Wall clock time and date at job start Sun Mar 7 2021 02:33:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34663 * 124.85048 * 2 1 4 4 C 1.36772 * 108.39522 * 179.97438 * 3 2 1 5 5 C 1.47256 * 126.94045 * 179.97438 * 4 3 2 6 6 O 1.21634 * 119.99981 * 180.02562 * 5 4 3 7 7 N 1.34777 * 120.00214 * 0.02855 * 5 4 3 8 8 C 1.46500 * 120.00376 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.47473 * 180.02562 * 8 7 5 10 10 C 1.53000 * 109.47060 * 180.02562 * 9 8 7 11 11 H 1.08990 * 112.85361 * 45.33374 * 10 9 8 12 12 C 1.53787 * 113.61270 * 176.53152 * 10 9 8 13 13 C 1.53778 * 87.08069 * 139.97924 * 12 10 9 14 14 H 1.09006 * 113.60963 * 220.01741 * 13 12 10 15 15 F 1.39900 * 113.61867 * 89.11690 * 13 12 10 16 16 C 1.53783 * 113.61182 * 274.13424 * 10 9 8 17 17 C 1.46687 * 106.11499 * 0.26555 * 4 3 2 18 18 C 1.34483 * 106.33372 * 359.56203 * 17 4 3 19 19 C 1.50698 * 125.57163 * 180.14772 * 18 17 4 20 20 O 1.42899 * 109.47198 * 210.33647 * 19 18 17 21 21 Si 1.86299 * 109.47471 * 330.33856 * 19 18 17 22 22 H 1.08997 * 109.47055 * 90.02843 * 1 2 3 23 23 H 1.09001 * 109.47164 * 210.02355 * 1 2 3 24 24 H 1.09001 * 109.47065 * 330.03069 * 1 2 3 25 25 H 1.07994 * 125.79984 * 359.95305 * 3 2 1 26 26 H 0.97004 * 120.00228 * 359.97438 * 7 5 4 27 27 H 1.09002 * 109.47129 * 59.99747 * 8 7 5 28 28 H 1.08998 * 109.46845 * 300.00553 * 8 7 5 29 29 H 1.09002 * 109.47153 * 59.99757 * 9 8 7 30 30 H 1.09001 * 109.46832 * 299.99948 * 9 8 7 31 31 H 1.09000 * 113.61079 * 254.52465 * 12 10 9 32 32 H 1.08993 * 113.61125 * 25.34288 * 12 10 9 33 33 H 1.09003 * 113.61584 * 334.56887 * 16 10 9 34 34 H 1.09000 * 113.61286 * 105.47141 * 16 10 9 35 35 H 1.08004 * 126.82979 * 179.74173 * 17 4 3 36 36 H 1.09004 * 109.47363 * 90.33914 * 19 18 17 37 37 H 0.96696 * 114.00130 * 179.97438 * 20 19 18 38 38 H 1.48496 * 110.00105 * 178.68002 * 21 19 18 39 39 H 1.48502 * 110.00062 * 300.00276 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7177 0.0006 5 6 4.7283 1.5957 0.0003 6 8 5.8447 1.1128 0.0004 7 7 4.5734 2.9346 -0.0001 8 6 5.7494 3.8082 -0.0010 9 6 5.2987 5.2702 -0.0006 10 6 6.5270 6.1825 -0.0022 11 1 7.2870 5.8680 -0.7174 12 6 6.1828 7.6790 -0.0872 13 6 7.3114 7.9159 0.9301 14 1 7.0696 8.6653 1.6838 15 9 8.5635 8.1208 0.3405 16 6 7.0838 6.4684 1.4025 17 6 3.5375 -0.7492 -0.0056 18 6 2.2447 -1.1197 0.0006 19 6 1.7398 -2.5396 0.0007 20 8 0.4811 -2.5976 -0.6732 21 14 2.9651 -3.6347 -0.8769 22 1 -0.3633 -0.0005 -1.0276 23 1 -0.3633 -0.8898 0.5142 24 1 -0.3633 0.8903 0.5134 25 1 1.8767 2.1240 -0.0007 26 1 3.6831 3.3198 -0.0005 27 1 6.3471 3.6120 -0.8912 28 1 6.3479 3.6125 0.8887 29 1 4.7013 5.4661 0.8898 30 1 4.7000 5.4661 -0.8902 31 1 6.3782 8.1170 -1.0660 32 1 5.1911 7.9212 0.2946 33 1 6.3393 6.3793 2.1938 34 1 8.0054 5.9305 1.6247 35 1 4.3981 -1.4017 -0.0108 36 1 1.6177 -2.8817 1.0284 37 1 0.0960 -3.4837 -0.7117 38 1 2.4941 -5.0428 -0.8557 39 1 3.1405 -3.1787 -2.2792 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_13287730.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:53 Heat of formation + Delta-G solvation = -46.925891 kcal Electronic energy + Delta-G solvation = -21611.522230 eV Core-core repulsion = 18050.641194 eV Total energy + Delta-G solvation = -3560.881036 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.137 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -48.65091 -42.39948 -40.32068 -39.25941 -37.84596 -35.99173 -33.76804 -32.27419 -31.02065 -27.71930 -26.82208 -26.43835 -25.52076 -23.49999 -22.70577 -21.05683 -20.51655 -20.13972 -18.60648 -18.47046 -17.37073 -16.92855 -16.85778 -16.69024 -16.57523 -16.27149 -15.89593 -15.62443 -15.48354 -15.24460 -14.56482 -14.46294 -14.40141 -13.89313 -13.76733 -13.45222 -13.33251 -13.19602 -13.13703 -12.99211 -12.70939 -12.45990 -12.11930 -11.93524 -11.77752 -11.21480 -11.13355 -10.86841 -10.79165 -10.12816 -9.55790 -9.15519 -4.90004 0.74970 1.01548 1.49154 1.56447 1.87563 2.05543 2.30802 2.57090 3.13477 3.31300 3.38142 3.64467 3.69094 3.74775 3.88680 3.91134 3.97925 4.14096 4.28324 4.34555 4.39203 4.48563 4.49244 4.50595 4.63489 4.75665 4.76487 4.81161 4.86166 4.93024 4.96855 5.00010 5.06081 5.18241 5.23333 5.49330 5.52582 5.67949 6.00815 6.24419 6.51116 6.66766 7.36097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.072 3.928 2 N -0.428 5.428 3 C 0.069 3.931 4 C -0.261 4.261 5 C 0.585 3.415 6 O -0.596 6.596 7 N -0.716 5.716 8 C 0.121 3.879 9 C -0.105 4.105 10 C -0.110 4.110 11 H 0.080 0.920 12 C -0.147 4.147 13 C 0.044 3.956 14 H 0.113 0.887 15 F -0.222 7.222 16 C -0.157 4.157 17 C -0.162 4.162 18 C 0.014 3.986 19 C -0.044 4.044 20 O -0.553 6.553 21 Si 0.762 3.238 22 H 0.074 0.926 23 H 0.094 0.906 24 H 0.106 0.894 25 H 0.211 0.789 26 H 0.414 0.586 27 H 0.048 0.952 28 H 0.055 0.945 29 H 0.094 0.906 30 H 0.085 0.915 31 H 0.073 0.927 32 H 0.124 0.876 33 H 0.121 0.879 34 H 0.066 0.934 35 H 0.155 0.845 36 H 0.104 0.896 37 H 0.400 0.600 38 H -0.270 1.270 39 H -0.313 1.313 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.957 1.814 3.513 9.791 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 N -0.101 5.101 3 C -0.068 4.068 4 C -0.271 4.271 5 C 0.376 3.624 6 O -0.478 6.478 7 N -0.368 5.368 8 C -0.002 4.002 9 C -0.143 4.143 10 C -0.129 4.129 11 H 0.098 0.902 12 C -0.185 4.185 13 C 0.008 3.992 14 H 0.131 0.869 15 F -0.203 7.203 16 C -0.195 4.195 17 C -0.186 4.186 18 C -0.095 4.095 19 C -0.154 4.154 20 O -0.364 6.364 21 Si 0.667 3.333 22 H 0.093 0.907 23 H 0.113 0.887 24 H 0.124 0.876 25 H 0.227 0.773 26 H 0.251 0.749 27 H 0.066 0.934 28 H 0.074 0.926 29 H 0.112 0.888 30 H 0.103 0.897 31 H 0.092 0.908 32 H 0.142 0.858 33 H 0.139 0.861 34 H 0.085 0.915 35 H 0.172 0.828 36 H 0.122 0.878 37 H 0.252 0.748 38 H -0.196 1.196 39 H -0.241 1.241 Dipole moment (debyes) X Y Z Total from point charges -8.281 1.530 2.785 8.870 hybrid contribution -0.891 -0.280 -0.496 1.057 sum -9.172 1.250 2.290 9.536 Atomic orbital electron populations 1.22329 0.74532 1.05706 1.04239 1.43734 1.08207 1.04766 1.53424 1.22423 0.88991 0.93228 1.02153 1.20294 0.92260 0.93816 1.20726 1.17688 0.87730 0.82311 0.74712 1.90752 1.27802 1.76289 1.52978 1.45674 1.10793 1.04857 1.75506 1.21320 0.87757 0.89980 1.01192 1.21676 0.97439 0.90645 1.04532 1.22474 0.97858 0.95130 0.97449 0.90200 1.23606 0.99570 0.95440 0.99867 1.22778 0.79475 0.99828 0.97129 0.86874 1.92773 1.45067 1.96284 1.86201 1.23753 1.02844 0.94578 0.98285 1.21750 0.95278 0.93761 1.07812 1.19914 0.90116 0.88176 1.11319 1.24352 0.92671 0.95849 1.02513 1.86482 1.33827 1.36434 1.79640 0.93512 0.85768 0.74736 0.79331 0.90690 0.88745 0.87562 0.77282 0.74896 0.93355 0.92634 0.88788 0.89651 0.90823 0.85757 0.86120 0.91486 0.82778 0.87838 0.74800 1.19578 1.24055 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.43 9.81 127.77 1.25 0.82 16 2 N -0.43 0.03 3.09 -533.24 -1.65 -1.62 16 3 C 0.07 -0.09 10.83 83.92 0.91 0.82 16 4 C -0.26 -1.56 6.29 -19.04 -0.12 -1.68 16 5 C 0.59 5.43 7.81 86.61 0.68 6.11 16 6 O -0.60 -11.31 16.97 -4.14 -0.07 -11.38 16 7 N -0.72 -0.41 5.55 -466.53 -2.59 -3.00 16 8 C 0.12 0.10 5.67 86.38 0.49 0.59 16 9 C -0.11 0.67 5.15 30.59 0.16 0.82 16 10 C -0.11 0.35 3.62 -10.26 -0.04 0.32 16 11 H 0.08 0.05 8.14 -2.39 -0.02 0.03 16 12 C -0.15 0.71 7.54 31.12 0.23 0.94 16 13 C 0.04 -0.06 5.70 31.18 0.18 0.12 16 14 H 0.11 -0.59 8.14 -2.38 -0.02 -0.61 16 15 F -0.22 -1.55 17.38 44.97 0.78 -0.77 16 16 C -0.16 0.49 7.54 31.18 0.24 0.72 16 17 C -0.16 -1.07 9.49 23.62 0.22 -0.85 16 18 C 0.01 0.04 6.18 40.98 0.25 0.30 16 19 C -0.04 0.08 2.86 71.24 0.20 0.28 16 20 O -0.55 1.51 10.29 -148.98 -1.53 -0.03 16 21 Si 0.76 -0.15 31.11 68.60 2.13 1.98 16 22 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 23 H 0.09 -0.55 6.73 -2.39 -0.02 -0.57 16 24 H 0.11 -1.20 8.13 -2.39 -0.02 -1.22 16 25 H 0.21 -2.27 7.45 -2.91 -0.02 -2.29 16 26 H 0.41 -2.98 7.42 -92.71 -0.69 -3.66 16 27 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 28 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 29 H 0.09 -0.93 7.88 -2.39 -0.02 -0.95 16 30 H 0.08 -0.69 8.14 -2.39 -0.02 -0.71 16 31 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 32 H 0.12 -1.20 8.10 -2.39 -0.02 -1.22 16 33 H 0.12 -0.89 7.92 -2.39 -0.02 -0.91 16 34 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 35 H 0.15 0.87 6.88 -2.91 -0.02 0.85 16 36 H 0.10 -0.65 7.96 -2.39 -0.02 -0.66 16 37 H 0.40 -4.16 8.74 -74.06 -0.65 -4.81 16 38 H -0.27 -0.46 7.11 99.48 0.71 0.25 16 39 H -0.31 -3.11 7.11 99.48 0.71 -2.40 16 Total: 0.00 -26.13 329.40 1.51 -24.62 By element: Atomic # 1 Polarization: -18.89 SS G_CDS: -0.23 Total: -19.12 kcal Atomic # 6 Polarization: 4.65 SS G_CDS: 4.66 Total: 9.30 kcal Atomic # 7 Polarization: -0.38 SS G_CDS: -4.23 Total: -4.62 kcal Atomic # 8 Polarization: -9.80 SS G_CDS: -1.60 Total: -11.40 kcal Atomic # 9 Polarization: -1.55 SS G_CDS: 0.78 Total: -0.77 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: 2.13 Total: 1.98 kcal Total: -26.13 1.51 -24.62 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13287730.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.304 kcal (2) G-P(sol) polarization free energy of solvation -26.128 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.432 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.506 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.622 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.926 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds