Wall clock time and date at job start Sun Mar 7 2021 02:33:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50699 * 109.47152 * 239.99653 * 2 1 3 5 5 C 1.34711 * 125.66298 * 299.71853 * 4 2 1 6 6 C 1.40971 * 107.02455 * 179.85499 * 5 4 2 7 7 C 1.35936 * 106.74468 * 0.40910 * 6 5 4 8 8 C 1.47815 * 125.93282 * 179.75348 * 7 6 5 9 9 C 1.39802 * 119.99725 * 0.02562 * 8 7 6 10 10 C 1.37817 * 120.24147 * 180.02562 * 9 8 7 11 11 C 1.38774 * 120.24719 * 0.02562 * 10 9 8 12 12 O 1.35639 * 120.00328 * 179.97438 * 11 10 9 13 13 C 1.40247 * 119.99300 * 359.97438 * 11 10 9 14 14 C 1.47565 * 120.12007 * 180.02562 * 13 11 10 15 15 O 1.21581 * 120.00146 * 359.97438 * 14 13 11 16 16 N 1.34775 * 119.99898 * 179.97438 * 14 13 11 17 17 C 1.46504 * 120.00056 * 179.97438 * 16 14 13 18 18 C 1.53004 * 109.47212 * 180.02562 * 17 16 14 19 19 C 1.53005 * 109.46739 * 180.02562 * 18 17 16 20 20 H 1.08996 * 112.85080 * 314.66282 * 19 18 17 21 21 C 1.53773 * 113.61491 * 85.86308 * 19 18 17 22 22 C 1.53957 * 87.01941 * 139.94790 * 21 19 18 23 23 H 1.09003 * 113.66567 * 220.06793 * 22 21 19 24 24 F 1.39904 * 113.61247 * 89.19956 * 22 21 19 25 25 C 1.53779 * 87.11244 * 334.63483 * 22 21 19 26 26 C 1.39218 * 120.00024 * 179.74986 * 8 7 6 27 27 O 1.34334 * 125.66370 * 120.03282 * 4 2 1 28 28 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 29 29 H 1.09008 * 109.46477 * 119.99697 * 2 1 3 30 30 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 31 31 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 32 32 H 1.08001 * 126.48496 * 359.97438 * 5 4 2 33 33 H 1.08002 * 126.62319 * 180.12053 * 6 5 4 34 34 H 1.07999 * 119.88317 * 359.97438 * 9 8 7 35 35 H 1.08002 * 119.87652 * 180.02562 * 10 9 8 36 36 H 0.96702 * 114.00354 * 90.00029 * 12 11 10 37 37 H 0.97006 * 120.00423 * 359.97438 * 16 14 13 38 38 H 1.08999 * 109.47116 * 300.00031 * 17 16 14 39 39 H 1.09002 * 109.46831 * 59.99970 * 17 16 14 40 40 H 1.08999 * 109.47030 * 299.99991 * 18 17 16 41 41 H 1.08993 * 109.46845 * 59.99852 * 18 17 16 42 42 H 1.09003 * 113.61559 * 254.52373 * 21 19 18 43 43 H 1.09006 * 113.61689 * 25.43102 * 21 19 18 44 44 H 1.08993 * 113.61618 * 270.81546 * 25 22 21 45 45 H 1.09001 * 113.61729 * 139.90684 * 25 22 21 46 46 H 1.07996 * 120.11918 * 359.97438 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.6816 -1.9943 -1.5530 6 6 2.3347 -2.2470 -2.7765 7 6 2.9607 -1.0939 -3.1317 8 6 3.7776 -0.8891 -4.3465 9 6 3.9597 -1.9390 -5.2516 10 6 4.7207 -1.7537 -6.3855 11 6 5.3124 -0.5239 -6.6371 12 8 6.0609 -0.3472 -7.7544 13 6 5.1364 0.5362 -5.7360 14 6 5.7638 1.8453 -6.0010 15 8 6.4352 2.0062 -7.0018 16 7 5.5927 2.8626 -5.1337 17 6 6.2160 4.1621 -5.3965 18 6 5.8677 5.1328 -4.2663 19 6 6.5182 6.4901 -4.5412 20 1 7.5577 6.4049 -4.8578 21 6 5.6733 7.4071 -5.4411 22 6 6.1013 8.5672 -4.5238 23 1 5.3012 9.2772 -4.3141 24 9 7.2887 9.1894 -4.9242 25 6 6.2986 7.5172 -3.4178 26 6 4.3609 0.3509 -4.5922 27 8 2.7074 -0.1704 -2.1847 28 1 -0.3934 0.4418 0.7650 29 1 1.7923 -0.5138 0.8901 30 1 1.5616 2.4678 -1.2086 31 1 1.5878 2.4586 1.2241 32 1 1.0911 -2.6965 -0.9831 33 1 2.3406 -3.1784 -3.3233 34 1 3.5030 -2.8989 -5.0611 35 1 4.8572 -2.5687 -7.0810 36 1 5.5574 -0.0397 -8.5206 37 1 5.0567 2.7344 -4.3353 38 1 7.2980 4.0417 -5.4509 39 1 5.8464 4.5576 -6.3425 40 1 4.7857 5.2532 -4.2114 41 1 6.2376 4.7370 -3.3205 42 1 6.0539 7.4910 -6.4590 43 1 4.6053 7.1922 -5.4037 44 1 5.4020 7.3322 -2.8263 45 1 7.1832 7.6896 -2.8048 46 1 4.2175 1.1646 -3.8968 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13259648.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:43 Heat of formation + Delta-G solvation = -86.598907 kcal Electronic energy + Delta-G solvation = -31406.246853 eV Core-core repulsion = 26758.802431 eV Total energy + Delta-G solvation = -4647.444422 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.141 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -48.60340 -43.70408 -41.49112 -39.91002 -39.25005 -38.21094 -37.83386 -35.98318 -34.24281 -33.09180 -32.73490 -31.31391 -30.14594 -27.02459 -26.43893 -26.38391 -24.86708 -23.56048 -23.01510 -22.70047 -21.67757 -21.15313 -20.52923 -19.65538 -18.98477 -18.87289 -17.83846 -17.38226 -17.22899 -17.09788 -16.86416 -16.72587 -16.45520 -16.27587 -16.11504 -15.89569 -15.86993 -15.42676 -15.30988 -14.71888 -14.49114 -14.44233 -14.30978 -14.11495 -13.97997 -13.80690 -13.67448 -13.52801 -13.24927 -13.12959 -13.10262 -12.83412 -12.61137 -12.13170 -12.12096 -11.91746 -11.82164 -11.31806 -11.18766 -11.06410 -10.81581 -10.72823 -10.42596 -10.32073 -10.04383 -8.90094 -5.10805 -0.56287 -0.22395 0.74049 1.03766 1.31613 1.47547 1.64012 1.83332 1.96162 2.06820 2.64046 3.06500 3.13365 3.15526 3.20487 3.37544 3.46464 3.49082 3.57673 3.58156 3.74884 3.77904 3.94021 3.97141 4.03452 4.09720 4.16536 4.20078 4.31656 4.36698 4.46726 4.51784 4.58616 4.61644 4.65853 4.69601 4.76443 4.80343 4.82918 4.90239 4.98738 5.00365 5.02845 5.11236 5.15418 5.35970 5.37793 5.40844 5.44544 5.99602 6.20219 6.43703 6.67194 7.21900 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.037 4.037 3 Si 0.695 3.305 4 C -0.004 4.004 5 C -0.168 4.168 6 C -0.187 4.187 7 C 0.035 3.965 8 C -0.033 4.033 9 C -0.053 4.053 10 C -0.148 4.148 11 C 0.179 3.821 12 O -0.475 6.475 13 C -0.164 4.164 14 C 0.559 3.441 15 O -0.516 6.516 16 N -0.730 5.730 17 C 0.120 3.880 18 C -0.122 4.122 19 C -0.106 4.106 20 H 0.100 0.900 21 C -0.160 4.160 22 C 0.061 3.939 23 H 0.096 0.904 24 F -0.197 7.197 25 C -0.157 4.157 26 C -0.054 4.054 27 O -0.165 6.165 28 H 0.388 0.612 29 H 0.097 0.903 30 H -0.251 1.251 31 H -0.252 1.252 32 H 0.154 0.846 33 H 0.155 0.845 34 H 0.140 0.860 35 H 0.146 0.854 36 H 0.399 0.601 37 H 0.399 0.601 38 H 0.071 0.929 39 H 0.070 0.930 40 H 0.073 0.927 41 H 0.076 0.924 42 H 0.082 0.918 43 H 0.099 0.901 44 H 0.100 0.900 45 H 0.082 0.918 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.282 -1.195 4.769 5.911 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.146 4.146 3 Si 0.594 3.406 4 C -0.054 4.054 5 C -0.187 4.187 6 C -0.206 4.206 7 C -0.014 4.014 8 C -0.033 4.033 9 C -0.071 4.071 10 C -0.167 4.167 11 C 0.132 3.868 12 O -0.287 6.287 13 C -0.168 4.168 14 C 0.346 3.654 15 O -0.392 6.392 16 N -0.383 5.383 17 C -0.003 4.003 18 C -0.160 4.160 19 C -0.125 4.125 20 H 0.118 0.882 21 C -0.198 4.198 22 C 0.025 3.975 23 H 0.114 0.886 24 F -0.178 7.178 25 C -0.195 4.195 26 C -0.073 4.073 27 O -0.063 6.063 28 H 0.238 0.762 29 H 0.115 0.885 30 H -0.174 1.174 31 H -0.176 1.176 32 H 0.171 0.829 33 H 0.173 0.827 34 H 0.158 0.842 35 H 0.164 0.836 36 H 0.258 0.742 37 H 0.234 0.766 38 H 0.089 0.911 39 H 0.089 0.911 40 H 0.092 0.908 41 H 0.094 0.906 42 H 0.101 0.899 43 H 0.118 0.882 44 H 0.118 0.882 45 H 0.101 0.899 46 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -2.308 -0.379 3.810 4.471 hybrid contribution -1.795 -0.311 0.669 1.941 sum -4.103 -0.689 4.479 6.114 Atomic orbital electron populations 1.86561 1.16859 1.80387 1.50324 1.23772 0.84907 1.12131 0.93838 0.94607 0.91389 0.73565 0.81060 1.21231 0.98791 0.93092 0.92242 1.21524 1.03288 0.96049 0.97826 1.21851 1.01660 0.98920 0.98151 1.20234 1.02548 0.88187 0.90455 1.17563 0.99160 0.94608 0.91960 1.21125 0.95895 0.98204 0.91893 1.21397 0.98353 0.97749 0.99174 1.18595 0.88815 0.91031 0.88330 1.84748 1.35658 1.88686 1.19610 1.20287 1.03387 0.94792 0.98285 1.17974 0.80705 0.83423 0.83302 1.90841 1.38611 1.82888 1.26895 1.45942 1.54193 1.11973 1.26232 1.21386 0.98499 0.81580 0.98824 1.21788 1.01298 0.94302 0.98601 1.22504 1.00504 0.92883 0.96626 0.88225 1.23717 1.01379 0.95062 0.99622 1.22418 0.84285 0.93839 0.96988 0.88611 1.92830 1.49181 1.84087 1.91670 1.23609 1.03926 0.95163 0.96787 1.21297 0.93920 0.96681 0.95397 1.83880 1.55395 1.39142 1.27866 0.76235 0.88538 1.17437 1.17604 0.82854 0.82714 0.84190 0.83635 0.74161 0.76561 0.91075 0.91124 0.90850 0.90566 0.89940 0.88222 0.88184 0.89932 0.84669 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.11 12.85 -35.23 -0.45 -0.34 16 2 C -0.04 0.04 2.97 36.01 0.11 0.15 16 3 Si 0.69 -1.32 32.10 -169.99 -5.46 -6.78 16 4 C 0.00 0.00 6.25 -35.56 -0.22 -0.23 16 5 C -0.17 -0.17 10.77 -39.80 -0.43 -0.59 16 6 C -0.19 -0.08 10.26 -39.37 -0.40 -0.48 16 7 C 0.04 0.03 7.03 -36.49 -0.26 -0.22 16 8 C -0.03 -0.01 5.87 -105.03 -0.62 -0.62 16 9 C -0.05 0.06 9.54 -39.15 -0.37 -0.32 16 10 C -0.15 0.09 9.96 -39.54 -0.39 -0.30 16 11 C 0.18 0.26 6.72 -38.63 -0.26 0.00 16 12 O -0.48 -1.06 11.55 -40.57 -0.47 -1.53 16 13 C -0.16 -0.24 5.88 -104.90 -0.62 -0.85 16 14 C 0.56 1.55 7.76 -12.46 -0.10 1.46 16 15 O -0.52 -3.26 15.14 -16.65 -0.25 -3.51 16 16 N -0.73 0.17 5.51 -61.34 -0.34 -0.17 16 17 C 0.12 -0.07 5.67 -4.04 -0.02 -0.10 16 18 C -0.12 0.36 5.15 -26.73 -0.14 0.22 16 19 C -0.11 0.21 3.62 -89.81 -0.32 -0.11 16 20 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 21 C -0.16 0.29 7.54 -25.83 -0.19 0.09 16 22 C 0.06 -0.05 5.69 -25.83 -0.15 -0.20 16 23 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 24 F -0.20 -0.52 17.38 2.25 0.04 -0.48 16 25 C -0.16 0.35 7.54 -25.92 -0.20 0.15 16 26 C -0.05 0.00 9.20 -38.78 -0.36 -0.35 16 27 O -0.17 -0.21 8.78 4.58 0.04 -0.17 16 28 H 0.39 -1.80 8.74 45.56 0.40 -1.40 16 29 H 0.10 -0.34 7.96 -51.92 -0.41 -0.75 16 30 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 31 H -0.25 0.16 7.11 56.52 0.40 0.56 16 32 H 0.15 -0.04 8.06 -52.49 -0.42 -0.46 16 33 H 0.16 -0.30 7.25 -52.49 -0.38 -0.68 16 34 H 0.14 -0.46 6.96 -52.49 -0.37 -0.82 16 35 H 0.15 -0.35 8.06 -52.49 -0.42 -0.78 16 36 H 0.40 -0.61 9.06 45.56 0.41 -0.20 16 37 H 0.40 -1.07 6.50 -40.82 -0.27 -1.34 16 38 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 39 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 40 H 0.07 -0.27 7.87 -51.93 -0.41 -0.68 16 41 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 42 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 43 H 0.10 -0.31 7.92 -51.93 -0.41 -0.72 16 44 H 0.10 -0.37 8.10 -51.93 -0.42 -0.79 16 45 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 46 H 0.14 -0.27 6.24 -52.49 -0.33 -0.60 16 LS Contribution 394.65 15.07 5.95 5.95 Total: 0.00 -10.60 394.65 -11.06 -21.66 By element: Atomic # 1 Polarization: -7.14 SS G_CDS: -5.18 Total: -12.33 kcal Atomic # 6 Polarization: 2.63 SS G_CDS: -4.94 Total: -2.31 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.34 Total: -0.17 kcal Atomic # 8 Polarization: -4.42 SS G_CDS: -1.13 Total: -5.55 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.04 Total: -0.48 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.46 Total: -6.78 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -10.60 -11.06 -21.66 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13259648.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.934 kcal (2) G-P(sol) polarization free energy of solvation -10.601 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.535 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.064 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.665 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.599 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds