Wall clock time and date at job start Sun Mar 7 2021 02:33:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.47374 * 2 1 4 4 C 1.50701 * 109.47245 * 239.99623 * 2 1 3 5 5 C 1.38899 * 119.67317 * 119.98364 * 4 2 1 6 6 C 1.36469 * 120.61598 * 180.02562 * 5 4 2 7 7 C 1.40067 * 119.82656 * 359.97438 * 6 5 4 8 8 C 1.41597 * 133.37966 * 180.32290 * 7 6 5 9 9 C 1.35862 * 107.72694 * 180.13435 * 8 7 6 10 10 C 1.47067 * 125.42439 * 179.84512 * 9 8 7 11 11 O 1.21643 * 119.99799 * 359.69523 * 10 9 8 12 12 N 1.34775 * 119.99826 * 179.69516 * 10 9 8 13 13 C 1.46502 * 119.99982 * 179.97438 * 12 10 9 14 14 C 1.53003 * 109.47117 * 180.02562 * 13 12 10 15 15 C 1.52994 * 109.46905 * 180.02562 * 14 13 12 16 16 H 1.09002 * 112.90771 * 316.25047 * 15 14 13 17 17 C 1.53779 * 113.61529 * 87.50451 * 15 14 13 18 18 C 1.53779 * 87.08402 * 139.98073 * 17 15 14 19 19 H 1.08997 * 113.61646 * 220.02209 * 18 17 15 20 20 F 1.39901 * 113.61703 * 89.11572 * 18 17 15 21 21 C 1.53784 * 113.61233 * 185.00038 * 15 14 13 22 22 N 1.38150 * 109.15026 * 359.58160 * 9 8 7 23 23 C 1.37495 * 108.78412 * 0.26538 * 22 9 8 24 24 C 1.37707 * 119.67765 * 300.00132 * 4 2 1 25 25 H 0.96694 * 114.00253 * 300.00533 * 1 2 3 26 26 H 1.09003 * 109.46651 * 119.99874 * 2 1 3 27 27 H 1.48501 * 110.00302 * 178.67627 * 3 2 1 28 28 H 1.48498 * 110.00289 * 299.99852 * 3 2 1 29 29 H 1.08001 * 119.69360 * 0.02562 * 5 4 2 30 30 H 1.07999 * 120.08755 * 179.97438 * 6 5 4 31 31 H 1.08005 * 126.13882 * 359.97438 * 8 7 6 32 32 H 0.97004 * 119.99989 * 0.02562 * 12 10 9 33 33 H 1.09000 * 109.46536 * 60.00477 * 13 12 10 34 34 H 1.08994 * 109.47226 * 300.00603 * 13 12 10 35 35 H 1.08994 * 109.46694 * 60.00154 * 14 13 12 36 36 H 1.09001 * 109.46897 * 300.00518 * 14 13 12 37 37 H 1.09006 * 113.61307 * 25.43275 * 17 15 14 38 38 H 1.08999 * 113.69146 * 254.53761 * 17 15 14 39 39 H 1.09004 * 113.61451 * 105.47254 * 21 15 14 40 40 H 1.08994 * 113.61477 * 334.56556 * 21 15 14 41 41 H 0.96993 * 125.60823 * 180.23512 * 22 9 8 42 42 H 1.08001 * 120.09506 * 359.97438 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7292 -0.0289 -2.1404 6 6 3.1942 -0.6533 -3.2613 7 6 2.8660 -1.9941 -3.4986 8 6 3.1854 -2.9048 -4.5349 9 6 2.5832 -4.0879 -4.2460 10 6 2.6563 -5.3048 -5.0685 11 8 3.2922 -5.3007 -6.1055 12 7 2.0188 -6.4246 -4.6733 13 6 2.0911 -7.6367 -5.4930 14 6 1.2867 -8.7533 -4.8243 15 6 1.3627 -10.0193 -5.6800 16 1 1.2342 -9.8206 -6.7440 17 6 2.5780 -10.9061 -5.3614 18 6 1.6412 -12.1141 -5.5282 19 1 1.8118 -12.9033 -4.7960 20 9 1.5739 -12.5942 -6.8405 21 6 0.4857 -11.1694 -5.1577 22 7 1.8962 -3.9675 -3.0535 23 6 2.0571 -2.6878 -2.5771 24 6 1.5946 -2.0289 -1.4417 25 1 -0.3933 0.4417 0.7649 26 1 1.7923 -0.5138 0.8900 27 1 3.5347 1.7702 0.0322 28 1 1.5616 2.4679 -1.2085 29 1 2.9840 1.0049 -1.9594 30 1 3.8136 -0.1151 -3.9634 31 1 3.7958 -2.6956 -5.4010 32 1 1.5114 -6.4277 -3.8466 33 1 3.1313 -7.9469 -5.5917 34 1 1.6775 -7.4327 -6.4806 35 1 0.2465 -8.4428 -4.7259 36 1 1.7000 -8.9573 -3.8366 37 1 2.9545 -10.7824 -4.3459 38 1 3.3653 -10.8570 -6.1137 39 1 -0.4172 -11.3322 -5.7464 40 1 0.2902 -11.1178 -4.0867 41 1 1.3842 -4.6700 -2.6232 42 1 0.9738 -2.5503 -0.7281 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13158378.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:34 Heat of formation + Delta-G solvation = -34.444123 kcal Electronic energy + Delta-G solvation = -25160.695794 eV Core-core repulsion = 21215.677587 eV Total energy + Delta-G solvation = -3945.018207 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.137 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -48.65265 -42.70404 -40.63448 -39.55109 -38.84828 -37.02763 -36.27407 -33.36999 -32.32430 -30.97433 -30.45439 -27.39498 -27.00634 -25.85569 -24.20161 -23.16661 -22.91299 -21.94248 -21.20100 -20.59670 -19.62666 -18.45531 -18.00477 -17.40986 -17.38376 -17.03239 -16.89937 -16.55617 -16.35038 -16.10493 -15.73039 -15.56604 -15.14551 -15.03856 -14.82590 -14.66708 -14.52970 -14.33500 -14.02593 -13.87898 -13.71209 -13.35698 -13.28172 -12.77632 -12.66933 -12.27239 -12.21087 -12.15681 -11.99498 -11.85134 -11.42783 -11.36408 -11.09836 -10.95091 -10.36960 -10.31114 -9.34152 -8.83738 -4.96818 -0.35495 0.48003 0.98589 1.26374 1.64848 1.73588 1.89944 1.99127 2.24990 2.72040 3.09295 3.13506 3.34589 3.39406 3.46517 3.53322 3.59548 3.66856 3.82953 3.89818 3.94510 4.04778 4.17471 4.21475 4.28254 4.34930 4.36880 4.42559 4.45299 4.54174 4.58326 4.62012 4.72606 4.83456 4.86773 4.88687 4.93166 4.94414 5.12746 5.29381 5.30499 5.35659 5.50061 5.58435 5.92589 6.15701 6.31553 6.57392 6.96549 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.071 4.071 3 Si 0.685 3.315 4 C -0.045 4.045 5 C -0.152 4.152 6 C -0.049 4.049 7 C -0.117 4.117 8 C -0.099 4.099 9 C 0.013 3.987 10 C 0.585 3.415 11 O -0.516 6.516 12 N -0.730 5.730 13 C 0.119 3.881 14 C -0.121 4.121 15 C -0.107 4.107 16 H 0.100 0.900 17 C -0.160 4.160 18 C 0.061 3.939 19 H 0.097 0.903 20 F -0.196 7.196 21 C -0.157 4.157 22 N -0.578 5.578 23 C 0.117 3.883 24 C -0.100 4.100 25 H 0.383 0.617 26 H 0.075 0.925 27 H -0.254 1.254 28 H -0.250 1.250 29 H 0.121 0.879 30 H 0.132 0.868 31 H 0.159 0.841 32 H 0.396 0.604 33 H 0.074 0.926 34 H 0.073 0.927 35 H 0.074 0.926 36 H 0.073 0.927 37 H 0.100 0.900 38 H 0.082 0.918 39 H 0.082 0.918 40 H 0.100 0.900 41 H 0.417 0.583 42 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.519 -0.178 7.701 8.104 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.182 4.182 3 Si 0.586 3.414 4 C -0.046 4.046 5 C -0.170 4.170 6 C -0.067 4.067 7 C -0.122 4.122 8 C -0.125 4.125 9 C -0.096 4.096 10 C 0.371 3.629 11 O -0.391 6.391 12 N -0.382 5.382 13 C -0.004 4.004 14 C -0.159 4.159 15 C -0.126 4.126 16 H 0.118 0.882 17 C -0.198 4.198 18 C 0.025 3.975 19 H 0.115 0.885 20 F -0.177 7.177 21 C -0.195 4.195 22 N -0.183 5.183 23 C 0.007 3.993 24 C -0.120 4.120 25 H 0.230 0.770 26 H 0.093 0.907 27 H -0.179 1.179 28 H -0.174 1.174 29 H 0.138 0.862 30 H 0.150 0.850 31 H 0.177 0.823 32 H 0.230 0.770 33 H 0.092 0.908 34 H 0.092 0.908 35 H 0.093 0.907 36 H 0.092 0.908 37 H 0.118 0.882 38 H 0.101 0.899 39 H 0.101 0.899 40 H 0.118 0.882 41 H 0.255 0.745 42 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -1.535 -0.098 5.906 6.102 hybrid contribution -0.504 -0.995 0.396 1.184 sum -2.039 -1.093 6.302 6.713 Atomic orbital electron populations 1.86492 1.17187 1.81811 1.49743 1.24699 0.85714 1.10530 0.97244 0.95426 0.80709 0.77834 0.87448 1.19025 0.97378 0.93079 0.95158 1.20342 1.01722 0.99259 0.95703 1.20324 0.97763 0.92222 0.96409 1.18198 1.02780 0.94748 0.96468 1.20976 1.01520 0.90359 0.99692 1.20092 1.03306 0.96615 0.89570 1.17171 0.79419 0.81584 0.84747 1.90890 1.41325 1.83539 1.23309 1.45895 1.53600 1.11888 1.26791 1.21458 1.01494 0.82813 0.94655 1.21781 1.00827 0.93972 0.99312 1.22510 0.96377 0.92988 1.00711 0.88158 1.23695 0.97489 0.94826 1.03790 1.22372 0.98646 0.96080 0.80391 0.88524 1.92833 1.97001 1.89594 1.38286 1.23617 0.97923 0.95117 1.02859 1.41866 1.45516 1.11035 1.19846 1.18281 0.99981 0.84629 0.96423 1.19820 1.02093 0.94108 0.96012 0.76975 0.90672 1.17895 1.17429 0.86198 0.84999 0.82320 0.77037 0.90762 0.90819 0.90693 0.90806 0.88193 0.89884 0.89922 0.88186 0.74468 0.85331 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.17 12.73 -35.23 -0.45 -0.28 16 2 C -0.07 0.03 2.80 36.01 0.10 0.13 16 3 Si 0.68 -0.86 29.75 -169.99 -5.06 -5.91 16 4 C -0.04 -0.10 5.43 -104.57 -0.57 -0.66 16 5 C -0.15 -0.38 8.59 -39.97 -0.34 -0.73 16 6 C -0.05 -0.12 10.06 -39.53 -0.40 -0.51 16 7 C -0.12 -0.36 6.16 -106.93 -0.66 -1.02 16 8 C -0.10 -0.29 10.53 -39.15 -0.41 -0.70 16 9 C 0.01 0.03 6.97 -82.29 -0.57 -0.55 16 10 C 0.58 1.41 7.80 -12.68 -0.10 1.31 16 11 O -0.52 -3.21 16.84 5.24 0.09 -3.13 16 12 N -0.73 0.81 5.55 -61.50 -0.34 0.47 16 13 C 0.12 -0.15 5.67 -4.04 -0.02 -0.17 16 14 C -0.12 0.43 5.17 -26.73 -0.14 0.29 16 15 C -0.11 0.26 3.63 -89.81 -0.33 -0.07 16 16 H 0.10 -0.14 8.13 -51.93 -0.42 -0.56 16 17 C -0.16 0.35 7.53 -25.92 -0.20 0.15 16 18 C 0.06 -0.07 5.69 -25.92 -0.15 -0.22 16 19 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 20 F -0.20 -0.47 17.38 2.25 0.04 -0.43 16 21 C -0.16 0.39 7.54 -25.91 -0.20 0.20 16 22 N -0.58 0.04 6.07 -7.35 -0.04 0.00 16 23 C 0.12 0.25 7.25 -83.97 -0.61 -0.36 16 24 C -0.10 -0.17 9.61 -39.43 -0.38 -0.55 16 25 H 0.38 -2.04 8.74 45.56 0.40 -1.64 16 26 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 27 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 28 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 29 H 0.12 0.21 4.82 -52.49 -0.25 -0.04 16 30 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 31 H 0.16 0.34 8.06 -52.48 -0.42 -0.08 16 32 H 0.40 -1.60 7.53 -40.82 -0.31 -1.91 16 33 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 36 H 0.07 -0.33 7.84 -51.93 -0.41 -0.73 16 37 H 0.10 -0.35 7.90 -51.93 -0.41 -0.76 16 38 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 39 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16 41 H 0.42 -1.46 8.12 -40.82 -0.33 -1.79 16 42 H 0.13 0.01 8.06 -52.49 -0.42 -0.42 16 LS Contribution 355.11 15.07 5.35 5.35 Total: 0.00 -9.54 355.11 -10.95 -20.48 By element: Atomic # 1 Polarization: -7.53 SS G_CDS: -5.57 Total: -13.10 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -4.96 Total: -3.45 kcal Atomic # 7 Polarization: 0.86 SS G_CDS: -0.39 Total: 0.47 kcal Atomic # 8 Polarization: -3.05 SS G_CDS: -0.36 Total: -3.41 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.04 Total: -0.43 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.06 Total: -5.91 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -9.54 -10.95 -20.48 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13158378.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.961 kcal (2) G-P(sol) polarization free energy of solvation -9.537 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.498 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.946 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.483 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.444 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds