Wall clock time and date at job start Sun Mar 7 2021 02:33:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50699 * 109.47152 * 239.99653 * 2 1 3 5 5 C 1.34711 * 125.66298 * 299.71853 * 4 2 1 6 6 C 1.40971 * 107.02455 * 179.85499 * 5 4 2 7 7 C 1.35936 * 106.74468 * 0.40910 * 6 5 4 8 8 C 1.47815 * 125.93282 * 179.75348 * 7 6 5 9 9 C 1.39802 * 119.99725 * 0.02562 * 8 7 6 10 10 C 1.37817 * 120.24147 * 180.02562 * 9 8 7 11 11 C 1.38774 * 120.24719 * 0.02562 * 10 9 8 12 12 O 1.35639 * 120.00328 * 179.97438 * 11 10 9 13 13 C 1.40247 * 119.99300 * 359.97438 * 11 10 9 14 14 C 1.47565 * 120.12007 * 180.02562 * 13 11 10 15 15 O 1.21581 * 120.00146 * 359.97438 * 14 13 11 16 16 N 1.34775 * 119.99898 * 179.97438 * 14 13 11 17 17 C 1.46504 * 120.00056 * 179.97438 * 16 14 13 18 18 C 1.53004 * 109.47212 * 180.02562 * 17 16 14 19 19 C 1.53005 * 109.46739 * 180.02562 * 18 17 16 20 20 H 1.08996 * 112.85080 * 314.66282 * 19 18 17 21 21 C 1.53773 * 113.61491 * 85.86308 * 19 18 17 22 22 C 1.53957 * 87.01941 * 139.94790 * 21 19 18 23 23 H 1.09003 * 113.66567 * 220.06793 * 22 21 19 24 24 F 1.39904 * 113.61247 * 89.19956 * 22 21 19 25 25 C 1.53779 * 87.11244 * 334.63483 * 22 21 19 26 26 C 1.39218 * 120.00024 * 179.74986 * 8 7 6 27 27 O 1.34334 * 125.66370 * 120.03282 * 4 2 1 28 28 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 29 29 H 1.09008 * 109.46477 * 119.99697 * 2 1 3 30 30 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 31 31 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 32 32 H 1.08001 * 126.48496 * 359.97438 * 5 4 2 33 33 H 1.08002 * 126.62319 * 180.12053 * 6 5 4 34 34 H 1.07999 * 119.88317 * 359.97438 * 9 8 7 35 35 H 1.08002 * 119.87652 * 180.02562 * 10 9 8 36 36 H 0.96702 * 114.00354 * 90.00029 * 12 11 10 37 37 H 0.97006 * 120.00423 * 359.97438 * 16 14 13 38 38 H 1.08999 * 109.47116 * 300.00031 * 17 16 14 39 39 H 1.09002 * 109.46831 * 59.99970 * 17 16 14 40 40 H 1.08999 * 109.47030 * 299.99991 * 18 17 16 41 41 H 1.08993 * 109.46845 * 59.99852 * 18 17 16 42 42 H 1.09003 * 113.61559 * 254.52373 * 21 19 18 43 43 H 1.09006 * 113.61689 * 25.43102 * 21 19 18 44 44 H 1.08993 * 113.61618 * 270.81546 * 25 22 21 45 45 H 1.09001 * 113.61729 * 139.90684 * 25 22 21 46 46 H 1.07996 * 120.11918 * 359.97438 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.6816 -1.9943 -1.5530 6 6 2.3347 -2.2470 -2.7765 7 6 2.9607 -1.0939 -3.1317 8 6 3.7776 -0.8891 -4.3465 9 6 3.9597 -1.9390 -5.2516 10 6 4.7207 -1.7537 -6.3855 11 6 5.3124 -0.5239 -6.6371 12 8 6.0609 -0.3472 -7.7544 13 6 5.1364 0.5362 -5.7360 14 6 5.7638 1.8453 -6.0010 15 8 6.4352 2.0062 -7.0018 16 7 5.5927 2.8626 -5.1337 17 6 6.2160 4.1621 -5.3965 18 6 5.8677 5.1328 -4.2663 19 6 6.5182 6.4901 -4.5412 20 1 7.5577 6.4049 -4.8578 21 6 5.6733 7.4071 -5.4411 22 6 6.1013 8.5672 -4.5238 23 1 5.3012 9.2772 -4.3141 24 9 7.2887 9.1894 -4.9242 25 6 6.2986 7.5172 -3.4178 26 6 4.3609 0.3509 -4.5922 27 8 2.7074 -0.1704 -2.1847 28 1 -0.3934 0.4418 0.7650 29 1 1.7923 -0.5138 0.8901 30 1 1.5616 2.4678 -1.2086 31 1 1.5878 2.4586 1.2241 32 1 1.0911 -2.6965 -0.9831 33 1 2.3406 -3.1784 -3.3233 34 1 3.5030 -2.8989 -5.0611 35 1 4.8572 -2.5687 -7.0810 36 1 5.5574 -0.0397 -8.5206 37 1 5.0567 2.7344 -4.3353 38 1 7.2980 4.0417 -5.4509 39 1 5.8464 4.5576 -6.3425 40 1 4.7857 5.2532 -4.2114 41 1 6.2376 4.7370 -3.3205 42 1 6.0539 7.4910 -6.4590 43 1 4.6053 7.1922 -5.4037 44 1 5.4020 7.3322 -2.8263 45 1 7.1832 7.6896 -2.8048 46 1 4.2175 1.1646 -3.8968 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_13259648.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:42 Heat of formation + Delta-G solvation = -86.172996 kcal Electronic energy + Delta-G solvation = -31406.228384 eV Core-core repulsion = 26758.802431 eV Total energy + Delta-G solvation = -4647.425953 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.141 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -48.67304 -43.68637 -41.56298 -39.90780 -39.22975 -38.13894 -37.83827 -36.08977 -34.23242 -33.09633 -32.70075 -31.25309 -30.10181 -26.88584 -26.40433 -26.33142 -24.83987 -23.51761 -22.96051 -22.69194 -21.70464 -21.16675 -20.42617 -19.67547 -18.99524 -18.76988 -17.87146 -17.37786 -17.19777 -17.08670 -16.85474 -16.70937 -16.43857 -16.25180 -16.14045 -15.91689 -15.82562 -15.42689 -15.34356 -14.66893 -14.47014 -14.46300 -14.26927 -14.05342 -13.94856 -13.80494 -13.58432 -13.45116 -13.19540 -13.09441 -13.06891 -12.78044 -12.53177 -12.09787 -12.00286 -11.86486 -11.81777 -11.21489 -11.12254 -11.05813 -10.83650 -10.72169 -10.43036 -10.32638 -10.08477 -8.88787 -4.94854 -0.55889 -0.20675 0.75833 1.17288 1.39747 1.50301 1.71768 1.87292 1.94161 2.03067 2.63011 3.10747 3.20995 3.27862 3.34644 3.44079 3.57773 3.60686 3.66997 3.71350 3.84743 3.87270 4.02625 4.05031 4.12908 4.19937 4.25158 4.32138 4.42563 4.43663 4.59030 4.64544 4.67505 4.72873 4.74386 4.81487 4.82024 4.88938 4.93223 5.02073 5.03180 5.10617 5.15019 5.18448 5.21765 5.34693 5.45300 5.49505 5.51299 6.00876 6.40802 6.52295 6.72196 7.10853 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.046 4.046 3 Si 0.766 3.234 4 C -0.017 4.017 5 C -0.184 4.184 6 C -0.189 4.189 7 C 0.022 3.978 8 C -0.041 4.041 9 C -0.045 4.045 10 C -0.146 4.146 11 C 0.162 3.838 12 O -0.495 6.495 13 C -0.179 4.179 14 C 0.554 3.446 15 O -0.562 6.562 16 N -0.716 5.716 17 C 0.121 3.879 18 C -0.110 4.110 19 C -0.108 4.108 20 H 0.083 0.917 21 C -0.158 4.158 22 C 0.044 3.956 23 H 0.112 0.888 24 F -0.221 7.221 25 C -0.147 4.147 26 C -0.051 4.051 27 O -0.173 6.173 28 H 0.405 0.595 29 H 0.124 0.876 30 H -0.301 1.301 31 H -0.266 1.266 32 H 0.162 0.838 33 H 0.176 0.824 34 H 0.166 0.834 35 H 0.164 0.836 36 H 0.410 0.590 37 H 0.412 0.588 38 H 0.054 0.946 39 H 0.059 0.941 40 H 0.090 0.910 41 H 0.088 0.912 42 H 0.067 0.933 43 H 0.118 0.882 44 H 0.123 0.877 45 H 0.076 0.924 46 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.515 -2.191 6.432 8.158 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.154 4.154 3 Si 0.669 3.331 4 C -0.067 4.067 5 C -0.203 4.203 6 C -0.208 4.208 7 C -0.027 4.027 8 C -0.041 4.041 9 C -0.063 4.063 10 C -0.164 4.164 11 C 0.116 3.884 12 O -0.309 6.309 13 C -0.183 4.183 14 C 0.342 3.658 15 O -0.442 6.442 16 N -0.370 5.370 17 C -0.003 4.003 18 C -0.147 4.147 19 C -0.127 4.127 20 H 0.101 0.899 21 C -0.196 4.196 22 C 0.008 3.992 23 H 0.130 0.870 24 F -0.202 7.202 25 C -0.185 4.185 26 C -0.069 4.069 27 O -0.071 6.071 28 H 0.258 0.742 29 H 0.141 0.859 30 H -0.228 1.228 31 H -0.191 1.191 32 H 0.179 0.821 33 H 0.194 0.806 34 H 0.183 0.817 35 H 0.182 0.818 36 H 0.271 0.729 37 H 0.250 0.750 38 H 0.073 0.927 39 H 0.077 0.923 40 H 0.108 0.892 41 H 0.107 0.893 42 H 0.086 0.914 43 H 0.136 0.864 44 H 0.141 0.859 45 H 0.094 0.906 46 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -3.558 -1.375 5.527 6.716 hybrid contribution -1.481 0.005 0.147 1.488 sum -5.039 -1.370 5.674 7.712 Atomic orbital electron populations 1.86510 1.17451 1.80927 1.51773 1.24036 0.84607 1.12809 0.93933 0.93770 0.90309 0.71583 0.77399 1.21713 0.98704 0.93572 0.92709 1.21785 1.03732 0.96395 0.98377 1.22164 1.00997 0.99565 0.98063 1.20424 1.03083 0.88485 0.90711 1.17693 0.99286 0.94988 0.92122 1.21423 0.94960 0.98894 0.90984 1.21573 0.97836 0.97358 0.99653 1.18898 0.89334 0.91951 0.88236 1.84702 1.36840 1.88885 1.20432 1.20258 1.04478 0.94321 0.99243 1.18292 0.80201 0.84331 0.82988 1.90809 1.40819 1.83711 1.28814 1.45874 1.53524 1.11491 1.26063 1.21384 0.97477 0.81873 0.99521 1.21718 1.02221 0.92894 0.97909 1.22462 0.99744 0.93557 0.96931 0.89873 1.23750 1.02377 0.94717 0.98709 1.22762 0.83739 0.94666 0.98007 0.87021 1.92777 1.50780 1.84639 1.92032 1.23607 1.04668 0.93924 0.96287 1.21412 0.93204 0.97330 0.94993 1.83868 1.55640 1.39493 1.28106 0.74250 0.85880 1.22817 1.19123 0.82058 0.80638 0.81666 0.81811 0.72935 0.74987 0.92719 0.92272 0.89170 0.89308 0.91369 0.86393 0.85916 0.90560 0.83203 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.64 12.85 -148.98 -1.91 -1.27 16 2 C -0.05 0.15 2.97 71.24 0.21 0.36 16 3 Si 0.77 -3.37 32.10 68.60 2.20 -1.17 16 4 C -0.02 -0.03 6.25 24.88 0.16 0.13 16 5 C -0.18 -0.22 10.77 22.13 0.24 0.02 16 6 C -0.19 0.05 10.26 22.40 0.23 0.28 16 7 C 0.02 0.03 7.03 24.27 0.17 0.20 16 8 C -0.04 0.01 5.87 -20.13 -0.12 -0.11 16 9 C -0.04 0.14 9.54 22.55 0.22 0.36 16 10 C -0.15 0.24 9.96 22.30 0.22 0.47 16 11 C 0.16 0.60 6.72 22.89 0.15 0.75 16 12 O -0.50 -3.00 11.55 -68.54 -0.79 -3.79 16 13 C -0.18 -0.68 5.88 -20.04 -0.12 -0.80 16 14 C 0.55 3.94 7.76 86.70 0.67 4.61 16 15 O -0.56 -8.50 15.14 17.02 0.26 -8.24 16 16 N -0.72 -0.19 5.51 -466.23 -2.57 -2.76 16 17 C 0.12 -0.01 5.67 86.38 0.49 0.48 16 18 C -0.11 0.70 5.15 30.60 0.16 0.85 16 19 C -0.11 0.39 3.62 -10.27 -0.04 0.36 16 20 H 0.08 -0.03 8.14 -2.39 -0.02 -0.05 16 21 C -0.16 0.51 7.54 31.18 0.24 0.75 16 22 C 0.04 -0.06 5.69 31.18 0.18 0.11 16 23 H 0.11 -0.56 8.14 -2.39 -0.02 -0.58 16 24 F -0.22 -1.47 17.38 44.97 0.78 -0.68 16 25 C -0.15 0.73 7.54 31.12 0.23 0.97 16 26 C -0.05 0.00 9.20 22.79 0.21 0.21 16 27 O -0.17 -0.37 8.78 -6.52 -0.06 -0.43 16 28 H 0.41 -4.11 8.74 -74.06 -0.65 -4.76 16 29 H 0.12 -1.09 7.96 -2.38 -0.02 -1.11 16 30 H -0.30 -1.20 7.11 99.48 0.71 -0.49 16 31 H -0.27 0.59 7.11 99.48 0.71 1.30 16 32 H 0.16 -0.21 8.06 -2.91 -0.02 -0.24 16 33 H 0.18 -1.01 7.25 -2.91 -0.02 -1.03 16 34 H 0.17 -1.45 6.96 -2.91 -0.02 -1.47 16 35 H 0.16 -0.96 8.06 -2.91 -0.02 -0.98 16 36 H 0.41 -0.44 9.06 -74.06 -0.67 -1.11 16 37 H 0.41 -2.29 6.50 -92.70 -0.60 -2.90 16 38 H 0.05 0.19 8.14 -2.39 -0.02 0.17 16 39 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 40 H 0.09 -0.82 7.87 -2.39 -0.02 -0.84 16 41 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 42 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 43 H 0.12 -0.83 7.92 -2.38 -0.02 -0.85 16 44 H 0.12 -1.16 8.10 -2.39 -0.02 -1.18 16 45 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 46 H 0.15 -0.64 6.24 -2.91 -0.02 -0.66 16 Total: 0.00 -26.62 394.65 0.59 -26.03 By element: Atomic # 1 Polarization: -16.88 SS G_CDS: -0.83 Total: -17.70 kcal Atomic # 6 Polarization: 6.50 SS G_CDS: 3.50 Total: 10.01 kcal Atomic # 7 Polarization: -0.19 SS G_CDS: -2.57 Total: -2.76 kcal Atomic # 8 Polarization: -11.22 SS G_CDS: -2.51 Total: -13.73 kcal Atomic # 9 Polarization: -1.47 SS G_CDS: 0.78 Total: -0.68 kcal Atomic # 14 Polarization: -3.37 SS G_CDS: 2.20 Total: -1.17 kcal Total: -26.62 0.59 -26.03 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13259648.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.141 kcal (2) G-P(sol) polarization free energy of solvation -26.620 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.761 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.588 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.032 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.173 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds