Wall clock time and date at job start Sun Mar 7 2021 02:34:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86300 * 109.47370 * 2 1 4 4 C 1.50703 * 109.47021 * 120.00007 * 2 1 3 5 5 C 1.34845 * 125.90299 * 218.20106 * 4 2 1 6 6 C 1.40937 * 107.47196 * 179.97438 * 5 4 2 7 7 C 1.34849 * 107.46379 * 359.75475 * 6 5 4 8 8 N 1.36565 * 108.20504 * 0.39237 * 7 6 5 9 9 C 1.40191 * 125.67227 * 179.86568 * 8 7 6 10 10 C 1.38835 * 120.06570 * 56.07550 * 9 8 7 11 11 C 1.38117 * 119.93385 * 179.97438 * 10 9 8 12 12 C 1.38276 * 120.06841 * 0.02562 * 11 10 9 13 13 C 1.50700 * 119.93553 * 179.97438 * 12 11 10 14 14 C 1.50709 * 109.47006 * 89.99872 * 13 12 11 15 15 O 1.21276 * 119.99985 * 0.02562 * 14 13 12 16 16 N 1.34772 * 119.99650 * 180.27664 * 14 13 12 17 17 C 1.46499 * 119.99650 * 179.72495 * 16 14 13 18 18 C 1.53008 * 109.47076 * 179.97438 * 17 16 14 19 19 C 1.52999 * 109.47105 * 180.02562 * 18 17 16 20 20 H 1.09000 * 112.85070 * 316.19214 * 19 18 17 21 21 C 1.53774 * 113.61428 * 87.50619 * 19 18 17 22 22 C 1.53782 * 87.08282 * 139.98139 * 21 19 18 23 23 H 1.08998 * 113.68982 * 220.00790 * 22 21 19 24 24 F 1.39901 * 113.61603 * 89.11149 * 22 21 19 25 25 C 1.53785 * 113.61111 * 185.00417 * 19 18 17 26 26 C 1.38280 * 120.13088 * 0.27182 * 12 11 10 27 27 C 1.38129 * 120.06131 * 359.45047 * 26 12 11 28 28 H 0.96695 * 113.99433 * 305.22471 * 1 2 3 29 29 H 1.09004 * 109.46892 * 239.99773 * 2 1 3 30 30 H 1.48504 * 109.99834 * 299.99844 * 3 2 1 31 31 H 1.48498 * 110.00021 * 61.32066 * 3 2 1 32 32 H 1.08007 * 126.26301 * 359.97438 * 5 4 2 33 33 H 1.08002 * 126.26772 * 180.02562 * 6 5 4 34 34 H 1.08004 * 125.89817 * 180.24354 * 7 6 5 35 35 H 1.07995 * 120.03049 * 0.02562 * 10 9 8 36 36 H 1.08007 * 119.96770 * 179.97438 * 11 10 9 37 37 H 1.08999 * 109.46994 * 329.99967 * 13 12 11 38 38 H 1.08997 * 109.47316 * 209.99916 * 13 12 11 39 39 H 0.97001 * 120.00545 * 359.72319 * 16 14 13 40 40 H 1.08994 * 109.47100 * 299.99532 * 17 16 14 41 41 H 1.09003 * 109.47169 * 60.00449 * 17 16 14 42 42 H 1.09000 * 109.47244 * 300.00214 * 18 17 16 43 43 H 1.09000 * 109.46994 * 59.99718 * 18 17 16 44 44 H 1.09002 * 113.61241 * 254.52859 * 21 19 18 45 45 H 1.08996 * 113.61826 * 25.42809 * 21 19 18 46 46 H 1.08997 * 113.61627 * 334.56073 * 25 19 18 47 47 H 1.08997 * 113.61446 * 105.38759 * 25 19 18 48 48 H 1.08003 * 119.96772 * 179.70686 * 26 12 11 49 49 H 1.07998 * 120.02445 * 180.27239 * 27 26 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 3.0042 -0.3552 1.9661 6 6 3.1194 -1.2821 3.0215 7 6 2.1094 -2.1667 2.8952 8 7 1.3782 -1.8250 1.7936 9 6 0.2447 -2.5021 1.3224 10 6 -0.8463 -2.6975 2.1585 11 6 -1.9619 -3.3645 1.6913 12 6 -1.9926 -3.8381 0.3925 13 6 -3.2111 -4.5659 -0.1139 14 6 -4.1725 -3.5756 -0.7190 15 8 -3.8952 -2.3951 -0.7377 16 7 -5.3426 -4.0013 -1.2349 17 6 -6.2797 -3.0378 -1.8177 18 6 -7.5191 -3.7763 -2.3275 19 6 -8.4976 -2.7702 -2.9368 20 1 -8.6127 -1.8715 -2.3308 21 6 -8.2387 -2.4829 -4.4251 22 6 -9.7652 -2.4889 -4.6109 23 1 -10.0928 -2.9782 -5.5282 24 9 -10.3577 -1.2357 -4.4221 25 6 -9.8337 -3.3958 -3.3708 26 6 -0.9051 -3.6504 -0.4406 27 6 0.2111 -2.9790 0.0191 28 1 -0.3932 0.5095 0.7216 29 1 1.7924 -0.5139 -0.8900 30 1 1.5616 2.4678 -1.2086 31 1 1.5881 2.4585 1.2242 32 1 3.6560 0.4859 1.7805 33 1 3.8753 -1.2813 3.7929 34 1 1.9141 -3.0026 3.5506 35 1 -0.8230 -2.3275 3.1728 36 1 -2.8108 -3.5172 2.3414 37 1 -3.6956 -5.0832 0.7142 38 1 -2.9126 -5.2914 -0.8706 39 1 -5.5642 -4.9455 -1.2204 40 1 -6.5747 -2.3132 -1.0589 41 1 -5.7990 -2.5198 -2.6476 42 1 -7.2238 -4.5007 -3.0865 43 1 -7.9999 -4.2947 -1.4980 44 1 -7.7803 -1.5112 -4.6089 45 1 -7.7323 -3.2961 -4.9451 46 1 -9.7634 -4.4585 -3.6026 47 1 -10.6626 -3.1622 -2.7027 48 1 -0.9301 -4.0255 -1.4531 49 1 1.0584 -2.8289 -0.6335 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13287746.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:01 Heat of formation + Delta-G solvation = -14.642367 kcal Electronic energy + Delta-G solvation = -30887.810180 eV Core-core repulsion = 26504.349262 eV Total energy + Delta-G solvation = -4383.460917 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -48.63200 -42.56900 -41.00446 -39.80439 -39.32097 -37.66661 -36.08165 -34.79461 -32.43414 -32.08496 -31.30312 -30.92318 -27.98530 -27.01474 -25.94843 -25.76728 -23.90019 -23.37637 -22.83459 -21.51617 -21.30409 -20.56611 -20.50850 -19.17445 -18.15950 -17.55593 -17.33571 -17.17868 -17.11094 -16.81299 -16.56777 -16.23884 -15.96997 -15.86596 -15.73903 -15.46148 -15.16428 -14.94664 -14.61813 -14.52124 -14.43084 -14.30964 -14.02217 -13.85970 -13.75817 -13.68643 -13.30975 -13.25360 -13.12058 -13.02461 -12.66301 -12.57191 -12.17997 -12.15128 -12.05485 -11.93886 -11.72377 -11.34835 -11.23798 -10.87305 -10.76895 -10.14192 -10.11727 -9.92358 -9.13406 -8.95077 -4.86951 0.08316 0.41794 1.15046 1.46960 1.66153 1.73328 1.92532 2.10254 2.11161 2.21707 2.75825 3.12789 3.17470 3.38397 3.43732 3.53566 3.56348 3.70946 3.74929 3.78491 3.83879 3.94185 4.01268 4.11783 4.15966 4.21942 4.27713 4.29954 4.41034 4.42846 4.48374 4.52940 4.57896 4.62186 4.64283 4.66659 4.69445 4.77420 4.87163 4.88328 4.95859 4.99859 5.00460 5.25939 5.29172 5.32623 5.35089 5.37089 5.46216 5.53469 5.82662 6.04296 6.29202 6.43056 6.49583 6.62004 7.22731 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.522 6.522 2 C -0.054 4.054 3 Si 0.709 3.291 4 C -0.010 4.010 5 C -0.187 4.187 6 C -0.190 4.190 7 C -0.007 4.007 8 N -0.392 5.392 9 C 0.130 3.870 10 C -0.116 4.116 11 C -0.091 4.091 12 C -0.063 4.063 13 C -0.103 4.103 14 C 0.511 3.489 15 O -0.523 6.523 16 N -0.735 5.735 17 C 0.119 3.881 18 C -0.120 4.120 19 C -0.107 4.107 20 H 0.099 0.901 21 C -0.160 4.160 22 C 0.061 3.939 23 H 0.097 0.903 24 F -0.197 7.197 25 C -0.157 4.157 26 C -0.089 4.089 27 C -0.093 4.093 28 H 0.373 0.627 29 H 0.115 0.885 30 H -0.256 1.256 31 H -0.257 1.257 32 H 0.147 0.853 33 H 0.142 0.858 34 H 0.163 0.837 35 H 0.127 0.873 36 H 0.127 0.873 37 H 0.105 0.895 38 H 0.105 0.895 39 H 0.401 0.599 40 H 0.068 0.932 41 H 0.068 0.932 42 H 0.073 0.927 43 H 0.074 0.926 44 H 0.081 0.919 45 H 0.100 0.900 46 H 0.100 0.900 47 H 0.081 0.919 48 H 0.127 0.873 49 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.329 -6.436 -0.369 6.455 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.163 4.163 3 Si 0.608 3.392 4 C -0.120 4.120 5 C -0.211 4.211 6 C -0.214 4.214 7 C -0.134 4.134 8 N -0.065 5.065 9 C 0.041 3.959 10 C -0.135 4.135 11 C -0.110 4.110 12 C -0.063 4.063 13 C -0.143 4.143 14 C 0.297 3.703 15 O -0.398 6.398 16 N -0.388 5.388 17 C -0.004 4.004 18 C -0.158 4.158 19 C -0.126 4.126 20 H 0.117 0.883 21 C -0.198 4.198 22 C 0.025 3.975 23 H 0.115 0.885 24 F -0.178 7.178 25 C -0.195 4.195 26 C -0.107 4.107 27 C -0.112 4.112 28 H 0.220 0.780 29 H 0.132 0.868 30 H -0.181 1.181 31 H -0.182 1.182 32 H 0.165 0.835 33 H 0.160 0.840 34 H 0.180 0.820 35 H 0.145 0.855 36 H 0.145 0.855 37 H 0.124 0.876 38 H 0.124 0.876 39 H 0.235 0.765 40 H 0.086 0.914 41 H 0.087 0.913 42 H 0.092 0.908 43 H 0.092 0.908 44 H 0.100 0.900 45 H 0.118 0.882 46 H 0.118 0.882 47 H 0.100 0.900 48 H 0.145 0.855 49 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -0.539 -5.205 -1.016 5.330 hybrid contribution -1.236 -0.626 0.607 1.513 sum -1.776 -5.831 -0.409 6.109 Atomic orbital electron populations 1.86673 1.17158 1.74537 1.54316 1.24757 0.84315 1.10948 0.96306 0.94645 0.91440 0.72719 0.80391 1.21039 0.98841 0.91847 1.00237 1.20678 0.99481 1.03011 0.97923 1.20922 1.01067 0.97699 1.01710 1.21999 0.95667 1.03257 0.92524 1.41429 1.21266 1.21403 1.22389 1.17600 0.86585 0.97607 0.94132 1.20997 0.92122 1.00345 1.00020 1.20797 0.97441 0.97449 0.95289 1.19274 0.94229 0.98884 0.93958 1.20687 0.93614 0.97534 1.02454 1.20564 0.81820 0.89781 0.78141 1.90788 1.75483 1.17619 1.55929 1.46029 1.19222 1.11318 1.62258 1.21362 0.88991 0.91805 0.98284 1.21769 0.94719 0.98128 1.01158 1.22513 0.94883 0.99224 0.96012 0.88314 1.23687 0.95359 1.04052 0.96662 1.22384 0.94217 0.81058 0.99852 0.88540 1.92831 1.85072 1.43275 1.96589 1.23616 0.98447 1.00139 0.97311 1.20815 0.92394 0.98308 0.99233 1.20904 0.98957 0.97048 0.94318 0.77968 0.86767 1.18116 1.18156 0.83534 0.83999 0.81953 0.85522 0.85488 0.87644 0.87639 0.76534 0.91409 0.91329 0.90840 0.90754 0.89981 0.88173 0.88168 0.89979 0.85518 0.85733 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -1.92 11.01 -35.23 -0.39 -2.31 16 2 C -0.05 -0.09 2.49 36.01 0.09 0.00 16 3 Si 0.71 0.28 30.80 -169.99 -5.24 -4.95 16 4 C -0.01 -0.03 6.12 -81.68 -0.50 -0.53 16 5 C -0.19 -0.35 9.39 -39.76 -0.37 -0.72 16 6 C -0.19 -0.37 10.86 -39.76 -0.43 -0.80 16 7 C -0.01 -0.01 11.21 -16.65 -0.19 -0.20 16 8 N -0.39 -1.18 2.84 -56.74 -0.16 -1.35 16 9 C 0.13 0.38 4.66 -83.60 -0.39 -0.01 16 10 C -0.12 -0.24 9.77 -39.40 -0.38 -0.63 16 11 C -0.09 -0.12 9.69 -39.61 -0.38 -0.50 16 12 C -0.06 -0.07 4.38 -104.59 -0.46 -0.53 16 13 C -0.10 0.18 5.83 -29.03 -0.17 0.01 16 14 C 0.51 0.57 7.82 -10.98 -0.09 0.48 16 15 O -0.52 -3.20 16.03 5.56 0.09 -3.11 16 16 N -0.74 1.19 5.56 -60.29 -0.33 0.86 16 17 C 0.12 -0.11 5.67 -4.04 -0.02 -0.13 16 18 C -0.12 0.39 5.17 -26.73 -0.14 0.25 16 19 C -0.11 0.21 3.63 -89.81 -0.33 -0.11 16 20 H 0.10 -0.08 8.13 -51.93 -0.42 -0.51 16 21 C -0.16 0.28 7.53 -25.92 -0.20 0.09 16 22 C 0.06 -0.05 5.69 -25.91 -0.15 -0.20 16 23 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 24 F -0.20 -0.53 17.38 2.25 0.04 -0.49 16 25 C -0.16 0.35 7.54 -25.91 -0.20 0.16 16 26 C -0.09 -0.15 9.69 -39.61 -0.38 -0.53 16 27 C -0.09 -0.25 8.62 -39.41 -0.34 -0.59 16 28 H 0.37 0.75 8.60 45.56 0.39 1.14 16 29 H 0.11 0.11 7.96 -51.93 -0.41 -0.30 16 30 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 31 H -0.26 -0.75 7.11 56.52 0.40 -0.35 16 32 H 0.15 -0.08 6.59 -52.48 -0.35 -0.43 16 33 H 0.14 0.02 8.06 -52.49 -0.42 -0.40 16 34 H 0.16 0.02 8.06 -52.48 -0.42 -0.40 16 35 H 0.13 0.14 8.06 -52.49 -0.42 -0.28 16 36 H 0.13 -0.06 8.06 -52.48 -0.42 -0.49 16 37 H 0.11 -0.42 8.08 -51.93 -0.42 -0.84 16 38 H 0.11 -0.41 8.08 -51.93 -0.42 -0.83 16 39 H 0.40 -1.89 8.47 -40.82 -0.35 -2.24 16 40 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 41 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 42 H 0.07 -0.30 7.84 -51.93 -0.41 -0.71 16 43 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 44 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 45 H 0.10 -0.32 7.89 -51.93 -0.41 -0.73 16 46 H 0.10 -0.38 8.10 -51.93 -0.42 -0.80 16 47 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 48 H 0.13 0.00 8.06 -52.48 -0.42 -0.42 16 49 H 0.12 0.28 8.06 -52.49 -0.42 -0.14 16 LS Contribution 410.54 15.07 6.19 6.19 Total: 0.00 -9.69 410.54 -12.31 -22.00 By element: Atomic # 1 Polarization: -4.85 SS G_CDS: -7.48 Total: -12.33 kcal Atomic # 6 Polarization: 0.52 SS G_CDS: -5.02 Total: -4.50 kcal Atomic # 7 Polarization: 0.01 SS G_CDS: -0.50 Total: -0.49 kcal Atomic # 8 Polarization: -5.12 SS G_CDS: -0.30 Total: -5.42 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.04 Total: -0.49 kcal Atomic # 14 Polarization: 0.28 SS G_CDS: -5.24 Total: -4.95 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -9.69 -12.31 -22.00 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13287746.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.356 kcal (2) G-P(sol) polarization free energy of solvation -9.689 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.333 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.310 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.998 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.642 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds