.72963 -20.51129 -19.28879 -18.79003 -17.74688 -17.56179 -17.33369 -16.99278 -16.84583 -16.66320 -16.51358 -16.15378 -15.92040 -15.63651 -15.54753 -15.33148 -15.07882 -14.73674 -14.54138 -14.09789 -13.88363 -13.81000 -13.64202 -13.58855 -13.52809 -13.20255 -13.17393 -12.96744 -12.57421 -12.44627 -12.09635 -11.89468 -11.82600 -11.30409 -11.22940 -11.10228 -11.02358 -10.46653 -10.21440 -10.07596 -9.58259 -9.14193 -5.01358 -0.21876 -0.05323 1.22531 1.36687 1.49770 1.60263 1.92389 1.95720 2.12242 2.86293 3.17388 3.21952 3.27820 3.38335 3.48543 3.50678 3.58147 3.59234 3.73041 3.76285 3.79459 4.00104 4.08620 4.16302 4.25416 4.28695 4.33182 4.43637 4.48378 4.53395 4.65529 4.67457 4.71324 4.79991 4.83556 4.91932 5.00223 5.01516 5.04793 5.07986 5.20535 5.37101 5.37721 5.41930 5.58238 5.78194 6.09100 6.44269 6.48440 6.85412 7.26846 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C 0.086 3.914 3 C -0.149 4.149 4 C -0.176 4.176 5 C -0.044 4.044 6 O -0.526 6.526 7 Si 0.685 3.315 8 C 0.066 3.934 9 N -0.569 5.569 10 C 0.308 3.692 11 N -0.504 5.504 12 C 0.181 3.819 13 C -0.234 4.234 14 C 0.570 3.430 15 O -0.529 6.529 16 N -0.730 5.730 17 C 0.120 3.880 18 C -0.122 4.122 19 C -0.107 4.107 20 H 0.099 0.901 21 C -0.160 4.160 22 C 0.061 3.939 23 H 0.096 0.904 24 F -0.197 7.197 25 C -0.158 4.158 26 H 0.086 0.914 27 H 0.070 0.930 28 H 0.097 0.903 29 H 0.120 0.880 30 H 0.374 0.626 31 H -0.254 1.254 32 H -0.258 1.258 33 H 0.183 0.817 34 H 0.425 0.575 35 H 0.162 0.838 36 H 0.399 0.601 37 H 0.070 0.930 38 H 0.071 0.929 39 H 0.074 0.926 40 H 0.075 0.925 41 H 0.082 0.918 42 H 0.100 0.900 43 H 0.100 0.900 44 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.660 2.346 -2.981 6.814 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.077 3.923 3 C -0.156 4.156 4 C -0.184 4.184 5 C -0.155 4.155 6 O -0.331 6.331 7 Si 0.585 3.415 8 C -0.060 4.060 9 N -0.175 5.175 10 C 0.074 3.926 11 N -0.218 5.218 12 C 0.012 3.988 13 C -0.241 4.241 14 C 0.358 3.642 15 O -0.406 6.406 16 N -0.383 5.383 17 C -0.003 4.003 18 C -0.159 4.159 19 C -0.126 4.126 20 H 0.117 0.883 21 C -0.197 4.197 22 C 0.024 3.976 23 H 0.114 0.886 24 F -0.178 7.178 25 C -0.195 4.195 26 H 0.104 0.896 27 H 0.088 0.912 28 H 0.115 0.885 29 H 0.137 0.863 30 H 0.222 0.778 31 H -0.178 1.178 32 H -0.183 1.183 33 H 0.200 0.800 34 H 0.264 0.736 35 H 0.179 0.821 36 H 0.234 0.766 37 H 0.088 0.912 38 H 0.089 0.911 39 H 0.092 0.908 40 H 0.093 0.907 41 H 0.100 0.900 42 H 0.118 0.882 43 H 0.118 0.882 44 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 5.157 2.927 -2.969 6.631 hybrid contribution 0.353 -0.197 1.242 1.306 sum 5.510 2.730 -1.727 6.387 Atomic orbital electron populations 1.21184 0.88702 1.03753 1.04317 1.19932 0.97175 0.89158 0.86017 1.19461 0.92772 0.93526 1.09806 1.20624 0.95225 0.91042 1.11486 1.24469 0.90933 1.11704 0.88345 1.86639 1.54215 1.75806 1.16477 0.95177 0.82684 0.73600 0.89998 1.21794 0.85115 0.95954 1.03141 1.41508 1.09586 1.02713 1.63698 1.18497 0.89349 0.85880 0.98830 1.66435 1.40570 0.96013 1.18733 1.22502 0.90084 0.94428 0.91795 1.20435 0.94754 0.93779 1.15168 1.17866 0.86831 0.83263 0.76231 1.90769 1.13547 1.87069 1.49234 1.45899 1.10772 1.05891 1.75697 1.21379 0.95086 0.80985 1.02824 1.21784 0.97997 0.93065 1.03088 1.22506 0.98569 0.93358 0.98120 0.88261 1.23687 1.03296 0.94850 0.97900 1.22385 0.87563 0.91851 0.95755 0.88589 1.92830 1.62301 1.78822 1.83839 1.23618 0.98402 0.96716 1.00803 0.89558 0.91170 0.88476 0.86274 0.77839 1.17820 1.18274 0.79974 0.73603 0.82104 0.76637 0.91161 0.91087 0.90775 0.90685 0.89956 0.88157 0.88162 0.90001 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.38 8.69 36.01 0.31 -0.06 16 2 C 0.09 0.27 5.98 -103.67 -0.62 -0.35 16 3 C -0.15 -0.36 6.16 -105.13 -0.65 -1.01 16 4 C -0.18 -0.01 5.57 -102.73 -0.57 -0.58 16 5 C -0.04 0.02 2.06 36.01 0.07 0.10 16 6 O -0.53 -0.50 12.88 -35.23 -0.45 -0.96 16 7 Si 0.69 -1.49 30.83 -169.99 -5.24 -6.73 16 8 C 0.07 -0.13 10.44 -16.70 -0.17 -0.30 16 9 N -0.57 0.57 6.04 -12.12 -0.07 0.50 16 10 C 0.31 0.64 8.42 -155.71 -1.31 -0.67 16 11 N -0.50 -1.21 10.37 -11.96 -0.12 -1.34 16 12 C 0.18 0.15 10.67 -17.11 -0.18 -0.03 16 13 C -0.23 -0.52 5.89 -104.82 -0.62 -1.14 16 14 C 0.57 1.46 7.72 -12.41 -0.10 1.36 16 15 O -0.53 -3.02 13.49 5.30 0.07 -2.95 16 16 N -0.73 0.52 5.51 -61.31 -0.34 0.18 16 17 C 0.12 -0.11 5.66 -4.04 -0.02 -0.14 16 18 C -0.12 0.39 5.17 -26.73 -0.14 0.25 16 19 C -0.11 0.22 3.63 -89.81 -0.33 -0.11 16 20 H 0.10 -0.10 8.13 -51.93 -0.42 -0.52 16 21 C -0.16 0.30 7.52 -25.92 -0.20 0.11 16 22 C 0.06 -0.05 5.69 -25.92 -0.15 -0.20 16 23 H 0.10 -0.22 8.14 -51.93 -0.42 -0.65 16 24 F -0.20 -0.52 17.38 2.25 0.04 -0.48 16 25 C -0.16 0.35 7.54 -25.92 -0.20 0.15 16 26 H 0.09 0.34 8.14 -51.93 -0.42 -0.08 16 27 H 0.07 0.14 5.06 -51.92 -0.26 -0.12 16 28 H 0.10 0.40 5.95 -51.93 -0.31 0.09 16 29 H 0.12 -0.07 6.05 -51.93 -0.31 -0.39 16 30 H 0.37 -0.72 8.70 45.56 0.40 -0.32 16 31 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 32 H -0.26 0.28 7.00 56.52 0.40 0.68 16 33 H 0.18 -0.92 6.28 -52.49 -0.33 -1.25 16 34 H 0.43 -1.51 8.96 -40.82 -0.37 -1.87 16 35 H 0.16 -0.46 6.43 -52.49 -0.34 -0.80 16 36 H 0.40 -1.38 6.55 -40.82 -0.27 -1.65 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 38 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 39 H 0.07 -0.30 7.84 -51.93 -0.41 -0.70 16 40 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 41 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 42 H 0.10 -0.33 7.89 -51.93 -0.41 -0.74 16 43 H 0.10 -0.37 8.10 -51.93 -0.42 -0.79 16 44 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 LS Contribution 360.34 15.07 5.43 5.43 Total: 0.00 -9.47 360.34 -11.16 -20.63 By element: Atomic # 1 Polarization: -6.05 SS G_CDS: -5.61 Total: -11.66 kcal Atomic # 6 Polarization: 2.23 SS G_CDS: -4.86 Total: -2.63 kcal Atomic # 7 Polarization: -0.12 SS G_CDS: -0.53 Total: -0.65 kcal Atomic # 8 Polarization: -3.53 SS G_CDS: -0.38 Total: -3.91 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.04 Total: -0.48 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.24 Total: -6.73 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -9.47 -11.16 -20.63 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_12890568.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.236 kcal (2) G-P(sol) polarization free energy of solvation -9.473 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.236 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.159 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.631 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.395 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds