Wall clock time and date at job start Sun Mar 7 2021 02:33:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86300 * 109.46886 * 2 1 4 4 C 1.50690 * 109.47021 * 119.99877 * 2 1 3 5 5 C 1.38333 * 119.87334 * 65.00009 * 4 2 1 6 6 C 1.38005 * 120.12722 * 179.97438 * 5 4 2 7 7 C 1.39401 * 119.87171 * 359.97438 * 6 5 4 8 8 C 1.48279 * 120.12329 * 179.97438 * 7 6 5 9 9 C 1.39508 * 119.97432 * 180.02562 * 8 7 6 10 10 C 1.37660 * 120.02755 * 180.02562 * 9 8 7 11 11 C 1.39709 * 119.97320 * 359.97438 * 10 9 8 12 12 C 1.47722 * 120.02527 * 179.97438 * 11 10 9 13 13 O 1.21567 * 119.99989 * 0.02562 * 12 11 10 14 14 N 1.34779 * 120.00100 * 180.02562 * 12 11 10 15 15 C 1.46499 * 119.99872 * 180.02562 * 14 12 11 16 16 C 1.53000 * 109.46840 * 180.02562 * 15 14 12 17 17 C 1.53001 * 109.46886 * 180.02562 * 16 15 14 18 18 H 1.09007 * 112.84846 * 316.18745 * 17 16 15 19 19 C 1.53776 * 113.62044 * 87.50057 * 17 16 15 20 20 C 1.53778 * 87.08514 * 139.98080 * 19 17 16 21 21 H 1.08997 * 113.61324 * 220.02170 * 20 19 17 22 22 F 1.39898 * 113.68878 * 89.12638 * 20 19 17 23 23 C 1.53781 * 113.61359 * 184.99815 * 17 16 15 24 24 C 1.39711 * 119.95088 * 0.25401 * 11 10 9 25 25 C 1.37668 * 119.97627 * 359.51157 * 24 11 10 26 26 C 1.39393 * 119.74781 * 0.25809 * 7 6 5 27 27 C 1.38004 * 119.86929 * 359.50547 * 26 7 6 28 28 H 0.96697 * 113.99539 * 299.99997 * 1 2 3 29 29 H 1.09000 * 109.47108 * 240.00224 * 2 1 3 30 30 H 1.48499 * 109.99886 * 178.68033 * 3 2 1 31 31 H 1.48500 * 110.00111 * 299.99958 * 3 2 1 32 32 H 1.07995 * 119.93800 * 359.97438 * 5 4 2 33 33 H 1.08003 * 120.06328 * 179.97438 * 6 5 4 34 34 H 1.07999 * 119.98666 * 359.97438 * 9 8 7 35 35 H 1.07992 * 120.01593 * 179.97438 * 10 9 8 36 36 H 0.97000 * 119.99708 * 359.97438 * 14 12 11 37 37 H 1.09002 * 109.47391 * 59.99686 * 15 14 12 38 38 H 1.09001 * 109.46813 * 299.99742 * 15 14 12 39 39 H 1.09001 * 109.47194 * 299.99493 * 16 15 14 40 40 H 1.08992 * 109.47399 * 59.99666 * 16 15 14 41 41 H 1.08998 * 113.61532 * 254.53233 * 19 17 16 42 42 H 1.08998 * 113.61221 * 25.42993 * 19 17 16 43 43 H 1.08994 * 113.61519 * 334.56514 * 23 17 16 44 44 H 1.09005 * 113.61355 * 105.38629 * 23 17 16 45 45 H 1.08007 * 120.01073 * 179.74656 * 24 11 10 46 46 H 1.07999 * 119.98713 * 180.23579 * 25 24 11 47 47 H 1.07994 * 120.06865 * 179.74709 * 26 7 6 48 48 H 1.08003 * 119.93682 * 180.20954 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 1.6831 -2.0611 1.3958 6 6 2.1411 -2.7170 2.5203 7 6 2.8556 -2.0158 3.4903 8 6 3.3498 -2.7148 4.7010 9 6 4.0642 -2.0098 5.6701 10 6 4.5240 -2.6578 6.7943 11 6 4.2745 -4.0219 6.9648 12 6 4.7679 -4.7185 8.1704 13 8 5.3908 -4.1047 9.0149 14 7 4.5274 -6.0345 8.3341 15 6 5.0162 -6.7252 9.5300 16 6 4.6119 -8.1995 9.4685 17 6 5.1218 -8.9207 10.7178 18 1 6.1458 -8.6494 10.9748 19 6 4.1487 -8.8564 11.9067 20 6 4.5219 -10.3210 12.1902 21 1 3.6742 -10.9377 12.4889 22 9 5.6248 -10.4659 13.0386 23 6 4.8732 -10.4382 10.6977 24 6 3.5632 -4.7279 5.9914 25 6 3.1002 -4.0768 4.8702 26 6 3.0986 -0.6537 3.3207 27 6 2.6400 -0.0094 2.1897 28 1 -0.3932 0.4417 0.7651 29 1 1.7924 -0.5138 -0.8900 30 1 3.5346 1.7703 0.0321 31 1 1.5615 2.4679 -1.2085 32 1 1.1298 -2.6035 0.6435 33 1 1.9463 -3.7715 2.6486 34 1 4.2572 -0.9555 5.5379 35 1 5.0772 -2.1121 7.5441 36 1 4.0301 -6.5241 7.6604 37 1 4.5821 -6.2657 10.4180 38 1 6.1026 -6.6483 9.5754 39 1 3.5256 -8.2767 9.4229 40 1 5.0463 -8.6587 8.5806 41 1 4.4617 -8.1665 12.6903 42 1 3.1081 -8.7201 11.6123 43 1 4.0308 -10.7343 10.0727 44 1 5.7710 -11.0252 10.5039 45 1 3.3734 -5.7833 6.1202 46 1 2.5470 -4.6216 4.1195 47 1 3.6481 -0.1045 4.0708 48 1 2.8305 1.0452 2.0555 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13158362.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:30 Heat of formation + Delta-G solvation = -45.194322 kcal Electronic energy + Delta-G solvation = -28978.893838 eV Core-core repulsion = 24686.845478 eV Total energy + Delta-G solvation = -4292.048360 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.157 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -48.62002 -41.44391 -40.71647 -39.65512 -39.13039 -37.57102 -36.14169 -34.14626 -32.77882 -32.09948 -31.60146 -30.62546 -27.29379 -26.98179 -25.97673 -24.75092 -24.25432 -23.04162 -22.61430 -22.28262 -21.30310 -20.55333 -19.33826 -18.48842 -17.82870 -17.41542 -17.16866 -16.93736 -16.79203 -16.59289 -16.31965 -16.10363 -15.95027 -15.74944 -15.53549 -15.43287 -15.11016 -15.00404 -14.87807 -14.65990 -14.29531 -14.27105 -14.10407 -13.84182 -13.66306 -13.59307 -13.29762 -13.15475 -12.81375 -12.65391 -12.59469 -12.14677 -12.05655 -12.02744 -11.93396 -11.69191 -11.33872 -11.24382 -10.88920 -10.79924 -10.46983 -10.14439 -10.13450 -10.05737 -9.13542 -5.08786 -0.72888 0.26739 0.30525 0.46920 1.23280 1.58616 1.84638 1.92990 2.06310 2.57137 2.95728 3.13823 3.18428 3.32075 3.42554 3.44524 3.50395 3.53522 3.61304 3.70113 3.73834 3.76907 3.87783 3.91430 3.98629 4.13266 4.15762 4.19427 4.25948 4.28803 4.41952 4.43669 4.49789 4.54626 4.59997 4.63313 4.67301 4.76493 4.79132 4.82854 4.88235 4.95540 4.96086 5.00062 5.06495 5.11879 5.21312 5.33481 5.33820 5.34843 5.40469 5.56891 5.72785 5.82636 6.41273 6.50201 7.17409 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.069 4.069 3 Si 0.685 3.315 4 C -0.114 4.114 5 C -0.090 4.090 6 C -0.105 4.105 7 C -0.049 4.049 8 C -0.018 4.018 9 C -0.118 4.118 10 C -0.054 4.054 11 C -0.136 4.136 12 C 0.558 3.442 13 O -0.533 6.533 14 N -0.728 5.728 15 C 0.119 3.881 16 C -0.121 4.121 17 C -0.107 4.107 18 H 0.099 0.901 19 C -0.160 4.160 20 C 0.061 3.939 21 H 0.097 0.903 22 F -0.197 7.197 23 C -0.157 4.157 24 C -0.082 4.082 25 C -0.118 4.118 26 C -0.100 4.100 27 C -0.113 4.113 28 H 0.379 0.621 29 H 0.114 0.886 30 H -0.257 1.257 31 H -0.254 1.254 32 H 0.129 0.871 33 H 0.129 0.871 34 H 0.135 0.865 35 H 0.140 0.860 36 H 0.400 0.600 37 H 0.071 0.929 38 H 0.070 0.930 39 H 0.073 0.927 40 H 0.074 0.926 41 H 0.082 0.918 42 H 0.100 0.900 43 H 0.100 0.900 44 H 0.082 0.918 45 H 0.128 0.872 46 H 0.133 0.867 47 H 0.132 0.868 48 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.748 -1.405 -1.397 4.240 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.180 4.180 3 Si 0.587 3.413 4 C -0.114 4.114 5 C -0.108 4.108 6 C -0.123 4.123 7 C -0.049 4.049 8 C -0.018 4.018 9 C -0.136 4.136 10 C -0.073 4.073 11 C -0.139 4.139 12 C 0.345 3.655 13 O -0.411 6.411 14 N -0.381 5.381 15 C -0.005 4.005 16 C -0.159 4.159 17 C -0.126 4.126 18 H 0.118 0.882 19 C -0.198 4.198 20 C 0.025 3.975 21 H 0.114 0.886 22 F -0.178 7.178 23 C -0.195 4.195 24 C -0.101 4.101 25 C -0.136 4.136 26 C -0.118 4.118 27 C -0.131 4.131 28 H 0.227 0.773 29 H 0.131 0.869 30 H -0.182 1.182 31 H -0.179 1.179 32 H 0.147 0.853 33 H 0.147 0.853 34 H 0.153 0.847 35 H 0.158 0.842 36 H 0.235 0.765 37 H 0.090 0.910 38 H 0.089 0.911 39 H 0.092 0.908 40 H 0.093 0.907 41 H 0.101 0.899 42 H 0.118 0.882 43 H 0.118 0.882 44 H 0.100 0.900 45 H 0.146 0.854 46 H 0.151 0.849 47 H 0.150 0.850 48 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -2.683 -0.697 -1.724 3.264 hybrid contribution -0.053 -0.981 -0.443 1.078 sum -2.736 -1.678 -2.167 3.873 Atomic orbital electron populations 1.86516 1.16974 1.81701 1.49266 1.25075 0.85331 1.10163 0.97464 0.94760 0.81140 0.78009 0.87355 1.20454 0.99169 0.95050 0.96764 1.20974 0.98598 0.93734 0.97538 1.21315 0.97324 1.00116 0.93508 1.18816 0.98774 0.93489 0.93824 1.18992 0.96238 0.93321 0.93240 1.21250 0.98316 1.00509 0.93478 1.21233 0.96179 0.92946 0.96921 1.19980 1.03103 0.95112 0.95728 1.18274 0.79456 0.81737 0.86007 1.90808 1.40240 1.66080 1.43932 1.45923 1.58255 1.09540 1.24364 1.21408 0.99968 0.91527 0.87564 1.21777 1.01676 0.93856 0.98565 1.22513 1.00342 0.95114 0.94639 0.88238 1.23688 1.00826 0.96164 0.99077 1.22375 0.86762 0.98890 0.89482 0.88562 1.92830 1.55903 1.96689 1.72334 1.23614 1.03570 0.96821 0.95511 1.21195 0.96124 0.99543 0.93228 1.21159 1.00652 0.93750 0.98055 1.21229 0.99366 0.93606 0.97607 1.20945 0.98651 0.99360 0.94101 0.77320 0.86859 1.18194 1.17881 0.85308 0.85301 0.84721 0.84207 0.76473 0.91046 0.91121 0.90798 0.90706 0.89935 0.88159 0.88177 0.89968 0.85436 0.84914 0.85000 0.85254 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.11 12.83 -35.23 -0.45 -0.34 16 2 C -0.07 0.05 2.80 36.00 0.10 0.15 16 3 Si 0.69 -0.95 29.79 -169.99 -5.06 -6.02 16 4 C -0.11 0.05 5.36 -104.56 -0.56 -0.51 16 5 C -0.09 0.02 9.67 -39.63 -0.38 -0.36 16 6 C -0.10 0.06 9.43 -39.23 -0.37 -0.31 16 7 C -0.05 0.01 5.88 -104.90 -0.62 -0.61 16 8 C -0.02 0.00 5.88 -104.82 -0.62 -0.61 16 9 C -0.12 0.02 9.41 -39.32 -0.37 -0.35 16 10 C -0.05 -0.06 9.58 -39.24 -0.38 -0.43 16 11 C -0.14 -0.14 5.88 -104.92 -0.62 -0.75 16 12 C 0.56 1.38 7.77 -12.38 -0.10 1.28 16 13 O -0.53 -3.41 16.33 5.31 0.09 -3.32 16 14 N -0.73 0.50 5.51 -61.29 -0.34 0.17 16 15 C 0.12 -0.10 5.66 -4.04 -0.02 -0.12 16 16 C -0.12 0.39 5.17 -26.73 -0.14 0.25 16 17 C -0.11 0.23 3.63 -89.81 -0.33 -0.10 16 18 H 0.10 -0.11 8.13 -51.93 -0.42 -0.53 16 19 C -0.16 0.32 7.53 -25.92 -0.20 0.12 16 20 C 0.06 -0.06 5.69 -25.92 -0.15 -0.21 16 21 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 22 F -0.20 -0.49 17.39 2.25 0.04 -0.45 16 23 C -0.16 0.37 7.54 -25.92 -0.20 0.17 16 24 C -0.08 0.10 9.52 -39.24 -0.37 -0.27 16 25 C -0.12 0.13 9.41 -39.32 -0.37 -0.24 16 26 C -0.10 0.09 9.43 -39.24 -0.37 -0.28 16 27 C -0.11 0.13 8.65 -39.63 -0.34 -0.22 16 28 H 0.38 -1.52 8.70 45.56 0.40 -1.12 16 29 H 0.11 -0.03 7.96 -51.93 -0.41 -0.44 16 30 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 31 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 32 H 0.13 -0.11 8.06 -52.49 -0.42 -0.54 16 33 H 0.13 -0.31 6.19 -52.48 -0.33 -0.64 16 34 H 0.14 -0.29 6.19 -52.49 -0.32 -0.61 16 35 H 0.14 0.17 7.64 -52.49 -0.40 -0.23 16 36 H 0.40 -1.41 6.49 -40.82 -0.26 -1.67 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 38 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 39 H 0.07 -0.30 7.84 -51.93 -0.41 -0.71 16 40 H 0.07 -0.27 8.14 -51.93 -0.42 -0.70 16 41 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 42 H 0.10 -0.34 7.89 -51.93 -0.41 -0.75 16 43 H 0.10 -0.39 8.10 -51.93 -0.42 -0.81 16 44 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 45 H 0.13 -0.53 6.39 -52.48 -0.34 -0.86 16 46 H 0.13 -0.41 6.19 -52.49 -0.32 -0.74 16 47 H 0.13 -0.36 6.19 -52.49 -0.33 -0.68 16 48 H 0.13 -0.39 4.89 -52.48 -0.26 -0.65 16 LS Contribution 395.61 15.07 5.96 5.96 Total: 0.00 -9.03 395.61 -12.54 -21.57 By element: Atomic # 1 Polarization: -7.78 SS G_CDS: -6.39 Total: -14.17 kcal Atomic # 6 Polarization: 2.99 SS G_CDS: -6.38 Total: -3.40 kcal Atomic # 7 Polarization: 0.50 SS G_CDS: -0.34 Total: 0.17 kcal Atomic # 8 Polarization: -3.30 SS G_CDS: -0.37 Total: -3.67 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.06 Total: -6.02 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -9.03 -12.54 -21.57 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13158362.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.621 kcal (2) G-P(sol) polarization free energy of solvation -9.032 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.653 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.542 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.573 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.194 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds