Wall clock time and date at job start Sun Mar 7 2021 02:33:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38974 * 119.95655 * 2 1 4 4 O 1.35708 * 119.91044 * 359.97438 * 3 2 1 5 5 C 1.39020 * 120.17770 * 180.02562 * 3 2 1 6 6 C 1.50699 * 119.95589 * 179.97438 * 5 3 2 7 7 O 1.42895 * 109.47158 * 284.99663 * 6 5 3 8 8 Si 1.86300 * 109.46944 * 165.00183 * 6 5 3 9 9 C 1.37683 * 120.08897 * 0.27008 * 5 3 2 10 10 C 1.39753 * 119.90855 * 359.46019 * 9 5 3 11 11 C 1.47609 * 120.08977 * 180.27363 * 10 9 5 12 12 O 1.21576 * 119.99733 * 0.26810 * 11 10 9 13 13 N 1.34772 * 119.99705 * 180.26682 * 11 10 9 14 14 C 1.46504 * 119.99568 * 180.02562 * 13 11 10 15 15 C 1.52999 * 109.47287 * 179.97438 * 14 13 11 16 16 C 1.52996 * 109.47297 * 179.97438 * 15 14 13 17 17 H 1.09000 * 112.85075 * 43.80896 * 16 15 14 18 18 C 1.53788 * 113.61447 * 174.99803 * 16 15 14 19 19 C 1.53785 * 87.07711 * 139.98492 * 18 16 15 20 20 H 1.09000 * 113.61276 * 220.01623 * 19 18 16 21 21 F 1.39896 * 113.61343 * 89.20248 * 19 18 16 22 22 C 1.53779 * 113.61836 * 272.49903 * 16 15 14 23 23 C 1.37728 * 119.95675 * 180.02562 * 2 1 3 24 24 H 1.09003 * 109.46826 * 90.00644 * 1 2 3 25 25 H 1.09004 * 109.47515 * 210.00232 * 1 2 3 26 26 H 1.08996 * 109.47453 * 330.00842 * 1 2 3 27 27 H 0.96698 * 114.00329 * 270.02325 * 4 3 2 28 28 H 1.09000 * 109.47247 * 45.00116 * 6 5 3 29 29 H 0.96698 * 114.00355 * 300.00487 * 7 6 5 30 30 H 1.48506 * 110.00048 * 180.02562 * 8 6 5 31 31 H 1.48502 * 109.99996 * 301.31619 * 8 6 5 32 32 H 1.07994 * 120.04609 * 179.72297 * 9 5 3 33 33 H 0.96992 * 120.00624 * 359.97438 * 13 11 10 34 34 H 1.08998 * 109.47291 * 299.99798 * 14 13 11 35 35 H 1.09002 * 109.47212 * 60.00174 * 14 13 11 36 36 H 1.09000 * 109.47415 * 299.99940 * 15 14 13 37 37 H 1.09002 * 109.46682 * 60.00058 * 15 14 13 38 38 H 1.08995 * 113.61305 * 254.52884 * 18 16 15 39 39 H 1.08993 * 113.61158 * 25.43748 * 18 16 15 40 40 H 1.08998 * 113.61097 * 334.56913 * 22 16 15 41 41 H 1.09004 * 113.61446 * 105.46672 * 22 16 15 42 42 H 1.07998 * 120.04429 * 0.02562 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2094 -0.0005 6 6 4.3386 2.5180 -0.0011 7 8 4.2716 3.1042 -1.3026 8 14 6.1199 2.2158 0.4528 9 6 4.2860 0.0208 -0.0067 10 6 3.5919 -1.1921 -0.0010 11 6 4.3328 -2.4688 -0.0014 12 8 5.5486 -2.4660 -0.0019 13 7 3.6616 -3.6374 -0.0014 14 6 4.3970 -4.9045 -0.0013 15 6 3.4055 -6.0697 -0.0005 16 6 4.1735 -7.3930 -0.0011 17 1 5.0134 -7.3952 0.6937 18 6 3.2688 -8.6304 0.1224 19 6 4.1867 -9.3070 -0.9093 20 1 3.6502 -9.9096 -1.6422 21 9 5.2694 -9.9838 -0.3375 22 6 4.5349 -7.8950 -1.4090 23 6 2.1947 -1.1933 -0.0005 24 1 -0.3633 -0.0001 -1.0277 25 1 -0.3634 -0.8900 0.5139 26 1 -0.3634 0.8900 0.5137 27 1 1.3222 2.7176 -0.8840 28 1 3.8881 3.1941 0.7256 29 1 4.6550 2.5563 -2.0010 30 1 6.8679 3.4987 0.4564 31 1 6.2018 1.5771 1.7910 32 1 5.3659 0.0258 -0.0116 33 1 2.6916 -3.6397 -0.0006 34 1 5.0238 -4.9609 -0.8912 35 1 5.0238 -4.9608 0.8888 36 1 2.7790 -6.0132 0.8896 37 1 2.7784 -6.0137 -0.8904 38 1 3.2997 -9.0973 1.1068 39 1 2.2533 -8.4665 -0.2378 40 1 3.8655 -7.5299 -2.1878 41 1 5.5879 -7.7682 -1.6608 42 1 1.6547 -2.1286 -0.0014 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13287732.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:57 Heat of formation + Delta-G solvation = -117.448204 kcal Electronic energy + Delta-G solvation = -25095.597002 eV Core-core repulsion = 21150.175468 eV Total energy + Delta-G solvation = -3945.421535 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -48.62957 -41.72320 -40.45149 -39.48966 -37.87117 -37.54261 -36.18150 -34.07076 -32.66772 -31.14321 -28.12778 -27.10816 -26.94168 -26.27031 -24.33912 -22.98427 -22.08131 -21.48056 -20.56285 -19.60200 -18.81610 -18.09397 -17.50454 -17.27071 -16.95569 -16.68216 -16.65191 -16.30611 -16.09490 -15.91844 -15.69695 -15.45099 -14.97854 -14.77019 -14.59927 -14.47272 -14.15804 -13.92437 -13.83865 -13.67661 -13.39860 -13.23790 -13.07708 -12.86248 -12.64517 -12.33028 -12.15891 -12.00339 -11.94792 -11.66886 -11.34977 -11.25947 -10.92445 -10.47390 -10.21595 -10.03349 -9.69719 -4.98267 -0.42424 0.01795 1.26770 1.62046 1.70443 1.99961 2.00970 2.55288 3.04619 3.12699 3.17263 3.34152 3.43404 3.47297 3.48663 3.55891 3.64212 3.70928 3.89860 3.94702 4.10749 4.13095 4.26142 4.27370 4.42112 4.43254 4.48657 4.49352 4.57211 4.60526 4.63049 4.66656 4.76876 4.87030 4.93515 4.94947 4.97882 5.04235 5.04941 5.22678 5.29593 5.32923 5.48512 6.36525 6.48643 6.53876 7.12376 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.118 4.118 3 C 0.161 3.839 4 O -0.489 6.489 5 C -0.151 4.151 6 C -0.059 4.059 7 O -0.538 6.538 8 Si 0.678 3.322 9 C -0.045 4.045 10 C -0.139 4.139 11 C 0.560 3.440 12 O -0.530 6.530 13 N -0.728 5.728 14 C 0.119 3.881 15 C -0.121 4.121 16 C -0.107 4.107 17 H 0.099 0.901 18 C -0.158 4.158 19 C 0.061 3.939 20 H 0.096 0.904 21 F -0.197 7.197 22 C -0.160 4.160 23 C -0.066 4.066 24 H 0.073 0.927 25 H 0.070 0.930 26 H 0.077 0.923 27 H 0.400 0.600 28 H 0.119 0.881 29 H 0.378 0.622 30 H -0.250 1.250 31 H -0.255 1.255 32 H 0.145 0.855 33 H 0.400 0.600 34 H 0.072 0.928 35 H 0.071 0.929 36 H 0.074 0.926 37 H 0.073 0.927 38 H 0.081 0.919 39 H 0.100 0.900 40 H 0.100 0.900 41 H 0.082 0.918 42 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.353 -2.499 -3.592 6.914 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.118 4.118 3 C 0.115 3.885 4 O -0.301 6.301 5 C -0.152 4.152 6 C -0.170 4.170 7 O -0.343 6.343 8 Si 0.580 3.420 9 C -0.063 4.063 10 C -0.142 4.142 11 C 0.347 3.653 12 O -0.408 6.408 13 N -0.380 5.380 14 C -0.005 4.005 15 C -0.159 4.159 16 C -0.126 4.126 17 H 0.118 0.882 18 C -0.195 4.195 19 C 0.025 3.975 20 H 0.114 0.886 21 F -0.178 7.178 22 C -0.197 4.197 23 C -0.085 4.085 24 H 0.092 0.908 25 H 0.089 0.911 26 H 0.096 0.904 27 H 0.258 0.742 28 H 0.137 0.863 29 H 0.226 0.774 30 H -0.174 1.174 31 H -0.179 1.179 32 H 0.163 0.837 33 H 0.235 0.765 34 H 0.091 0.909 35 H 0.089 0.911 36 H 0.093 0.907 37 H 0.092 0.908 38 H 0.100 0.900 39 H 0.118 0.882 40 H 0.118 0.882 41 H 0.101 0.899 42 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -4.044 -1.934 -2.064 4.935 hybrid contribution -1.095 0.052 -0.201 1.114 sum -5.139 -1.882 -2.266 5.923 Atomic orbital electron populations 1.20737 0.89712 1.03818 1.02850 1.20217 0.97324 0.92091 1.02217 1.18313 0.88807 0.85307 0.96069 1.84658 1.75635 1.35714 1.34068 1.20656 0.93915 0.95985 1.04640 1.24935 1.09679 0.93150 0.89194 1.86512 1.84535 1.47138 1.16151 0.94824 0.76901 0.83701 0.86622 1.20956 1.00018 0.90154 0.95185 1.19824 0.93466 0.93447 1.07455 1.18124 0.87241 0.83560 0.76362 1.90817 1.13243 1.87517 1.49192 1.45908 1.10425 1.05781 1.75896 1.21421 0.94725 0.81280 1.03037 1.21780 0.97969 0.93027 1.03128 1.22510 0.99022 0.93216 0.97830 0.88234 1.23617 0.99021 0.96375 1.00519 1.22377 0.85940 0.92886 0.96325 0.88577 1.92830 1.57052 1.81531 1.86345 1.23688 1.03746 0.94764 0.97528 1.21098 0.92574 0.97796 0.97026 0.90789 0.91065 0.90412 0.74199 0.86315 0.77444 1.17444 1.17911 0.83738 0.76489 0.90921 0.91065 0.90720 0.90786 0.89979 0.88178 0.88158 0.89918 0.85028 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.28 9.78 36.00 0.35 0.63 16 2 C -0.12 0.09 5.89 -104.54 -0.62 -0.52 16 3 C 0.16 0.06 6.66 -39.02 -0.26 -0.20 16 4 O -0.49 -0.03 11.84 -18.83 -0.22 -0.25 16 5 C -0.15 -0.08 5.26 -104.54 -0.55 -0.63 16 6 C -0.06 -0.02 2.37 36.01 0.09 0.06 16 7 O -0.54 0.11 12.88 -35.23 -0.45 -0.34 16 8 Si 0.68 0.28 29.92 -169.99 -5.09 -4.81 16 9 C -0.04 -0.04 8.20 -39.22 -0.32 -0.36 16 10 C -0.14 -0.07 5.88 -104.96 -0.62 -0.69 16 11 C 0.56 0.94 7.76 -12.44 -0.10 0.85 16 12 O -0.53 -2.81 16.34 5.30 0.09 -2.72 16 13 N -0.73 1.00 5.51 -61.33 -0.34 0.66 16 14 C 0.12 -0.18 5.66 -4.04 -0.02 -0.20 16 15 C -0.12 0.45 5.17 -26.73 -0.14 0.31 16 16 C -0.11 0.27 3.63 -89.81 -0.33 -0.05 16 17 H 0.10 -0.15 8.13 -51.93 -0.42 -0.57 16 18 C -0.16 0.42 7.54 -25.91 -0.20 0.22 16 19 C 0.06 -0.08 5.69 -25.92 -0.15 -0.23 16 20 H 0.10 -0.26 8.14 -51.93 -0.42 -0.69 16 21 F -0.20 -0.44 17.39 2.25 0.04 -0.40 16 22 C -0.16 0.38 7.53 -25.92 -0.20 0.19 16 23 C -0.07 0.09 9.18 -39.22 -0.36 -0.27 16 24 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 25 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 26 H 0.08 -0.12 7.52 -51.93 -0.39 -0.51 16 27 H 0.40 -1.38 9.06 45.56 0.41 -0.96 16 28 H 0.12 0.18 7.82 -51.93 -0.41 -0.23 16 29 H 0.38 -1.50 8.70 45.56 0.40 -1.11 16 30 H -0.25 -0.79 7.11 56.52 0.40 -0.39 16 31 H -0.25 -0.87 7.11 56.52 0.40 -0.47 16 32 H 0.15 0.06 4.71 -52.49 -0.25 -0.19 16 33 H 0.40 -1.65 6.49 -40.82 -0.27 -1.91 16 34 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 35 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 36 H 0.07 -0.30 8.14 -51.93 -0.42 -0.73 16 37 H 0.07 -0.34 7.84 -51.93 -0.41 -0.75 16 38 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 39 H 0.10 -0.42 8.10 -51.93 -0.42 -0.84 16 40 H 0.10 -0.38 7.89 -51.93 -0.41 -0.79 16 41 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 42 H 0.13 -0.57 6.39 -52.49 -0.34 -0.91 16 LS Contribution 352.02 15.07 5.30 5.30 Total: 0.00 -8.70 352.02 -9.15 -17.85 By element: Atomic # 1 Polarization: -9.33 SS G_CDS: -5.07 Total: -14.40 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: -3.41 Total: -0.88 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -0.34 Total: 0.66 kcal Atomic # 8 Polarization: -2.73 SS G_CDS: -0.59 Total: -3.32 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: 0.28 SS G_CDS: -5.09 Total: -4.81 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -8.70 -9.15 -17.85 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13287732.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.603 kcal (2) G-P(sol) polarization free energy of solvation -8.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.300 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.148 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.845 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds