Wall clock time and date at job start Sun Mar 7 2021 02:33:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.47144 * 2 1 4 4 C 1.50696 * 109.47281 * 120.00368 * 2 1 3 5 5 C 1.34196 * 126.53915 * 255.02169 * 4 2 1 6 6 N 1.36866 * 109.96795 * 179.97438 * 5 4 2 7 7 C 1.37394 * 109.97890 * 0.27239 * 6 5 4 8 8 C 1.39336 * 133.24548 * 180.50887 * 7 6 5 9 9 C 1.36357 * 120.23409 * 179.60018 * 8 7 6 10 10 C 1.40166 * 120.66946 * 359.67228 * 9 8 7 11 11 C 1.47649 * 119.97038 * 180.02562 * 10 9 8 12 12 O 1.21586 * 119.99966 * 179.97438 * 11 10 9 13 13 N 1.34781 * 120.00408 * 359.97438 * 11 10 9 14 14 C 1.46496 * 120.00019 * 180.02562 * 13 11 10 15 15 C 1.53003 * 109.46732 * 180.02562 * 14 13 11 16 16 C 1.53004 * 109.46976 * 179.97438 * 15 14 13 17 17 H 1.09001 * 112.85170 * 316.19558 * 16 15 14 18 18 C 1.53781 * 113.61665 * 87.49944 * 16 15 14 19 19 C 1.53775 * 87.08101 * 139.97919 * 18 16 15 20 20 H 1.09003 * 113.61322 * 220.01613 * 19 18 16 21 21 F 1.39905 * 113.61309 * 89.12027 * 19 18 16 22 22 C 1.53774 * 87.08487 * 334.57002 * 19 18 16 23 23 C 1.39187 * 120.05307 * 359.97438 * 10 9 8 24 24 C 1.39227 * 119.39666 * 0.02608 * 23 10 9 25 25 H 0.96695 * 113.99618 * 299.99710 * 1 2 3 26 26 H 1.09004 * 109.47045 * 240.00111 * 2 1 3 27 27 H 1.48502 * 110.00168 * 178.68047 * 3 2 1 28 28 H 1.48500 * 110.00240 * 300.00211 * 3 2 1 29 29 H 1.08001 * 125.01765 * 0.02562 * 5 4 2 30 30 H 0.97001 * 125.00715 * 179.97438 * 6 5 4 31 31 H 1.08001 * 119.88138 * 359.26533 * 8 7 6 32 32 H 1.08002 * 119.66010 * 179.69278 * 9 8 7 33 33 H 0.96999 * 119.99809 * 359.97438 * 13 11 10 34 34 H 1.09001 * 109.47257 * 299.99115 * 14 13 11 35 35 H 1.08997 * 109.47325 * 59.99987 * 14 13 11 36 36 H 1.09002 * 109.46988 * 299.99348 * 15 14 13 37 37 H 1.08997 * 109.47252 * 59.99910 * 15 14 13 38 38 H 1.08998 * 113.61822 * 254.53301 * 18 16 15 39 39 H 1.09006 * 113.61463 * 25.42944 * 18 16 15 40 40 H 1.09001 * 113.61385 * 270.88547 * 22 19 18 41 41 H 1.08999 * 113.61852 * 139.98215 * 22 19 18 42 42 H 1.08003 * 120.30024 * 180.02562 * 23 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.4605 -0.1387 2.3231 6 7 2.8021 -1.1005 3.2349 7 6 2.5004 -2.3458 2.7391 8 6 2.6331 -3.6350 3.2508 9 6 2.2303 -4.7104 2.5156 10 6 1.6722 -4.5369 1.2416 11 6 1.2407 -5.7123 0.4591 12 8 0.7562 -5.5624 -0.6459 13 7 1.3839 -6.9514 0.9696 14 6 0.9563 -8.1176 0.1930 15 6 1.2269 -9.3919 0.9954 16 6 0.7797 -10.6098 0.1845 17 1 -0.1883 -10.4665 -0.2955 18 6 1.8641 -11.1522 -0.7614 19 6 1.3974 -12.5616 -0.3611 20 1 2.2148 -13.2697 -0.2239 21 9 0.3723 -13.0634 -1.1702 22 6 0.8963 -11.9374 0.9519 23 6 1.5236 -3.2575 0.7140 24 6 1.9341 -2.1577 1.4625 25 1 -0.3932 0.4417 0.7651 26 1 1.7924 -0.5138 -0.8900 27 1 3.5346 1.7703 0.0321 28 1 1.5615 2.4679 -1.2084 29 1 2.5958 0.9237 2.4628 30 1 3.2026 -0.9285 4.1015 31 1 3.0616 -3.7833 4.2310 32 1 2.3421 -5.7059 2.9193 33 1 1.7708 -7.0710 1.8510 34 1 -0.1103 -8.0418 -0.0189 35 1 1.5113 -8.1533 -0.7444 36 1 2.2934 -9.4679 1.2076 37 1 0.6716 -9.3559 1.9326 38 1 1.6869 -10.9150 -1.8104 39 1 2.8796 -10.9206 -0.4399 40 1 1.6471 -11.9206 1.7419 41 1 -0.0624 -12.3342 1.2861 42 1 1.0937 -3.1192 -0.2671 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13287722.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:47 Heat of formation + Delta-G solvation = -37.389488 kcal Electronic energy + Delta-G solvation = -25390.190180 eV Core-core repulsion = 21445.044252 eV Total energy + Delta-G solvation = -3945.145928 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.137 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -48.58491 -42.49077 -40.68627 -39.46295 -37.91155 -37.39925 -36.01036 -33.28350 -32.20031 -30.71734 -30.26931 -26.99002 -26.49373 -26.26947 -24.29016 -23.49408 -22.84066 -21.49498 -20.79850 -20.47300 -19.32138 -18.46249 -17.52144 -17.44374 -17.19912 -16.88887 -16.69418 -16.47159 -16.17202 -15.86085 -15.56910 -15.50902 -15.24428 -15.14570 -14.76392 -14.76256 -14.46511 -14.05108 -13.83443 -13.82905 -13.61155 -13.52269 -13.15106 -12.69579 -12.47659 -12.28324 -12.18205 -12.09264 -11.88609 -11.86810 -11.29256 -11.18116 -10.79474 -10.76266 -10.31971 -10.03326 -9.32993 -8.83650 -5.08553 -0.05033 0.18039 1.30571 1.46539 1.64946 1.96228 1.99969 2.02326 2.20600 2.97854 3.18219 3.22946 3.49471 3.56150 3.57550 3.59304 3.73542 3.75942 3.80016 3.85135 4.03109 4.06945 4.20261 4.33691 4.36384 4.42401 4.49684 4.50023 4.53738 4.57170 4.68365 4.73116 4.78389 4.83928 4.93140 5.01251 5.02950 5.06890 5.24435 5.37430 5.38541 5.44456 5.53563 5.59526 5.97225 6.34812 6.56784 6.69736 7.34781 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.035 4.035 3 Si 0.688 3.312 4 C -0.192 4.192 5 C 0.061 3.939 6 N -0.585 5.585 7 C 0.118 3.882 8 C -0.134 4.134 9 C -0.067 4.067 10 C -0.168 4.168 11 C 0.563 3.437 12 O -0.537 6.537 13 N -0.730 5.730 14 C 0.119 3.881 15 C -0.121 4.121 16 C -0.107 4.107 17 H 0.099 0.901 18 C -0.160 4.160 19 C 0.061 3.939 20 H 0.096 0.904 21 F -0.197 7.197 22 C -0.157 4.157 23 C 0.007 3.993 24 C -0.103 4.103 25 H 0.376 0.624 26 H 0.113 0.887 27 H -0.256 1.256 28 H -0.254 1.254 29 H 0.179 0.821 30 H 0.421 0.579 31 H 0.128 0.872 32 H 0.128 0.872 33 H 0.399 0.601 34 H 0.070 0.930 35 H 0.070 0.930 36 H 0.073 0.927 37 H 0.074 0.926 38 H 0.082 0.918 39 H 0.100 0.900 40 H 0.100 0.900 41 H 0.081 0.919 42 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.677 2.040 8.750 9.708 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.146 4.146 3 Si 0.589 3.411 4 C -0.199 4.199 5 C -0.065 4.065 6 N -0.188 5.188 7 C 0.009 3.991 8 C -0.155 4.155 9 C -0.087 4.087 10 C -0.173 4.173 11 C 0.351 3.649 12 O -0.415 6.415 13 N -0.383 5.383 14 C -0.004 4.004 15 C -0.158 4.158 16 C -0.126 4.126 17 H 0.118 0.882 18 C -0.198 4.198 19 C 0.025 3.975 20 H 0.114 0.886 21 F -0.178 7.178 22 C -0.195 4.195 23 C -0.012 4.012 24 C -0.108 4.108 25 H 0.223 0.777 26 H 0.130 0.870 27 H -0.181 1.181 28 H -0.178 1.178 29 H 0.196 0.804 30 H 0.259 0.741 31 H 0.146 0.854 32 H 0.146 0.854 33 H 0.234 0.766 34 H 0.088 0.912 35 H 0.088 0.912 36 H 0.091 0.909 37 H 0.093 0.907 38 H 0.100 0.900 39 H 0.118 0.882 40 H 0.118 0.882 41 H 0.100 0.900 42 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 3.918 2.466 7.039 8.425 hybrid contribution 0.479 -0.676 0.730 1.105 sum 4.397 1.789 7.769 9.105 Atomic orbital electron populations 1.86540 1.17258 1.81725 1.48899 1.24416 0.84916 1.09015 0.96248 0.95337 0.80617 0.77168 0.87991 1.20765 1.09234 0.91977 0.97948 1.21684 1.01076 0.94288 0.89462 1.41732 1.54790 1.04109 1.18123 1.18435 0.99892 0.86521 0.94208 1.19667 1.05842 0.88879 1.01080 1.20581 0.96781 0.98328 0.92988 1.19548 1.08171 0.93284 0.96283 1.18186 0.78059 0.82899 0.85742 1.90807 1.44353 1.86073 1.20246 1.45890 1.65148 1.05884 1.21378 1.21375 1.00741 0.83341 0.94944 1.21775 1.02104 0.92947 0.99014 1.22512 0.99872 0.93371 0.96819 0.88240 1.23690 0.99945 0.94661 1.01476 1.22380 0.88501 0.95703 0.90946 0.88588 1.92831 1.61562 1.88775 1.74606 1.23614 1.03286 0.95974 0.96637 1.20705 0.92444 0.89224 0.98861 1.18930 1.04428 0.92974 0.94435 0.77656 0.87016 1.18098 1.17842 0.80439 0.74109 0.85438 0.85435 0.76575 0.91214 0.91192 0.90852 0.90731 0.89951 0.88183 0.88190 0.89985 0.84398 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.68 12.88 -35.23 -0.45 -1.14 16 2 C -0.03 -0.02 3.06 36.00 0.11 0.09 16 3 Si 0.69 -1.03 30.76 -169.99 -5.23 -6.26 16 4 C -0.19 -0.11 5.58 -102.69 -0.57 -0.68 16 5 C 0.06 -0.13 10.43 -16.73 -0.17 -0.30 16 6 N -0.59 1.26 6.05 -10.61 -0.06 1.19 16 7 C 0.12 0.06 7.27 -83.95 -0.61 -0.55 16 8 C -0.13 0.09 10.00 -39.85 -0.40 -0.31 16 9 C -0.07 0.02 9.46 -39.54 -0.37 -0.35 16 10 C -0.17 -0.43 5.87 -104.98 -0.62 -1.05 16 11 C 0.56 2.17 7.76 -12.42 -0.10 2.07 16 12 O -0.54 -4.29 16.33 5.29 0.09 -4.20 16 13 N -0.73 -0.22 5.51 -61.31 -0.34 -0.56 16 14 C 0.12 0.01 5.66 -4.04 -0.02 -0.02 16 15 C -0.12 0.31 5.16 -26.73 -0.14 0.17 16 16 C -0.11 0.17 3.63 -89.81 -0.33 -0.16 16 17 H 0.10 -0.05 8.13 -51.93 -0.42 -0.47 16 18 C -0.16 0.23 7.53 -25.92 -0.20 0.04 16 19 C 0.06 -0.04 5.69 -25.93 -0.15 -0.18 16 20 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 21 F -0.20 -0.57 17.38 2.25 0.04 -0.53 16 22 C -0.16 0.30 7.54 -25.92 -0.20 0.11 16 23 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 24 C -0.10 -0.25 6.34 -105.16 -0.67 -0.92 16 25 H 0.38 -1.12 8.70 45.56 0.40 -0.73 16 26 H 0.11 0.19 7.96 -51.93 -0.41 -0.23 16 27 H -0.26 -0.22 7.11 56.52 0.40 0.19 16 28 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 29 H 0.18 -1.03 6.35 -52.49 -0.33 -1.37 16 30 H 0.42 -2.21 8.96 -40.82 -0.37 -2.58 16 31 H 0.13 -0.41 8.06 -52.49 -0.42 -0.83 16 32 H 0.13 -0.44 6.36 -52.49 -0.33 -0.77 16 33 H 0.40 -1.07 6.47 -40.82 -0.26 -1.33 16 34 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 35 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 36 H 0.07 -0.26 7.84 -51.93 -0.41 -0.66 16 37 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 38 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 39 H 0.10 -0.28 7.90 -51.93 -0.41 -0.69 16 40 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 41 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.14 0.68 7.64 -52.48 -0.40 0.28 16 LS Contribution 355.08 15.07 5.35 5.35 Total: 0.00 -10.65 355.08 -10.94 -21.59 By element: Atomic # 1 Polarization: -7.52 SS G_CDS: -5.53 Total: -13.06 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -4.80 Total: -2.39 kcal Atomic # 7 Polarization: 1.04 SS G_CDS: -0.40 Total: 0.64 kcal Atomic # 8 Polarization: -4.97 SS G_CDS: -0.37 Total: -5.34 kcal Atomic # 9 Polarization: -0.57 SS G_CDS: 0.04 Total: -0.53 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.23 Total: -6.26 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -10.65 -10.94 -21.59 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13287722.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.799 kcal (2) G-P(sol) polarization free energy of solvation -10.651 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.450 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.590 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.389 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds