Wall clock time and date at job start Sun Mar 7 2021 02:34:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38315 * 120.34779 * 119.99654 * 4 2 1 6 6 N 1.31958 * 121.08030 * 179.97438 * 5 4 2 7 7 C 1.31661 * 121.88083 * 359.97438 * 6 5 4 8 8 C 1.39563 * 120.56793 * 0.02562 * 7 6 5 9 9 C 1.47837 * 120.56236 * 179.97438 * 8 7 6 10 10 O 1.21554 * 119.99969 * 179.97438 * 9 8 7 11 11 N 1.34779 * 120.00055 * 0.02562 * 9 8 7 12 12 C 1.46499 * 119.99973 * 179.97438 * 11 9 8 13 13 C 1.53004 * 109.46965 * 179.97438 * 12 11 9 14 14 C 1.53001 * 109.46913 * 180.02562 * 13 12 11 15 15 H 1.08995 * 112.85215 * 45.33916 * 14 13 12 16 16 C 1.53783 * 113.61300 * 176.53363 * 14 13 12 17 17 C 1.53782 * 87.08242 * 139.97971 * 16 14 13 18 18 H 1.09003 * 113.61253 * 219.93814 * 17 16 14 19 19 F 1.39896 * 113.61379 * 89.11609 * 17 16 14 20 20 C 1.53781 * 113.61197 * 274.13853 * 14 13 12 21 21 C 1.38395 * 120.34893 * 299.72522 * 4 2 1 22 22 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 23 23 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 24 24 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 25 25 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 26 26 H 1.08003 * 119.45808 * 0.02562 * 5 4 2 27 27 H 1.07998 * 119.71992 * 180.02562 * 7 6 5 28 28 H 0.97003 * 119.99481 * 359.97438 * 11 9 8 29 29 H 1.08997 * 109.47688 * 300.00223 * 12 11 9 30 30 H 1.09008 * 109.47001 * 60.00424 * 12 11 9 31 31 H 1.09001 * 109.47286 * 300.00297 * 13 12 11 32 32 H 1.08998 * 109.46708 * 60.00583 * 13 12 11 33 33 H 1.08996 * 113.61596 * 254.53105 * 16 14 13 34 34 H 1.09007 * 113.61471 * 25.43143 * 16 14 13 35 35 H 1.09004 * 113.61787 * 334.56717 * 20 14 13 36 36 H 1.08998 * 113.61298 * 105.47324 * 20 14 13 37 37 H 1.08000 * 120.85614 * 359.97438 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7268 -0.0450 -2.1457 6 7 3.1749 -0.6530 -3.2277 7 6 2.8895 -1.9120 -3.4865 8 6 2.0926 -2.6532 -2.6128 9 6 1.7718 -4.0667 -2.9038 10 8 1.0771 -4.7028 -2.1355 11 7 2.2503 -4.6503 -4.0205 12 6 1.9328 -6.0511 -4.3085 13 6 2.5937 -6.4634 -5.6254 14 6 2.2616 -7.9263 -5.9266 15 1 1.2087 -8.1618 -5.7718 16 6 2.8106 -8.4173 -7.2765 17 6 3.1574 -9.7366 -6.5665 18 1 4.1165 -10.1565 -6.8696 19 9 2.1208 -10.6757 -6.5915 20 6 3.2211 -8.9258 -5.2592 21 6 1.6060 -2.0368 -1.4539 22 1 -0.3934 0.4418 -0.7650 23 1 1.7923 -0.5138 0.8899 24 1 1.5616 2.4678 1.2086 25 1 3.5346 1.7703 -0.0322 26 1 2.9861 0.9889 -1.9714 27 1 3.2754 -2.3752 -4.3826 28 1 2.8050 -4.1426 -4.6334 29 1 2.3057 -6.6816 -3.5014 30 1 0.8524 -6.1690 -4.3922 31 1 2.2204 -5.8329 -6.4324 32 1 3.6741 -6.3455 -5.5422 33 1 2.0462 -8.5235 -8.0462 34 1 3.6845 -7.8635 -7.6200 35 1 4.2073 -8.5113 -5.0502 36 1 2.7875 -9.4419 -4.4027 37 1 0.9905 -2.5818 -0.7535 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_13287814.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:05 Heat of formation + Delta-G solvation = -58.573253 kcal Electronic energy + Delta-G solvation = -20966.469261 eV Core-core repulsion = 17432.394635 eV Total energy + Delta-G solvation = -3534.074625 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.121 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -48.67077 -41.92074 -40.41802 -39.33316 -37.94445 -36.27618 -33.77734 -33.46812 -31.51778 -27.31263 -26.95454 -26.64623 -24.88004 -23.83019 -22.84301 -21.69973 -20.42932 -19.28244 -18.20676 -17.94354 -17.71092 -17.22949 -16.88987 -16.78092 -16.43710 -16.33028 -15.99605 -15.77660 -15.50606 -14.98881 -14.76987 -14.42604 -14.39321 -14.24506 -13.80741 -13.52259 -13.45412 -13.09564 -12.73713 -12.54175 -12.16314 -11.98232 -11.82069 -11.53518 -11.18870 -11.11151 -10.99347 -10.63390 -10.59704 -10.36675 -10.14870 -5.02434 -0.59269 -0.04940 1.22291 1.60342 1.63704 1.90902 1.98690 2.61683 3.09876 3.28625 3.35112 3.37173 3.43082 3.60820 3.65206 3.68488 3.71880 3.77747 3.87779 4.07642 4.12177 4.22395 4.28503 4.43077 4.46585 4.59756 4.72190 4.74597 4.82164 4.82850 4.90198 4.94816 5.03097 5.11465 5.18942 5.26607 5.33010 5.50355 6.33644 6.62715 6.69560 7.01134 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.075 4.075 3 Si 0.786 3.214 4 C -0.176 4.176 5 C 0.130 3.870 6 N -0.492 5.492 7 C 0.148 3.852 8 C -0.197 4.197 9 C 0.561 3.439 10 O -0.579 6.579 11 N -0.707 5.707 12 C 0.118 3.882 13 C -0.108 4.108 14 C -0.109 4.109 15 H 0.081 0.919 16 C -0.147 4.147 17 C 0.043 3.957 18 H 0.112 0.888 19 F -0.222 7.222 20 C -0.158 4.158 21 C -0.004 4.004 22 H 0.397 0.603 23 H 0.111 0.889 24 H -0.296 1.296 25 H -0.274 1.274 26 H 0.185 0.815 27 H 0.195 0.805 28 H 0.418 0.582 29 H 0.059 0.941 30 H 0.056 0.944 31 H 0.089 0.911 32 H 0.094 0.906 33 H 0.074 0.926 34 H 0.124 0.876 35 H 0.120 0.880 36 H 0.066 0.934 37 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.207 4.278 -5.850 8.380 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.185 4.185 3 Si 0.690 3.310 4 C -0.178 4.178 5 C -0.026 4.026 6 N -0.200 5.200 7 C -0.010 4.010 8 C -0.202 4.202 9 C 0.348 3.652 10 O -0.460 6.460 11 N -0.359 5.359 12 C -0.005 4.005 13 C -0.146 4.146 14 C -0.128 4.128 15 H 0.100 0.900 16 C -0.185 4.185 17 C 0.007 3.993 18 H 0.130 0.870 19 F -0.203 7.203 20 C -0.195 4.195 21 C -0.030 4.030 22 H 0.247 0.753 23 H 0.128 0.872 24 H -0.223 1.223 25 H -0.201 1.201 26 H 0.201 0.799 27 H 0.211 0.789 28 H 0.256 0.744 29 H 0.077 0.923 30 H 0.074 0.926 31 H 0.108 0.892 32 H 0.113 0.887 33 H 0.093 0.907 34 H 0.142 0.858 35 H 0.138 0.862 36 H 0.085 0.915 37 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 4.779 4.510 -4.969 8.239 hybrid contribution -0.669 -1.387 0.919 1.794 sum 4.111 3.123 -4.050 6.561 Atomic orbital electron populations 1.86510 1.17047 1.82189 1.50545 1.25273 0.85493 1.11633 0.96094 0.93711 0.78029 0.73785 0.85433 1.21448 1.01471 0.95119 0.99790 1.23233 0.90721 1.00540 0.88114 1.67814 1.21960 1.10655 1.19564 1.23477 0.90582 0.89228 0.97722 1.20999 1.04994 0.95089 0.99143 1.18265 0.79221 0.86336 0.81398 1.90805 1.39972 1.65787 1.49394 1.45781 1.52895 1.13764 1.23502 1.21432 1.00153 0.80516 0.98400 1.21709 1.02186 0.95304 0.95360 1.22466 0.99496 0.94401 0.96429 0.90021 1.23611 1.03292 0.94802 0.96778 1.22790 0.88836 0.87714 1.00003 0.87006 1.92774 1.62261 1.67934 1.97365 1.23760 1.02169 0.97273 0.96348 1.21640 0.93092 0.93730 0.94589 0.75296 0.87185 1.22345 1.20076 0.79895 0.78866 0.74381 0.92266 0.92593 0.89240 0.88717 0.90736 0.85751 0.86161 0.91511 0.84819 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.17 12.78 -148.98 -1.90 -1.74 16 2 C -0.08 0.14 2.83 71.24 0.20 0.34 16 3 Si 0.79 -3.96 29.82 68.60 2.05 -1.91 16 4 C -0.18 0.15 5.39 -19.81 -0.11 0.04 16 5 C 0.13 -0.32 9.84 84.69 0.83 0.51 16 6 N -0.49 0.34 10.35 -194.75 -2.01 -1.67 16 7 C 0.15 -0.47 10.71 85.04 0.91 0.44 16 8 C -0.20 -0.27 5.89 -19.99 -0.12 -0.39 16 9 C 0.56 2.47 7.78 86.78 0.68 3.14 16 10 O -0.58 -8.13 16.42 -3.88 -0.06 -8.20 16 11 N -0.71 2.41 5.51 -465.97 -2.57 -0.16 16 12 C 0.12 -0.31 5.67 86.38 0.49 0.18 16 13 C -0.11 0.95 5.15 30.60 0.16 1.11 16 14 C -0.11 0.56 3.62 -10.27 -0.04 0.52 16 15 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 16 C -0.15 0.90 7.54 31.12 0.23 1.13 16 17 C 0.04 -0.10 5.70 31.18 0.18 0.08 16 18 H 0.11 -0.65 8.14 -2.39 -0.02 -0.67 16 19 F -0.22 -1.34 17.38 44.97 0.78 -0.56 16 20 C -0.16 0.70 7.54 31.18 0.24 0.94 16 21 C 0.00 -0.01 9.31 22.73 0.21 0.20 16 22 H 0.40 -3.47 8.70 -74.05 -0.64 -4.12 16 23 H 0.11 -0.04 7.96 -2.39 -0.02 -0.06 16 24 H -0.30 -0.87 7.11 99.48 0.71 -0.16 16 25 H -0.27 0.38 7.11 99.48 0.71 1.08 16 26 H 0.18 -1.40 4.88 -2.91 -0.01 -1.42 16 27 H 0.19 -2.16 6.42 -2.91 -0.02 -2.18 16 28 H 0.42 -4.51 6.54 -92.71 -0.61 -5.12 16 29 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 30 H 0.06 0.06 8.14 -2.38 -0.02 0.04 16 31 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 32 H 0.09 -1.15 7.88 -2.39 -0.02 -1.17 16 33 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 34 H 0.12 -1.34 8.10 -2.38 -0.02 -1.36 16 35 H 0.12 -1.04 7.92 -2.39 -0.02 -1.06 16 36 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 37 H 0.13 0.87 7.74 -2.91 -0.02 0.85 16 Total: 0.00 -22.92 316.56 0.04 -22.88 By element: Atomic # 1 Polarization: -16.79 SS G_CDS: -0.10 Total: -16.89 kcal Atomic # 6 Polarization: 4.38 SS G_CDS: 3.87 Total: 8.25 kcal Atomic # 7 Polarization: 2.75 SS G_CDS: -4.58 Total: -1.83 kcal Atomic # 8 Polarization: -7.97 SS G_CDS: -1.97 Total: -9.93 kcal Atomic # 9 Polarization: -1.34 SS G_CDS: 0.78 Total: -0.56 kcal Atomic # 14 Polarization: -3.96 SS G_CDS: 2.05 Total: -1.91 kcal Total: -22.92 0.04 -22.88 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13287814.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.690 kcal (2) G-P(sol) polarization free energy of solvation -22.923 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.613 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.884 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.573 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds