Wall clock time and date at job start Sun Mar 7 2021 02:33:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38974 * 119.95655 * 2 1 4 4 O 1.35708 * 119.91044 * 359.97438 * 3 2 1 5 5 C 1.39020 * 120.17770 * 180.02562 * 3 2 1 6 6 C 1.50699 * 119.95589 * 179.97438 * 5 3 2 7 7 O 1.42895 * 109.47158 * 284.99663 * 6 5 3 8 8 Si 1.86300 * 109.46944 * 165.00183 * 6 5 3 9 9 C 1.37683 * 120.08897 * 0.27008 * 5 3 2 10 10 C 1.39753 * 119.90855 * 359.46019 * 9 5 3 11 11 C 1.47609 * 120.08977 * 180.27363 * 10 9 5 12 12 O 1.21576 * 119.99733 * 0.26810 * 11 10 9 13 13 N 1.34772 * 119.99705 * 180.26682 * 11 10 9 14 14 C 1.46504 * 119.99568 * 180.02562 * 13 11 10 15 15 C 1.52999 * 109.47287 * 179.97438 * 14 13 11 16 16 C 1.52996 * 109.47297 * 179.97438 * 15 14 13 17 17 H 1.09000 * 112.85075 * 43.80896 * 16 15 14 18 18 C 1.53788 * 113.61447 * 174.99803 * 16 15 14 19 19 C 1.53785 * 87.07711 * 139.98492 * 18 16 15 20 20 H 1.09000 * 113.61276 * 220.01623 * 19 18 16 21 21 F 1.39896 * 113.61343 * 89.20248 * 19 18 16 22 22 C 1.53779 * 113.61836 * 272.49903 * 16 15 14 23 23 C 1.37728 * 119.95675 * 180.02562 * 2 1 3 24 24 H 1.09003 * 109.46826 * 90.00644 * 1 2 3 25 25 H 1.09004 * 109.47515 * 210.00232 * 1 2 3 26 26 H 1.08996 * 109.47453 * 330.00842 * 1 2 3 27 27 H 0.96698 * 114.00329 * 270.02325 * 4 3 2 28 28 H 1.09000 * 109.47247 * 45.00116 * 6 5 3 29 29 H 0.96698 * 114.00355 * 300.00487 * 7 6 5 30 30 H 1.48506 * 110.00048 * 180.02562 * 8 6 5 31 31 H 1.48502 * 109.99996 * 301.31619 * 8 6 5 32 32 H 1.07994 * 120.04609 * 179.72297 * 9 5 3 33 33 H 0.96992 * 120.00624 * 359.97438 * 13 11 10 34 34 H 1.08998 * 109.47291 * 299.99798 * 14 13 11 35 35 H 1.09002 * 109.47212 * 60.00174 * 14 13 11 36 36 H 1.09000 * 109.47415 * 299.99940 * 15 14 13 37 37 H 1.09002 * 109.46682 * 60.00058 * 15 14 13 38 38 H 1.08995 * 113.61305 * 254.52884 * 18 16 15 39 39 H 1.08993 * 113.61158 * 25.43748 * 18 16 15 40 40 H 1.08998 * 113.61097 * 334.56913 * 22 16 15 41 41 H 1.09004 * 113.61446 * 105.46672 * 22 16 15 42 42 H 1.07998 * 120.04429 * 0.02562 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2094 -0.0005 6 6 4.3386 2.5180 -0.0011 7 8 4.2716 3.1042 -1.3026 8 14 6.1199 2.2158 0.4528 9 6 4.2860 0.0208 -0.0067 10 6 3.5919 -1.1921 -0.0010 11 6 4.3328 -2.4688 -0.0014 12 8 5.5486 -2.4660 -0.0019 13 7 3.6616 -3.6374 -0.0014 14 6 4.3970 -4.9045 -0.0013 15 6 3.4055 -6.0697 -0.0005 16 6 4.1735 -7.3930 -0.0011 17 1 5.0134 -7.3952 0.6937 18 6 3.2688 -8.6304 0.1224 19 6 4.1867 -9.3070 -0.9093 20 1 3.6502 -9.9096 -1.6422 21 9 5.2694 -9.9838 -0.3375 22 6 4.5349 -7.8950 -1.4090 23 6 2.1947 -1.1933 -0.0005 24 1 -0.3633 -0.0001 -1.0277 25 1 -0.3634 -0.8900 0.5139 26 1 -0.3634 0.8900 0.5137 27 1 1.3222 2.7176 -0.8840 28 1 3.8881 3.1941 0.7256 29 1 4.6550 2.5563 -2.0010 30 1 6.8679 3.4987 0.4564 31 1 6.2018 1.5771 1.7910 32 1 5.3659 0.0258 -0.0116 33 1 2.6916 -3.6397 -0.0006 34 1 5.0238 -4.9609 -0.8912 35 1 5.0238 -4.9608 0.8888 36 1 2.7790 -6.0132 0.8896 37 1 2.7784 -6.0137 -0.8904 38 1 3.2997 -9.0973 1.1068 39 1 2.2533 -8.4665 -0.2378 40 1 3.8655 -7.5299 -2.1878 41 1 5.5879 -7.7682 -1.6608 42 1 1.6547 -2.1286 -0.0014 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_13287732.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:57 Heat of formation + Delta-G solvation = -118.274071 kcal Electronic energy + Delta-G solvation = -25095.632815 eV Core-core repulsion = 21150.175468 eV Total energy + Delta-G solvation = -3945.457347 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -48.65521 -41.71090 -40.46599 -39.34057 -37.85266 -37.51327 -36.19681 -33.98872 -32.60991 -31.03892 -27.98702 -27.03662 -26.79527 -26.18771 -24.29394 -22.83736 -22.01739 -21.48841 -20.39928 -19.55503 -18.79671 -18.08537 -17.44904 -17.18217 -16.86464 -16.62838 -16.58706 -16.32714 -16.11849 -15.91687 -15.68217 -15.42118 -14.99307 -14.69511 -14.54128 -14.36685 -14.17735 -13.87934 -13.78050 -13.46042 -13.30499 -13.08176 -12.92956 -12.77170 -12.51435 -12.34822 -12.24445 -11.94503 -11.78459 -11.62446 -11.26276 -11.14932 -10.90009 -10.50665 -10.24451 -9.96736 -9.64944 -5.08100 -0.40526 0.07097 1.19144 1.52091 1.62838 1.84909 2.04811 2.56179 3.13525 3.30871 3.37375 3.38605 3.53097 3.57883 3.63566 3.71087 3.76068 3.89514 4.02441 4.13426 4.17757 4.28136 4.36844 4.44525 4.47104 4.62148 4.63496 4.72235 4.76093 4.77620 4.81643 4.85864 4.95024 5.03864 5.05540 5.07636 5.15722 5.20371 5.21582 5.32434 5.36330 5.52258 5.59502 6.44506 6.68204 6.71732 7.11757 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.121 4.121 3 C 0.153 3.847 4 O -0.500 6.500 5 C -0.159 4.159 6 C -0.050 4.050 7 O -0.546 6.546 8 Si 0.746 3.254 9 C -0.057 4.057 10 C -0.151 4.151 11 C 0.556 3.444 12 O -0.577 6.577 13 N -0.711 5.711 14 C 0.118 3.882 15 C -0.108 4.108 16 C -0.109 4.109 17 H 0.080 0.920 18 C -0.148 4.148 19 C 0.042 3.958 20 H 0.112 0.888 21 F -0.223 7.223 22 C -0.156 4.156 23 C -0.054 4.054 24 H 0.087 0.913 25 H 0.086 0.914 26 H 0.067 0.933 27 H 0.413 0.587 28 H 0.108 0.892 29 H 0.395 0.605 30 H -0.286 1.286 31 H -0.298 1.298 32 H 0.141 0.859 33 H 0.416 0.584 34 H 0.062 0.938 35 H 0.053 0.947 36 H 0.086 0.914 37 H 0.095 0.905 38 H 0.072 0.928 39 H 0.124 0.876 40 H 0.122 0.878 41 H 0.067 0.933 42 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.906 -3.072 -4.511 9.606 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.122 4.122 3 C 0.107 3.893 4 O -0.314 6.314 5 C -0.160 4.160 6 C -0.161 4.161 7 O -0.354 6.354 8 Si 0.653 3.347 9 C -0.075 4.075 10 C -0.154 4.154 11 C 0.344 3.656 12 O -0.458 6.458 13 N -0.363 5.363 14 C -0.005 4.005 15 C -0.145 4.145 16 C -0.128 4.128 17 H 0.099 0.901 18 C -0.186 4.186 19 C 0.006 3.994 20 H 0.130 0.870 21 F -0.204 7.204 22 C -0.193 4.193 23 C -0.072 4.072 24 H 0.105 0.895 25 H 0.105 0.895 26 H 0.086 0.914 27 H 0.274 0.726 28 H 0.125 0.875 29 H 0.245 0.755 30 H -0.213 1.213 31 H -0.226 1.226 32 H 0.158 0.842 33 H 0.254 0.746 34 H 0.080 0.920 35 H 0.071 0.929 36 H 0.104 0.896 37 H 0.113 0.887 38 H 0.091 0.909 39 H 0.142 0.858 40 H 0.140 0.860 41 H 0.086 0.914 42 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -6.643 -2.529 -3.019 7.722 hybrid contribution -0.300 0.232 0.096 0.392 sum -6.943 -2.297 -2.923 7.876 Atomic orbital electron populations 1.20769 0.88239 1.04070 1.03765 1.20454 0.98360 0.91712 1.01625 1.18495 0.88772 0.85955 0.96044 1.84623 1.75522 1.35808 1.35425 1.20606 0.94268 0.95622 1.05479 1.24747 1.08896 0.93017 0.89479 1.86470 1.84783 1.47837 1.16278 0.94027 0.76012 0.80482 0.84203 1.21003 1.00006 0.90697 0.95824 1.19828 0.94382 0.92651 1.08510 1.18377 0.86802 0.84601 0.75793 1.90793 1.15212 1.88162 1.51618 1.45793 1.11237 1.04975 1.74315 1.21414 0.95301 0.82074 1.01721 1.21700 0.97263 0.90901 1.04675 1.22467 0.98805 0.94165 0.97391 0.90120 1.23620 0.99816 0.95466 0.99699 1.22750 0.85705 0.93571 0.97345 0.87006 1.92774 1.58529 1.82193 1.86862 1.23723 1.03407 0.94076 0.98136 1.21385 0.91639 0.99048 0.95165 0.89469 0.89550 0.91421 0.72623 0.87480 0.75475 1.21346 1.22576 0.84217 0.74570 0.91989 0.92864 0.89590 0.88669 0.90914 0.85773 0.86011 0.91393 0.81736 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.79 9.78 71.23 0.70 1.48 16 2 C -0.12 0.36 5.89 -19.81 -0.12 0.24 16 3 C 0.15 0.06 6.66 22.63 0.15 0.21 16 4 O -0.50 0.09 11.84 -90.29 -1.07 -0.98 16 5 C -0.16 -0.25 5.26 -19.81 -0.10 -0.35 16 6 C -0.05 -0.08 2.37 71.24 0.17 0.09 16 7 O -0.55 0.17 12.88 -148.98 -1.92 -1.75 16 8 Si 0.75 2.03 29.92 68.60 2.05 4.08 16 9 C -0.06 -0.14 8.20 22.51 0.18 0.04 16 10 C -0.15 -0.14 5.88 -20.08 -0.12 -0.25 16 11 C 0.56 2.08 7.76 86.72 0.67 2.76 16 12 O -0.58 -7.14 16.34 -3.96 -0.06 -7.21 16 13 N -0.71 2.56 5.51 -466.21 -2.57 -0.01 16 14 C 0.12 -0.35 5.66 86.38 0.49 0.14 16 15 C -0.11 0.97 5.17 30.59 0.16 1.13 16 16 C -0.11 0.59 3.63 -10.27 -0.04 0.55 16 17 H 0.08 -0.13 8.13 -2.39 -0.02 -0.15 16 18 C -0.15 0.93 7.54 31.12 0.23 1.17 16 19 C 0.04 -0.12 5.69 31.12 0.18 0.06 16 20 H 0.11 -0.71 8.14 -2.39 -0.02 -0.73 16 21 F -0.22 -1.28 17.39 44.97 0.78 -0.49 16 22 C -0.16 0.81 7.53 31.12 0.23 1.04 16 23 C -0.05 0.25 9.18 22.51 0.21 0.45 16 24 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 25 H 0.09 -0.85 8.08 -2.39 -0.02 -0.87 16 26 H 0.07 -0.30 7.52 -2.39 -0.02 -0.31 16 27 H 0.41 -3.04 9.06 -74.06 -0.67 -3.71 16 28 H 0.11 0.44 7.82 -2.39 -0.02 0.42 16 29 H 0.40 -3.22 8.70 -74.06 -0.64 -3.86 16 30 H -0.29 -2.46 7.11 99.48 0.71 -1.75 16 31 H -0.30 -2.94 7.11 99.48 0.71 -2.23 16 32 H 0.14 0.38 4.71 -2.91 -0.01 0.36 16 33 H 0.42 -4.43 6.49 -92.71 -0.60 -5.03 16 34 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 35 H 0.05 0.05 8.14 -2.39 -0.02 0.03 16 36 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 37 H 0.09 -1.20 7.84 -2.39 -0.02 -1.21 16 38 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 39 H 0.12 -1.37 8.10 -2.39 -0.02 -1.39 16 40 H 0.12 -1.17 7.89 -2.39 -0.02 -1.19 16 41 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 42 H 0.17 -1.99 6.39 -2.91 -0.02 -2.01 16 Total: 0.00 -22.91 352.02 -0.59 -23.50 By element: Atomic # 1 Polarization: -25.11 SS G_CDS: -0.80 Total: -25.91 kcal Atomic # 6 Polarization: 5.77 SS G_CDS: 3.00 Total: 8.77 kcal Atomic # 7 Polarization: 2.56 SS G_CDS: -2.57 Total: -0.01 kcal Atomic # 8 Polarization: -6.88 SS G_CDS: -3.05 Total: -9.93 kcal Atomic # 9 Polarization: -1.28 SS G_CDS: 0.78 Total: -0.49 kcal Atomic # 14 Polarization: 2.03 SS G_CDS: 2.05 Total: 4.08 kcal Total: -22.91 -0.59 -23.50 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13287732.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.773 kcal (2) G-P(sol) polarization free energy of solvation -22.910 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.683 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.591 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.274 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds