Wall clock time and date at job start Sun Mar 7 2021 02:33:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34663 * 124.85048 * 2 1 4 4 C 1.36772 * 108.39522 * 179.97438 * 3 2 1 5 5 C 1.47256 * 126.94045 * 179.97438 * 4 3 2 6 6 O 1.21634 * 119.99981 * 180.02562 * 5 4 3 7 7 N 1.34777 * 120.00214 * 0.02855 * 5 4 3 8 8 C 1.46500 * 120.00376 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.47473 * 180.02562 * 8 7 5 10 10 C 1.53000 * 109.47060 * 180.02562 * 9 8 7 11 11 H 1.08990 * 112.85361 * 45.33374 * 10 9 8 12 12 C 1.53787 * 113.61270 * 176.53152 * 10 9 8 13 13 C 1.53778 * 87.08069 * 139.97924 * 12 10 9 14 14 H 1.09006 * 113.60963 * 220.01741 * 13 12 10 15 15 F 1.39900 * 113.61867 * 89.11690 * 13 12 10 16 16 C 1.53783 * 113.61182 * 274.13424 * 10 9 8 17 17 C 1.46687 * 106.11499 * 0.26555 * 4 3 2 18 18 C 1.34483 * 106.33372 * 359.56203 * 17 4 3 19 19 C 1.50698 * 125.57163 * 180.14772 * 18 17 4 20 20 O 1.42899 * 109.47198 * 210.33647 * 19 18 17 21 21 Si 1.86299 * 109.47471 * 330.33856 * 19 18 17 22 22 H 1.08997 * 109.47055 * 90.02843 * 1 2 3 23 23 H 1.09001 * 109.47164 * 210.02355 * 1 2 3 24 24 H 1.09001 * 109.47065 * 330.03069 * 1 2 3 25 25 H 1.07994 * 125.79984 * 359.95305 * 3 2 1 26 26 H 0.97004 * 120.00228 * 359.97438 * 7 5 4 27 27 H 1.09002 * 109.47129 * 59.99747 * 8 7 5 28 28 H 1.08998 * 109.46845 * 300.00553 * 8 7 5 29 29 H 1.09002 * 109.47153 * 59.99757 * 9 8 7 30 30 H 1.09001 * 109.46832 * 299.99948 * 9 8 7 31 31 H 1.09000 * 113.61079 * 254.52465 * 12 10 9 32 32 H 1.08993 * 113.61125 * 25.34288 * 12 10 9 33 33 H 1.09003 * 113.61584 * 334.56887 * 16 10 9 34 34 H 1.09000 * 113.61286 * 105.47141 * 16 10 9 35 35 H 1.08004 * 126.82979 * 179.74173 * 17 4 3 36 36 H 1.09004 * 109.47363 * 90.33914 * 19 18 17 37 37 H 0.96696 * 114.00130 * 179.97438 * 20 19 18 38 38 H 1.48496 * 110.00105 * 178.68002 * 21 19 18 39 39 H 1.48502 * 110.00062 * 300.00276 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7177 0.0006 5 6 4.7283 1.5957 0.0003 6 8 5.8447 1.1128 0.0004 7 7 4.5734 2.9346 -0.0001 8 6 5.7494 3.8082 -0.0010 9 6 5.2987 5.2702 -0.0006 10 6 6.5270 6.1825 -0.0022 11 1 7.2870 5.8680 -0.7174 12 6 6.1828 7.6790 -0.0872 13 6 7.3114 7.9159 0.9301 14 1 7.0696 8.6653 1.6838 15 9 8.5635 8.1208 0.3405 16 6 7.0838 6.4684 1.4025 17 6 3.5375 -0.7492 -0.0056 18 6 2.2447 -1.1197 0.0006 19 6 1.7398 -2.5396 0.0007 20 8 0.4811 -2.5976 -0.6732 21 14 2.9651 -3.6347 -0.8769 22 1 -0.3633 -0.0005 -1.0276 23 1 -0.3633 -0.8898 0.5142 24 1 -0.3633 0.8903 0.5134 25 1 1.8767 2.1240 -0.0007 26 1 3.6831 3.3198 -0.0005 27 1 6.3471 3.6120 -0.8912 28 1 6.3479 3.6125 0.8887 29 1 4.7013 5.4661 0.8898 30 1 4.7000 5.4661 -0.8902 31 1 6.3782 8.1170 -1.0660 32 1 5.1911 7.9212 0.2946 33 1 6.3393 6.3793 2.1938 34 1 8.0054 5.9305 1.6247 35 1 4.3981 -1.4017 -0.0108 36 1 1.6177 -2.8817 1.0284 37 1 0.0960 -3.4837 -0.7117 38 1 2.4941 -5.0428 -0.8557 39 1 3.1405 -3.1787 -2.2792 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13287730.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:54 Heat of formation + Delta-G solvation = -47.101225 kcal Electronic energy + Delta-G solvation = -21611.529833 eV Core-core repulsion = 18050.641194 eV Total energy + Delta-G solvation = -3560.888639 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.137 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -48.56970 -42.37527 -40.16823 -39.28689 -37.93082 -35.83182 -33.77378 -32.25911 -31.04755 -27.77761 -26.95764 -26.47025 -25.55156 -23.47598 -22.71010 -20.97342 -20.57675 -20.12623 -18.63030 -18.53995 -17.36170 -16.92721 -16.82858 -16.67919 -16.55959 -16.22905 -15.84631 -15.65145 -15.50298 -15.19992 -14.49187 -14.46070 -14.31510 -13.87591 -13.74011 -13.58650 -13.41874 -13.27065 -13.17795 -13.00124 -12.74716 -12.50173 -12.06364 -12.01301 -11.85727 -11.27166 -11.14513 -10.87845 -10.66708 -9.94225 -9.50164 -9.13055 -4.92696 0.82183 1.04826 1.52180 1.59013 1.87711 2.05389 2.36078 2.76338 3.00315 3.20067 3.25251 3.52085 3.60835 3.64473 3.79252 3.79415 3.85238 4.02588 4.17173 4.22536 4.30404 4.33968 4.38039 4.52427 4.53036 4.55689 4.57401 4.70917 4.76358 4.85621 4.94889 4.96123 5.04025 5.07973 5.14081 5.40586 5.57307 5.75728 6.04768 6.16580 6.25622 6.71470 7.53276 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.075 3.925 2 N -0.424 5.424 3 C 0.048 3.952 4 C -0.226 4.226 5 C 0.591 3.409 6 O -0.541 6.541 7 N -0.734 5.734 8 C 0.121 3.879 9 C -0.120 4.120 10 C -0.107 4.107 11 H 0.099 0.901 12 C -0.158 4.158 13 C 0.061 3.939 14 H 0.096 0.904 15 F -0.197 7.197 16 C -0.160 4.160 17 C -0.134 4.134 18 C 0.024 3.976 19 C -0.050 4.050 20 O -0.543 6.543 21 Si 0.707 3.293 22 H 0.076 0.924 23 H 0.093 0.907 24 H 0.079 0.921 25 H 0.170 0.830 26 H 0.396 0.604 27 H 0.068 0.932 28 H 0.069 0.931 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.081 0.919 32 H 0.099 0.901 33 H 0.100 0.900 34 H 0.082 0.918 35 H 0.159 0.841 36 H 0.080 0.920 37 H 0.384 0.616 38 H -0.258 1.258 39 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.292 0.809 2.520 6.826 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 N -0.098 5.098 3 C -0.088 4.088 4 C -0.236 4.236 5 C 0.379 3.621 6 O -0.419 6.419 7 N -0.386 5.386 8 C -0.002 4.002 9 C -0.158 4.158 10 C -0.125 4.125 11 H 0.117 0.883 12 C -0.195 4.195 13 C 0.025 3.975 14 H 0.114 0.886 15 F -0.178 7.178 16 C -0.197 4.197 17 C -0.158 4.158 18 C -0.085 4.085 19 C -0.159 4.159 20 O -0.351 6.351 21 Si 0.605 3.395 22 H 0.095 0.905 23 H 0.112 0.888 24 H 0.098 0.902 25 H 0.187 0.813 26 H 0.230 0.770 27 H 0.086 0.914 28 H 0.087 0.913 29 H 0.091 0.909 30 H 0.091 0.909 31 H 0.100 0.900 32 H 0.118 0.882 33 H 0.118 0.882 34 H 0.101 0.899 35 H 0.176 0.824 36 H 0.098 0.902 37 H 0.233 0.767 38 H -0.183 1.183 39 H -0.176 1.176 Dipole moment (debyes) X Y Z Total from point charges -5.567 0.517 1.771 5.865 hybrid contribution -1.695 0.033 -0.121 1.700 sum -7.262 0.550 1.651 7.468 Atomic orbital electron populations 1.22145 0.76247 1.04272 1.03926 1.43449 1.07113 1.04989 1.54220 1.21894 0.90119 0.91731 1.05094 1.20254 0.91468 0.93821 1.18057 1.17366 0.88050 0.81220 0.75423 1.90791 1.25810 1.75187 1.50074 1.45827 1.09738 1.05944 1.77100 1.21327 0.87920 0.88231 1.02750 1.21766 0.97770 0.93315 1.02953 1.22508 0.97792 0.94379 0.97869 0.88271 1.23608 0.98995 0.96387 1.00548 1.22420 0.80182 0.98788 0.96147 0.88613 1.92828 1.43185 1.96101 1.85675 1.23714 1.02937 0.95386 0.97684 1.21541 0.94486 0.93154 1.06642 1.19660 0.90207 0.86860 1.11732 1.24432 0.92860 0.97250 1.01354 1.86523 1.34204 1.34806 1.79588 0.94276 0.86313 0.76150 0.82712 0.90519 0.88818 0.90234 0.81272 0.76996 0.91359 0.91263 0.90925 0.90855 0.90034 0.88227 0.88200 0.89912 0.82408 0.90234 0.76716 1.18274 1.17622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.15 9.81 59.85 0.59 0.44 16 2 N -0.42 -0.26 3.09 -119.90 -0.37 -0.63 16 3 C 0.05 0.00 10.83 -16.84 -0.18 -0.18 16 4 C -0.23 -0.60 6.29 -103.35 -0.65 -1.25 16 5 C 0.59 2.32 7.81 -12.60 -0.10 2.22 16 6 O -0.54 -4.31 16.97 5.25 0.09 -4.22 16 7 N -0.73 -0.22 5.55 -61.44 -0.34 -0.56 16 8 C 0.12 0.00 5.67 -4.04 -0.02 -0.02 16 9 C -0.12 0.31 5.15 -26.73 -0.14 0.17 16 10 C -0.11 0.17 3.62 -89.80 -0.32 -0.15 16 11 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 12 C -0.16 0.30 7.54 -25.92 -0.20 0.11 16 13 C 0.06 -0.04 5.70 -25.83 -0.15 -0.19 16 14 H 0.10 -0.20 8.14 -51.93 -0.42 -0.63 16 15 F -0.20 -0.56 17.38 2.25 0.04 -0.52 16 16 C -0.16 0.24 7.54 -25.82 -0.19 0.05 16 17 C -0.13 -0.35 9.49 -37.50 -0.36 -0.71 16 18 C 0.02 0.04 6.18 -81.87 -0.51 -0.47 16 19 C -0.05 0.03 2.86 36.00 0.10 0.14 16 20 O -0.54 0.49 10.29 -35.23 -0.36 0.13 16 21 Si 0.71 -0.49 31.11 -169.99 -5.29 -5.78 16 22 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 23 H 0.09 -0.18 6.73 -51.93 -0.35 -0.53 16 24 H 0.08 -0.32 8.13 -51.93 -0.42 -0.74 16 25 H 0.17 -0.63 7.45 -52.49 -0.39 -1.02 16 26 H 0.40 -1.08 7.42 -40.82 -0.30 -1.38 16 27 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 28 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 29 H 0.07 -0.25 7.88 -51.93 -0.41 -0.66 16 30 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 31 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 32 H 0.10 -0.34 8.10 -51.93 -0.42 -0.76 16 33 H 0.10 -0.29 7.92 -51.93 -0.41 -0.70 16 34 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 35 H 0.16 0.22 6.88 -52.48 -0.36 -0.14 16 36 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 37 H 0.38 -1.78 8.74 45.56 0.40 -1.38 16 38 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 39 H -0.25 -0.83 7.11 56.52 0.40 -0.43 16 LS Contribution 329.40 15.07 4.96 4.96 Total: 0.00 -9.50 329.40 -9.06 -18.55 By element: Atomic # 1 Polarization: -6.43 SS G_CDS: -5.66 Total: -12.09 kcal Atomic # 6 Polarization: 2.29 SS G_CDS: -2.12 Total: 0.16 kcal Atomic # 7 Polarization: -0.48 SS G_CDS: -0.71 Total: -1.19 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -0.27 Total: -4.09 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.04 Total: -0.52 kcal Atomic # 14 Polarization: -0.49 SS G_CDS: -5.29 Total: -5.78 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -9.50 -9.06 -18.55 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13287730.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.549 kcal (2) G-P(sol) polarization free energy of solvation -9.497 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.046 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.552 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.101 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds