Wall clock time and date at job start Sun Mar 7 2021 02:34:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.36414 * 125.80551 * 2 1 4 4 C 1.47380 * 127.19000 * 359.96898 * 3 2 1 5 5 O 1.21614 * 120.00090 * 359.97438 * 4 3 2 6 6 N 1.34773 * 120.00190 * 180.02562 * 4 3 2 7 7 C 1.46501 * 120.00377 * 179.97438 * 6 4 3 8 8 C 1.52997 * 109.47242 * 179.97438 * 7 6 4 9 9 C 1.53004 * 109.46903 * 180.02562 * 8 7 6 10 10 H 1.08993 * 112.85241 * 45.33168 * 9 8 7 11 11 C 1.53784 * 113.61211 * 176.53012 * 9 8 7 12 12 C 1.53778 * 87.07743 * 139.97819 * 11 9 8 13 13 H 1.09002 * 113.61294 * 220.01570 * 12 11 9 14 14 F 1.39904 * 113.61514 * 89.20154 * 12 11 9 15 15 C 1.53778 * 113.61230 * 274.13570 * 9 8 7 16 16 C 1.47014 * 105.61702 * 179.97438 * 3 2 1 17 17 C 1.34172 * 105.95795 * 0.02562 * 16 3 2 18 18 C 1.50700 * 125.44135 * 180.02562 * 17 16 3 19 19 O 1.42893 * 109.46998 * 65.00295 * 18 17 16 20 20 Si 1.86301 * 109.47293 * 185.00303 * 18 17 16 21 21 O 1.33654 * 125.80096 * 179.97438 * 2 1 3 22 22 H 1.08998 * 109.47079 * 180.02562 * 1 2 3 23 23 H 1.09001 * 109.46613 * 300.01359 * 1 2 3 24 24 H 1.08999 * 109.47072 * 60.01535 * 1 2 3 25 25 H 0.96999 * 119.99847 * 359.97438 * 6 4 3 26 26 H 1.09003 * 109.47008 * 300.00272 * 7 6 4 27 27 H 1.09009 * 109.46675 * 59.99396 * 7 6 4 28 28 H 1.09003 * 109.47069 * 299.99478 * 8 7 6 29 29 H 1.08997 * 109.47156 * 59.99966 * 8 7 6 30 30 H 1.08997 * 113.61448 * 254.52807 * 11 9 8 31 31 H 1.08998 * 113.61628 * 25.42886 * 11 9 8 32 32 H 1.09007 * 113.61209 * 334.56967 * 15 9 8 33 33 H 1.09002 * 113.61663 * 105.46922 * 15 9 8 34 34 H 1.08001 * 127.02219 * 180.02562 * 16 3 2 35 35 H 1.08998 * 109.47014 * 304.99882 * 18 17 16 36 36 H 0.96703 * 114.00521 * 60.00116 * 19 18 17 37 37 H 1.48499 * 110.00159 * 180.02562 * 20 18 17 38 38 H 1.48502 * 109.99780 * 301.32149 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3051 1.1063 0.0000 4 6 1.8741 2.5157 -0.0006 5 8 0.6891 2.7892 -0.0017 6 7 2.7931 3.5015 -0.0011 7 6 2.3648 4.9024 -0.0023 8 6 3.5950 5.8120 -0.0019 9 6 3.1475 7.2751 -0.0025 10 1 2.3482 7.4736 0.7114 11 6 4.3123 8.2755 0.0831 12 6 3.5458 9.1347 -0.9362 13 1 4.1861 9.5938 -1.6895 14 9 2.6600 10.0445 -0.3487 15 6 2.8709 7.8340 -1.4081 16 6 3.6849 0.5990 0.0006 17 6 3.5860 -0.7391 0.0004 18 6 4.7459 -1.7011 0.0014 19 8 5.4748 -1.5672 1.2231 20 14 4.1071 -3.4444 -0.1526 21 8 2.2889 -1.0840 0.0005 22 1 -0.3633 -1.0276 0.0005 23 1 -0.3632 0.5141 0.8899 24 1 -0.3633 0.5136 -0.8901 25 1 3.7383 3.2833 -0.0006 26 1 1.7674 5.0989 -0.8926 27 1 1.7667 5.1002 0.8874 28 1 4.1919 5.6154 0.8887 29 1 4.1933 5.6142 -0.8913 30 1 4.4136 8.7451 1.0615 31 1 5.2547 7.8823 -0.2983 32 1 3.4185 7.3198 -2.1981 33 1 1.8102 7.9477 -1.6319 34 1 4.5929 1.1838 0.0012 35 1 5.4026 -1.4793 -0.8398 36 1 4.9515 -1.7503 2.0155 37 1 5.2413 -4.4029 -0.1522 38 1 3.1852 -3.7486 0.9712 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13308374.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:09 Heat of formation + Delta-G solvation = -85.723982 kcal Electronic energy + Delta-G solvation = -21839.463936 eV Core-core repulsion = 18179.181827 eV Total energy + Delta-G solvation = -3660.282110 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 284.126 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -48.60719 -43.74838 -40.47394 -39.41795 -38.21946 -36.05862 -34.16796 -33.19245 -31.79470 -29.42906 -27.04201 -26.59097 -25.44361 -23.99722 -22.98589 -22.01620 -20.78993 -20.43754 -19.02654 -17.98794 -17.70389 -17.32728 -17.04510 -16.73425 -16.67278 -16.44695 -16.01104 -15.89416 -15.72153 -15.30637 -14.70963 -14.51186 -14.21728 -14.14649 -13.95041 -13.86530 -13.76581 -13.62656 -13.18469 -12.99392 -12.87602 -12.62144 -12.13361 -12.10599 -11.92159 -11.32554 -11.24357 -11.01670 -10.87723 -10.73123 -10.09289 -9.57017 -5.03224 0.30717 0.82658 1.08098 1.40945 1.67067 1.87891 2.18298 2.38224 3.06577 3.15258 3.20284 3.32403 3.46667 3.56291 3.71417 3.75751 3.76180 3.99572 4.11046 4.16223 4.24003 4.30821 4.40348 4.46157 4.51609 4.58288 4.61617 4.65937 4.69166 4.74587 4.81336 4.89910 4.98923 5.03523 5.08679 5.20042 5.35598 5.41553 5.89098 6.16738 6.49995 7.25238 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C 0.095 3.905 3 C -0.254 4.254 4 C 0.591 3.409 5 O -0.538 6.538 6 N -0.726 5.726 7 C 0.121 3.879 8 C -0.121 4.121 9 C -0.107 4.107 10 H 0.099 0.901 11 C -0.157 4.157 12 C 0.061 3.939 13 H 0.096 0.904 14 F -0.197 7.197 15 C -0.160 4.160 16 C -0.148 4.148 17 C -0.055 4.055 18 C -0.034 4.034 19 O -0.521 6.521 20 Si 0.701 3.299 21 O -0.168 6.168 22 H 0.080 0.920 23 H 0.098 0.902 24 H 0.100 0.900 25 H 0.401 0.599 26 H 0.071 0.929 27 H 0.069 0.931 28 H 0.074 0.926 29 H 0.073 0.927 30 H 0.081 0.919 31 H 0.100 0.900 32 H 0.100 0.900 33 H 0.082 0.918 34 H 0.158 0.842 35 H 0.138 0.862 36 H 0.381 0.619 37 H -0.249 1.249 38 H -0.256 1.256 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.789 -1.540 -2.258 3.905 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C 0.042 3.958 3 C -0.258 4.258 4 C 0.379 3.621 5 O -0.417 6.417 6 N -0.378 5.378 7 C -0.003 4.003 8 C -0.159 4.159 9 C -0.126 4.126 10 H 0.117 0.883 11 C -0.195 4.195 12 C 0.025 3.975 13 H 0.114 0.886 14 F -0.178 7.178 15 C -0.197 4.197 16 C -0.167 4.167 17 C -0.103 4.103 18 C -0.143 4.143 19 O -0.328 6.328 20 Si 0.600 3.400 21 O -0.065 6.065 22 H 0.099 0.901 23 H 0.116 0.884 24 H 0.118 0.882 25 H 0.235 0.765 26 H 0.089 0.911 27 H 0.088 0.912 28 H 0.092 0.908 29 H 0.092 0.908 30 H 0.100 0.900 31 H 0.118 0.882 32 H 0.118 0.882 33 H 0.101 0.899 34 H 0.175 0.825 35 H 0.155 0.845 36 H 0.229 0.771 37 H -0.173 1.173 38 H -0.180 1.180 Dipole moment (debyes) X Y Z Total from point charges 2.260 -2.242 -2.274 3.912 hybrid contribution 0.718 0.689 1.172 1.538 sum 2.978 -1.553 -1.101 3.534 Atomic orbital electron populations 1.20565 0.83265 1.04058 1.05497 1.22916 0.94094 0.82861 0.95962 1.21136 0.93234 0.93826 1.17627 1.17164 0.85410 0.83703 0.75830 1.90806 1.16519 1.84125 1.50252 1.45776 1.09777 1.06142 1.76072 1.21377 0.96982 0.79086 1.02823 1.21772 0.97296 0.93677 1.03121 1.22506 0.98765 0.93390 0.97889 0.88280 1.23611 0.98406 0.96923 1.00577 1.22418 0.90836 0.88078 0.96184 0.88567 1.92830 1.70517 1.68677 1.85757 1.23714 1.02740 0.95633 0.97641 1.22577 0.96451 0.93492 1.04184 1.22549 0.82915 0.95568 1.09299 1.24355 0.91302 1.08002 0.90689 1.86658 1.39382 1.91542 1.15233 0.94383 0.81378 0.73545 0.90660 1.83689 1.16391 1.35012 1.71395 0.90128 0.88365 0.88193 0.76511 0.91115 0.91238 0.90760 0.90817 0.89982 0.88174 0.88176 0.89931 0.82472 0.84486 0.77065 1.17281 1.17963 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.02 9.14 36.01 0.33 0.34 16 2 C 0.10 0.15 7.37 -34.96 -0.26 -0.11 16 3 C -0.25 -0.47 6.31 -103.28 -0.65 -1.12 16 4 C 0.59 1.68 7.81 -12.54 -0.10 1.58 16 5 O -0.54 -3.13 15.66 5.27 0.08 -3.05 16 6 N -0.73 0.03 5.55 -61.39 -0.34 -0.31 16 7 C 0.12 -0.06 5.67 -4.04 -0.02 -0.09 16 8 C -0.12 0.34 5.15 -26.73 -0.14 0.20 16 9 C -0.11 0.20 3.62 -89.80 -0.32 -0.12 16 10 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 11 C -0.16 0.33 7.54 -25.92 -0.20 0.13 16 12 C 0.06 -0.05 5.69 -25.83 -0.15 -0.20 16 13 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 14 F -0.20 -0.52 17.38 2.25 0.04 -0.48 16 15 C -0.16 0.29 7.54 -25.83 -0.19 0.09 16 16 C -0.15 -0.02 10.48 -37.46 -0.39 -0.41 16 17 C -0.06 -0.01 6.18 -35.74 -0.22 -0.23 16 18 C -0.03 0.05 2.97 36.01 0.11 0.15 16 19 O -0.52 0.12 12.88 -35.23 -0.45 -0.34 16 20 Si 0.70 -0.99 32.09 -169.99 -5.46 -6.45 16 21 O -0.17 -0.18 8.90 7.65 0.07 -0.11 16 22 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 23 H 0.10 0.02 8.08 -51.93 -0.42 -0.40 16 24 H 0.10 -0.01 8.08 -51.93 -0.42 -0.43 16 25 H 0.40 -0.94 7.64 -40.82 -0.31 -1.25 16 26 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 27 H 0.07 0.04 8.14 -51.92 -0.42 -0.38 16 28 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 29 H 0.07 -0.26 7.88 -51.93 -0.41 -0.67 16 30 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 32 H 0.10 -0.31 7.92 -51.92 -0.41 -0.72 16 33 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.16 -0.31 7.74 -52.49 -0.41 -0.71 16 35 H 0.14 -0.40 7.96 -51.93 -0.41 -0.82 16 36 H 0.38 -1.05 8.70 45.56 0.40 -0.65 16 37 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 38 H -0.26 -0.35 7.11 56.52 0.40 0.06 16 LS Contribution 329.41 15.07 4.96 4.96 Total: 0.00 -7.32 329.41 -8.70 -16.01 By element: Atomic # 1 Polarization: -5.07 SS G_CDS: -5.39 Total: -10.47 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -2.21 Total: 0.22 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -0.34 Total: -0.31 kcal Atomic # 8 Polarization: -3.19 SS G_CDS: -0.30 Total: -3.49 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.04 Total: -0.48 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: -5.46 Total: -6.45 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -7.32 -8.70 -16.01 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13308374.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.710 kcal (2) G-P(sol) polarization free energy of solvation -7.315 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.025 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.699 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.014 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.724 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds