Wall clock time and date at job start Sun Mar 7 2021 02:33:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86301 * 109.47067 * 2 1 4 4 C 1.50703 * 109.47257 * 120.00037 * 2 1 3 5 5 C 1.38579 * 120.32139 * 65.00053 * 4 2 1 6 6 C 1.38636 * 118.48186 * 180.02562 * 5 4 2 7 7 C 1.39269 * 119.06397 * 359.97438 * 6 5 4 8 8 C 1.48169 * 119.72018 * 179.97438 * 7 6 5 9 9 O 1.21506 * 120.00417 * 359.97438 * 8 7 6 10 10 N 1.34777 * 119.99431 * 180.02562 * 8 7 6 11 11 C 1.46505 * 119.99677 * 180.02562 * 10 8 7 12 12 C 1.52998 * 109.46970 * 179.97438 * 11 10 8 13 13 C 1.53002 * 109.47128 * 179.97438 * 12 11 10 14 14 H 1.09005 * 112.84987 * 43.80604 * 13 12 11 15 15 C 1.53781 * 113.61609 * 174.99788 * 13 12 11 16 16 C 1.53781 * 87.08070 * 139.98229 * 15 13 12 17 17 H 1.09002 * 113.61408 * 219.93560 * 16 15 13 18 18 F 1.39905 * 113.61459 * 89.11840 * 16 15 13 19 19 C 1.53780 * 87.17569 * 334.52628 * 16 15 13 20 20 N 1.32745 * 120.55484 * 0.25679 * 7 6 5 21 21 C 1.31494 * 121.64064 * 359.47095 * 20 7 6 22 22 H 0.96701 * 114.00413 * 299.99798 * 1 2 3 23 23 H 1.08998 * 109.47294 * 240.00216 * 2 1 3 24 24 H 1.48492 * 110.00341 * 178.68133 * 3 2 1 25 25 H 1.48503 * 110.00038 * 300.00089 * 3 2 1 26 26 H 1.07989 * 120.75909 * 0.02562 * 5 4 2 27 27 H 1.08002 * 120.46942 * 179.97438 * 6 5 4 28 28 H 0.97000 * 120.00624 * 359.97438 * 10 8 7 29 29 H 1.09000 * 109.47304 * 59.99954 * 11 10 8 30 30 H 1.08995 * 109.46811 * 299.99448 * 11 10 8 31 31 H 1.09002 * 109.47755 * 59.99959 * 12 11 10 32 32 H 1.09004 * 109.47220 * 299.99372 * 12 11 10 33 33 H 1.09001 * 113.61537 * 25.43683 * 15 13 12 34 34 H 1.09000 * 113.69133 * 254.54111 * 15 13 12 35 35 H 1.09000 * 113.61662 * 140.01589 * 19 16 15 36 36 H 1.08998 * 113.61573 * 270.93128 * 19 16 15 37 37 H 1.07999 * 119.54771 * 180.26782 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6879 -2.0634 1.4056 6 6 2.1671 -2.6784 2.5519 7 6 2.8730 -1.9195 3.4822 8 6 3.3911 -2.5619 4.7128 9 8 3.1992 -3.7459 4.9071 10 7 4.0745 -1.8326 5.6170 11 6 4.5874 -2.4678 6.8335 12 6 5.3194 -1.4267 7.6827 13 6 5.8545 -2.0900 8.9534 14 1 6.3185 -3.0577 8.7626 15 6 6.7137 -1.1553 9.8212 16 6 6.0238 -1.7845 11.0431 17 1 5.7807 -1.0655 11.8255 18 9 6.6779 -2.9200 11.5330 19 6 4.8417 -2.1073 10.1141 20 7 3.0805 -0.6243 3.2784 21 6 2.6418 -0.0171 2.1978 22 1 -0.3934 0.4417 0.7650 23 1 1.7923 -0.5138 -0.8900 24 1 3.5345 1.7704 0.0321 25 1 1.5614 2.4679 -1.2085 26 1 1.1376 -2.6258 0.6660 27 1 1.9955 -3.7312 2.7212 28 1 4.2274 -0.8873 5.4621 29 1 5.2782 -3.2663 6.5629 30 1 3.7569 -2.8836 7.4040 31 1 4.6289 -0.6279 7.9534 32 1 6.1500 -1.0113 7.1119 33 1 6.4829 -0.0987 9.6854 34 1 7.7818 -1.3657 9.7663 35 1 4.3992 -3.0869 10.2947 36 1 4.1000 -1.3105 10.0582 37 1 2.8336 1.0373 2.0643 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13287726.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:50 Heat of formation + Delta-G solvation = -59.109542 kcal Electronic energy + Delta-G solvation = -20893.716213 eV Core-core repulsion = 17359.618332 eV Total energy + Delta-G solvation = -3534.097880 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.121 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -48.59748 -41.87301 -40.31328 -39.40454 -37.99155 -36.14231 -33.96461 -33.03444 -31.76607 -28.05990 -26.98001 -25.94058 -25.06151 -23.77296 -22.87258 -21.81623 -20.55788 -19.28793 -18.68205 -17.83008 -17.32322 -16.95006 -16.82175 -16.67853 -16.43891 -16.28999 -16.05334 -15.90179 -15.53547 -15.10538 -14.78334 -14.42462 -14.33707 -14.23877 -13.80371 -13.63571 -13.59880 -13.17465 -12.67847 -12.63141 -12.20707 -12.11932 -11.90470 -11.42220 -11.30453 -11.10899 -11.10490 -10.71044 -10.65383 -10.36484 -10.06667 -5.21030 -0.60202 0.01778 1.06909 1.46644 1.62867 1.82643 1.99377 2.67704 2.90954 3.16617 3.21531 3.22786 3.39649 3.47775 3.55054 3.62772 3.70101 3.75171 3.88722 3.98921 4.10407 4.16454 4.26754 4.32691 4.47332 4.49310 4.53179 4.64996 4.68985 4.77681 4.83673 4.90722 4.92465 4.99626 5.04266 5.31069 5.36712 5.37179 6.29392 6.35334 6.59783 7.12591 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.067 4.067 3 Si 0.686 3.314 4 C -0.151 4.151 5 C -0.053 4.053 6 C -0.108 4.108 7 C 0.081 3.919 8 C 0.571 3.429 9 O -0.529 6.529 10 N -0.711 5.711 11 C 0.117 3.883 12 C -0.121 4.121 13 C -0.107 4.107 14 H 0.099 0.901 15 C -0.157 4.157 16 C 0.061 3.939 17 H 0.096 0.904 18 F -0.197 7.197 19 C -0.160 4.160 20 N -0.454 5.454 21 C 0.105 3.895 22 H 0.381 0.619 23 H 0.120 0.880 24 H -0.252 1.252 25 H -0.249 1.249 26 H 0.148 0.852 27 H 0.153 0.847 28 H 0.412 0.588 29 H 0.071 0.929 30 H 0.072 0.928 31 H 0.075 0.925 32 H 0.075 0.925 33 H 0.100 0.900 34 H 0.081 0.919 35 H 0.082 0.918 36 H 0.100 0.900 37 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.963 5.614 0.358 5.707 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.178 4.178 3 Si 0.587 3.413 4 C -0.153 4.153 5 C -0.078 4.078 6 C -0.129 4.129 7 C -0.057 4.057 8 C 0.355 3.645 9 O -0.404 6.404 10 N -0.363 5.363 11 C -0.006 4.006 12 C -0.158 4.158 13 C -0.126 4.126 14 H 0.117 0.883 15 C -0.195 4.195 16 C 0.025 3.975 17 H 0.114 0.886 18 F -0.178 7.178 19 C -0.198 4.198 20 N -0.165 5.165 21 C -0.055 4.055 22 H 0.229 0.771 23 H 0.138 0.862 24 H -0.177 1.177 25 H -0.173 1.173 26 H 0.165 0.835 27 H 0.171 0.829 28 H 0.248 0.752 29 H 0.089 0.911 30 H 0.091 0.909 31 H 0.093 0.907 32 H 0.094 0.906 33 H 0.119 0.881 34 H 0.100 0.900 35 H 0.101 0.899 36 H 0.119 0.881 37 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -0.026 5.451 0.223 5.456 hybrid contribution -0.243 -0.724 -0.885 1.169 sum -0.268 4.727 -0.662 4.781 Atomic orbital electron populations 1.86543 1.16567 1.81672 1.49321 1.25052 0.85602 1.10448 0.96730 0.94832 0.81248 0.77242 0.87963 1.21658 0.99487 0.95867 0.98309 1.21567 0.95804 0.93750 0.96725 1.22237 0.95298 1.02340 0.92975 1.21169 0.98512 0.90227 0.95802 1.17845 0.78354 0.85944 0.82324 1.90824 1.57853 1.14847 1.76889 1.45837 1.55443 1.14074 1.20954 1.21458 0.98623 0.95967 0.84582 1.21773 1.00354 0.97996 0.95724 1.22561 0.96940 0.99956 0.93107 0.88269 1.23610 1.00792 1.00369 0.94723 1.22384 0.93906 0.85313 0.95928 0.88585 1.92830 1.82469 1.53242 1.89262 1.23740 0.96711 1.04001 0.95310 1.67504 1.18158 1.09493 1.21301 1.22598 0.94289 0.99729 0.88881 0.77132 0.86247 1.17710 1.17341 0.83468 0.82949 0.75195 0.91057 0.90943 0.90668 0.90615 0.88133 0.89989 0.89948 0.88131 0.81899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.82 12.84 -35.23 -0.45 0.36 16 2 C -0.07 0.14 2.82 36.01 0.10 0.24 16 3 Si 0.69 -1.97 29.83 -169.99 -5.07 -7.04 16 4 C -0.15 0.20 5.37 -104.36 -0.56 -0.36 16 5 C -0.05 0.03 9.83 -39.31 -0.39 -0.35 16 6 C -0.11 -0.08 9.63 -39.05 -0.38 -0.46 16 7 C 0.08 0.13 6.75 -83.01 -0.56 -0.43 16 8 C 0.57 1.63 7.81 -12.18 -0.10 1.54 16 9 O -0.53 -3.16 16.32 5.36 0.09 -3.07 16 10 N -0.71 -0.18 5.55 -61.15 -0.34 -0.52 16 11 C 0.12 -0.06 5.66 -4.04 -0.02 -0.09 16 12 C -0.12 0.34 5.17 -26.73 -0.14 0.20 16 13 C -0.11 0.21 3.63 -89.66 -0.33 -0.12 16 14 H 0.10 -0.10 8.13 -51.93 -0.42 -0.52 16 15 C -0.16 0.34 7.54 -25.92 -0.20 0.14 16 16 C 0.06 -0.05 5.68 -25.92 -0.15 -0.20 16 17 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 18 F -0.20 -0.51 17.38 2.25 0.04 -0.47 16 19 C -0.16 0.30 7.55 -25.77 -0.19 0.11 16 20 N -0.45 -0.24 9.54 -9.80 -0.09 -0.34 16 21 C 0.10 -0.13 9.84 -17.56 -0.17 -0.30 16 22 H 0.38 -2.03 8.70 45.56 0.40 -1.63 16 23 H 0.12 -0.22 7.96 -51.93 -0.41 -0.64 16 24 H -0.25 0.14 7.11 56.52 0.40 0.54 16 25 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 26 H 0.15 -0.29 8.06 -52.49 -0.42 -0.72 16 27 H 0.15 0.08 7.64 -52.49 -0.40 -0.32 16 28 H 0.41 -0.56 7.80 -40.82 -0.32 -0.88 16 29 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 30 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 31 H 0.07 -0.27 7.85 -51.93 -0.41 -0.67 16 32 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 33 H 0.10 -0.36 8.10 -51.93 -0.42 -0.78 16 34 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 35 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 36 H 0.10 -0.33 7.90 -51.93 -0.41 -0.74 16 37 H 0.16 -0.62 4.92 -52.49 -0.26 -0.88 16 LS Contribution 318.86 15.07 4.81 4.81 Total: 0.00 -7.58 318.86 -8.91 -16.49 By element: Atomic # 1 Polarization: -5.33 SS G_CDS: -4.81 Total: -10.14 kcal Atomic # 6 Polarization: 3.00 SS G_CDS: -3.07 Total: -0.07 kcal Atomic # 7 Polarization: -0.43 SS G_CDS: -0.43 Total: -0.86 kcal Atomic # 8 Polarization: -2.34 SS G_CDS: -0.36 Total: -2.71 kcal Atomic # 9 Polarization: -0.51 SS G_CDS: 0.04 Total: -0.47 kcal Atomic # 14 Polarization: -1.97 SS G_CDS: -5.07 Total: -7.04 kcal Total LS contribution 4.81 Total: 4.81 kcal Total: -7.58 -8.91 -16.49 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13287726.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.620 kcal (2) G-P(sol) polarization free energy of solvation -7.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.200 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.909 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.490 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.110 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds