Wall clock time and date at job start Sun Mar 7 2021 02:34:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38315 * 120.34779 * 119.99654 * 4 2 1 6 6 N 1.31958 * 121.08030 * 179.97438 * 5 4 2 7 7 C 1.31661 * 121.88083 * 359.97438 * 6 5 4 8 8 C 1.39563 * 120.56793 * 0.02562 * 7 6 5 9 9 C 1.47837 * 120.56236 * 179.97438 * 8 7 6 10 10 O 1.21554 * 119.99969 * 179.97438 * 9 8 7 11 11 N 1.34779 * 120.00055 * 0.02562 * 9 8 7 12 12 C 1.46499 * 119.99973 * 179.97438 * 11 9 8 13 13 C 1.53004 * 109.46965 * 179.97438 * 12 11 9 14 14 C 1.53001 * 109.46913 * 180.02562 * 13 12 11 15 15 H 1.08995 * 112.85215 * 45.33916 * 14 13 12 16 16 C 1.53783 * 113.61300 * 176.53363 * 14 13 12 17 17 C 1.53782 * 87.08242 * 139.97971 * 16 14 13 18 18 H 1.09003 * 113.61253 * 219.93814 * 17 16 14 19 19 F 1.39896 * 113.61379 * 89.11609 * 17 16 14 20 20 C 1.53781 * 113.61197 * 274.13853 * 14 13 12 21 21 C 1.38395 * 120.34893 * 299.72522 * 4 2 1 22 22 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 23 23 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 24 24 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 25 25 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 26 26 H 1.08003 * 119.45808 * 0.02562 * 5 4 2 27 27 H 1.07998 * 119.71992 * 180.02562 * 7 6 5 28 28 H 0.97003 * 119.99481 * 359.97438 * 11 9 8 29 29 H 1.08997 * 109.47688 * 300.00223 * 12 11 9 30 30 H 1.09008 * 109.47001 * 60.00424 * 12 11 9 31 31 H 1.09001 * 109.47286 * 300.00297 * 13 12 11 32 32 H 1.08998 * 109.46708 * 60.00583 * 13 12 11 33 33 H 1.08996 * 113.61596 * 254.53105 * 16 14 13 34 34 H 1.09007 * 113.61471 * 25.43143 * 16 14 13 35 35 H 1.09004 * 113.61787 * 334.56717 * 20 14 13 36 36 H 1.08998 * 113.61298 * 105.47324 * 20 14 13 37 37 H 1.08000 * 120.85614 * 359.97438 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7268 -0.0450 -2.1457 6 7 3.1749 -0.6530 -3.2277 7 6 2.8895 -1.9120 -3.4865 8 6 2.0926 -2.6532 -2.6128 9 6 1.7718 -4.0667 -2.9038 10 8 1.0771 -4.7028 -2.1355 11 7 2.2503 -4.6503 -4.0205 12 6 1.9328 -6.0511 -4.3085 13 6 2.5937 -6.4634 -5.6254 14 6 2.2616 -7.9263 -5.9266 15 1 1.2087 -8.1618 -5.7718 16 6 2.8106 -8.4173 -7.2765 17 6 3.1574 -9.7366 -6.5665 18 1 4.1165 -10.1565 -6.8696 19 9 2.1208 -10.6757 -6.5915 20 6 3.2211 -8.9258 -5.2592 21 6 1.6060 -2.0368 -1.4539 22 1 -0.3934 0.4418 -0.7650 23 1 1.7923 -0.5138 0.8899 24 1 1.5616 2.4678 1.2086 25 1 3.5346 1.7703 -0.0322 26 1 2.9861 0.9889 -1.9714 27 1 3.2754 -2.3752 -4.3826 28 1 2.8050 -4.1426 -4.6334 29 1 2.3057 -6.6816 -3.5014 30 1 0.8524 -6.1690 -4.3922 31 1 2.2204 -5.8329 -6.4324 32 1 3.6741 -6.3455 -5.5422 33 1 2.0462 -8.5235 -8.0462 34 1 3.6845 -7.8635 -7.6200 35 1 4.2073 -8.5113 -5.0502 36 1 2.7875 -9.4419 -4.4027 37 1 0.9905 -2.5818 -0.7535 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13287814.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:05 Heat of formation + Delta-G solvation = -57.811511 kcal Electronic energy + Delta-G solvation = -20966.436229 eV Core-core repulsion = 17432.394635 eV Total energy + Delta-G solvation = -3534.041594 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.121 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -48.63097 -41.92090 -40.38501 -39.45571 -38.00627 -36.23878 -33.78214 -33.50270 -31.63397 -27.37805 -27.09785 -26.74875 -24.93862 -23.85959 -22.99054 -21.67080 -20.58110 -19.30407 -18.26279 -17.99233 -17.73877 -17.31312 -16.97881 -16.81128 -16.45020 -16.37415 -15.98626 -15.81218 -15.54009 -15.00598 -14.81019 -14.44643 -14.41495 -14.25175 -13.85504 -13.68251 -13.55651 -13.23090 -12.78495 -12.69761 -12.17511 -12.15153 -11.96746 -11.44856 -11.34463 -11.13888 -11.07712 -10.67816 -10.59261 -10.38075 -10.18522 -5.18263 -0.61394 -0.05877 1.09836 1.48385 1.69799 1.83209 1.93204 2.60393 2.97622 3.12039 3.16588 3.26469 3.34314 3.42656 3.51462 3.56590 3.65529 3.70273 3.71014 3.93161 4.05313 4.09008 4.17130 4.25686 4.38424 4.41042 4.48512 4.60318 4.64263 4.74487 4.80722 4.85972 4.87008 4.93510 4.98264 5.20330 5.28829 5.32364 6.27324 6.40613 6.58264 7.02957 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.065 4.065 3 Si 0.689 3.311 4 C -0.179 4.179 5 C 0.127 3.873 6 N -0.478 5.478 7 C 0.139 3.861 8 C -0.188 4.188 9 C 0.563 3.437 10 O -0.527 6.527 11 N -0.726 5.726 12 C 0.119 3.881 13 C -0.122 4.122 14 C -0.107 4.107 15 H 0.099 0.901 16 C -0.157 4.157 17 C 0.061 3.939 18 H 0.097 0.903 19 F -0.197 7.197 20 C -0.160 4.160 21 C 0.011 3.989 22 H 0.381 0.619 23 H 0.120 0.880 24 H -0.248 1.248 25 H -0.253 1.253 26 H 0.163 0.837 27 H 0.161 0.839 28 H 0.400 0.600 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.075 0.925 32 H 0.074 0.926 33 H 0.082 0.918 34 H 0.100 0.900 35 H 0.100 0.900 36 H 0.082 0.918 37 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.707 3.012 -4.267 5.883 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.590 3.410 4 C -0.181 4.181 5 C -0.029 4.029 6 N -0.185 5.185 7 C -0.020 4.020 8 C -0.193 4.193 9 C 0.349 3.651 10 O -0.404 6.404 11 N -0.378 5.378 12 C -0.004 4.004 13 C -0.159 4.159 14 C -0.126 4.126 15 H 0.118 0.882 16 C -0.195 4.195 17 C 0.025 3.975 18 H 0.115 0.885 19 F -0.178 7.178 20 C -0.198 4.198 21 C -0.015 4.015 22 H 0.228 0.772 23 H 0.138 0.862 24 H -0.173 1.173 25 H -0.178 1.178 26 H 0.180 0.820 27 H 0.178 0.822 28 H 0.236 0.764 29 H 0.091 0.909 30 H 0.090 0.910 31 H 0.094 0.906 32 H 0.093 0.907 33 H 0.101 0.899 34 H 0.119 0.881 35 H 0.118 0.882 36 H 0.101 0.899 37 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 3.269 3.255 -3.321 5.684 hybrid contribution -0.189 -0.972 0.390 1.064 sum 3.080 2.283 -2.932 4.826 Atomic orbital electron populations 1.86549 1.16619 1.81637 1.49294 1.25034 0.85619 1.10326 0.96625 0.94810 0.81056 0.77175 0.87943 1.21445 1.01428 0.95771 0.99481 1.22901 0.91594 0.99688 0.88685 1.67721 1.21460 1.10187 1.19133 1.23031 0.91857 0.89726 0.97360 1.21041 1.04013 0.95586 0.98677 1.18007 0.79816 0.85966 0.81264 1.90832 1.37441 1.64596 1.47520 1.45902 1.53842 1.13739 1.24351 1.21436 1.00836 0.80763 0.97405 1.21784 1.01254 0.96240 0.96647 1.22507 1.00423 0.93563 0.96085 0.88234 1.23612 1.02693 0.95753 0.97430 1.22422 0.88924 0.87379 0.98799 0.88544 1.92830 1.60969 1.66786 1.97185 1.23721 1.01198 0.97489 0.97383 1.21639 0.92625 0.92926 0.94305 0.77184 0.86250 1.17278 1.17758 0.82019 0.82171 0.76422 0.90941 0.90956 0.90589 0.90727 0.89939 0.88139 0.88174 0.89936 0.82978 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.28 12.78 -35.23 -0.45 -0.17 16 2 C -0.06 0.08 2.83 36.01 0.10 0.18 16 3 Si 0.69 -1.62 29.82 -169.99 -5.07 -6.69 16 4 C -0.18 0.10 5.39 -104.54 -0.56 -0.46 16 5 C 0.13 -0.09 9.84 -17.47 -0.17 -0.27 16 6 N -0.48 -0.19 10.35 -12.91 -0.13 -0.32 16 7 C 0.14 -0.13 10.71 -17.13 -0.18 -0.31 16 8 C -0.19 -0.10 5.89 -104.82 -0.62 -0.71 16 9 C 0.56 0.97 7.78 -12.33 -0.10 0.88 16 10 O -0.53 -3.06 16.42 5.32 0.09 -2.97 16 11 N -0.73 1.09 5.51 -61.25 -0.34 0.75 16 12 C 0.12 -0.18 5.67 -4.04 -0.02 -0.20 16 13 C -0.12 0.45 5.15 -26.73 -0.14 0.31 16 14 C -0.11 0.27 3.62 -89.81 -0.32 -0.06 16 15 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 16 C -0.16 0.41 7.54 -25.92 -0.20 0.21 16 17 C 0.06 -0.07 5.70 -25.82 -0.15 -0.22 16 18 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 19 F -0.20 -0.46 17.38 2.25 0.04 -0.42 16 20 C -0.16 0.35 7.54 -25.82 -0.19 0.16 16 21 C 0.01 0.01 9.31 -38.87 -0.36 -0.35 16 22 H 0.38 -1.70 8.70 45.56 0.40 -1.30 16 23 H 0.12 -0.10 7.96 -51.93 -0.41 -0.52 16 24 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 25 H -0.25 0.06 7.11 56.52 0.40 0.46 16 26 H 0.16 -0.48 4.88 -52.48 -0.26 -0.74 16 27 H 0.16 -0.68 6.42 -52.49 -0.34 -1.02 16 28 H 0.40 -1.77 6.54 -40.82 -0.27 -2.04 16 29 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.07 -0.02 8.14 -51.92 -0.42 -0.44 16 31 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 32 H 0.07 -0.34 7.88 -51.93 -0.41 -0.75 16 33 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.10 -0.41 8.10 -51.92 -0.42 -0.83 16 35 H 0.10 -0.36 7.92 -51.93 -0.41 -0.77 16 36 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 37 H 0.15 0.27 7.74 -52.49 -0.41 -0.14 16 LS Contribution 316.56 15.07 4.77 4.77 Total: 0.00 -8.68 316.56 -8.69 -17.37 By element: Atomic # 1 Polarization: -6.80 SS G_CDS: -4.68 Total: -11.48 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: -2.91 Total: -0.84 kcal Atomic # 7 Polarization: 0.90 SS G_CDS: -0.47 Total: 0.43 kcal Atomic # 8 Polarization: -2.78 SS G_CDS: -0.36 Total: -3.14 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.07 Total: -6.69 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -8.68 -8.69 -17.37 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13287814.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.444 kcal (2) G-P(sol) polarization free energy of solvation -8.679 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.124 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.688 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.367 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.812 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds