Wall clock time and date at job start Sun Mar 7 2021 02:34:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.36414 * 125.80551 * 2 1 4 4 C 1.47380 * 127.19000 * 359.96898 * 3 2 1 5 5 O 1.21614 * 120.00090 * 359.97438 * 4 3 2 6 6 N 1.34773 * 120.00190 * 180.02562 * 4 3 2 7 7 C 1.46501 * 120.00377 * 179.97438 * 6 4 3 8 8 C 1.52997 * 109.47242 * 179.97438 * 7 6 4 9 9 C 1.53004 * 109.46903 * 180.02562 * 8 7 6 10 10 H 1.08993 * 112.85241 * 45.33168 * 9 8 7 11 11 C 1.53784 * 113.61211 * 176.53012 * 9 8 7 12 12 C 1.53778 * 87.07743 * 139.97819 * 11 9 8 13 13 H 1.09002 * 113.61294 * 220.01570 * 12 11 9 14 14 F 1.39904 * 113.61514 * 89.20154 * 12 11 9 15 15 C 1.53778 * 113.61230 * 274.13570 * 9 8 7 16 16 C 1.47014 * 105.61702 * 179.97438 * 3 2 1 17 17 C 1.34172 * 105.95795 * 0.02562 * 16 3 2 18 18 C 1.50700 * 125.44135 * 180.02562 * 17 16 3 19 19 O 1.42893 * 109.46998 * 65.00295 * 18 17 16 20 20 Si 1.86301 * 109.47293 * 185.00303 * 18 17 16 21 21 O 1.33654 * 125.80096 * 179.97438 * 2 1 3 22 22 H 1.08998 * 109.47079 * 180.02562 * 1 2 3 23 23 H 1.09001 * 109.46613 * 300.01359 * 1 2 3 24 24 H 1.08999 * 109.47072 * 60.01535 * 1 2 3 25 25 H 0.96999 * 119.99847 * 359.97438 * 6 4 3 26 26 H 1.09003 * 109.47008 * 300.00272 * 7 6 4 27 27 H 1.09009 * 109.46675 * 59.99396 * 7 6 4 28 28 H 1.09003 * 109.47069 * 299.99478 * 8 7 6 29 29 H 1.08997 * 109.47156 * 59.99966 * 8 7 6 30 30 H 1.08997 * 113.61448 * 254.52807 * 11 9 8 31 31 H 1.08998 * 113.61628 * 25.42886 * 11 9 8 32 32 H 1.09007 * 113.61209 * 334.56967 * 15 9 8 33 33 H 1.09002 * 113.61663 * 105.46922 * 15 9 8 34 34 H 1.08001 * 127.02219 * 180.02562 * 16 3 2 35 35 H 1.08998 * 109.47014 * 304.99882 * 18 17 16 36 36 H 0.96703 * 114.00521 * 60.00116 * 19 18 17 37 37 H 1.48499 * 110.00159 * 180.02562 * 20 18 17 38 38 H 1.48502 * 109.99780 * 301.32149 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3051 1.1063 0.0000 4 6 1.8741 2.5157 -0.0006 5 8 0.6891 2.7892 -0.0017 6 7 2.7931 3.5015 -0.0011 7 6 2.3648 4.9024 -0.0023 8 6 3.5950 5.8120 -0.0019 9 6 3.1475 7.2751 -0.0025 10 1 2.3482 7.4736 0.7114 11 6 4.3123 8.2755 0.0831 12 6 3.5458 9.1347 -0.9362 13 1 4.1861 9.5938 -1.6895 14 9 2.6600 10.0445 -0.3487 15 6 2.8709 7.8340 -1.4081 16 6 3.6849 0.5990 0.0006 17 6 3.5860 -0.7391 0.0004 18 6 4.7459 -1.7011 0.0014 19 8 5.4748 -1.5672 1.2231 20 14 4.1071 -3.4444 -0.1526 21 8 2.2889 -1.0840 0.0005 22 1 -0.3633 -1.0276 0.0005 23 1 -0.3632 0.5141 0.8899 24 1 -0.3633 0.5136 -0.8901 25 1 3.7383 3.2833 -0.0006 26 1 1.7674 5.0989 -0.8926 27 1 1.7667 5.1002 0.8874 28 1 4.1919 5.6154 0.8887 29 1 4.1933 5.6142 -0.8913 30 1 4.4136 8.7451 1.0615 31 1 5.2547 7.8823 -0.2983 32 1 3.4185 7.3198 -2.1981 33 1 1.8102 7.9477 -1.6319 34 1 4.5929 1.1838 0.0012 35 1 5.4026 -1.4793 -0.8398 36 1 4.9515 -1.7503 2.0155 37 1 5.2413 -4.4029 -0.1522 38 1 3.1852 -3.7486 0.9712 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_13308374.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:08 Heat of formation + Delta-G solvation = -83.352396 kcal Electronic energy + Delta-G solvation = -21839.361097 eV Core-core repulsion = 18179.181827 eV Total energy + Delta-G solvation = -3660.179270 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 284.126 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -48.67061 -43.77817 -40.60141 -39.33656 -38.15210 -36.14498 -34.22620 -33.18117 -31.74792 -29.39377 -26.91072 -26.55188 -25.40478 -24.01461 -22.90672 -22.06116 -20.79852 -20.37221 -19.00840 -18.00774 -17.72889 -17.28349 -17.01710 -16.71348 -16.70972 -16.47855 -15.97650 -15.88602 -15.72472 -15.33203 -14.79522 -14.51832 -14.21397 -14.18151 -13.93117 -13.85881 -13.76358 -13.47870 -13.10068 -12.94387 -12.83698 -12.53050 -12.18274 -11.97620 -11.81991 -11.33144 -11.18609 -10.98310 -10.93493 -10.73120 -10.18148 -9.59680 -4.93880 0.21579 0.82304 1.17411 1.42083 1.70718 1.91910 2.14913 2.23436 3.17327 3.28240 3.34906 3.38427 3.60799 3.67433 3.74599 3.77375 3.87737 4.09578 4.12614 4.25452 4.38772 4.43838 4.47966 4.58360 4.58943 4.64287 4.71725 4.73708 4.78835 4.82531 4.92963 5.02685 5.10878 5.13009 5.18025 5.20715 5.38099 5.49523 5.87909 6.33214 6.47289 7.14280 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.084 3.916 3 C -0.269 4.269 4 C 0.584 3.416 5 O -0.577 6.577 6 N -0.712 5.712 7 C 0.121 3.879 8 C -0.107 4.107 9 C -0.109 4.109 10 H 0.082 0.918 11 C -0.149 4.149 12 C 0.044 3.956 13 H 0.113 0.887 14 F -0.222 7.222 15 C -0.156 4.156 16 C -0.145 4.145 17 C -0.059 4.059 18 C -0.031 4.031 19 O -0.534 6.534 20 Si 0.768 3.232 21 O -0.173 6.173 22 H 0.098 0.902 23 H 0.091 0.909 24 H 0.096 0.904 25 H 0.414 0.586 26 H 0.060 0.940 27 H 0.053 0.947 28 H 0.083 0.917 29 H 0.092 0.908 30 H 0.073 0.927 31 H 0.123 0.877 32 H 0.120 0.880 33 H 0.068 0.932 34 H 0.180 0.820 35 H 0.160 0.840 36 H 0.390 0.610 37 H -0.283 1.283 38 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.495 -1.745 -2.894 5.624 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C 0.031 3.969 3 C -0.274 4.274 4 C 0.373 3.627 5 O -0.459 6.459 6 N -0.364 5.364 7 C -0.002 4.002 8 C -0.145 4.145 9 C -0.128 4.128 10 H 0.100 0.900 11 C -0.186 4.186 12 C 0.008 3.992 13 H 0.131 0.869 14 F -0.203 7.203 15 C -0.194 4.194 16 C -0.164 4.164 17 C -0.107 4.107 18 C -0.141 4.141 19 O -0.342 6.342 20 Si 0.673 3.327 21 O -0.070 6.070 22 H 0.117 0.883 23 H 0.109 0.891 24 H 0.115 0.885 25 H 0.251 0.749 26 H 0.078 0.922 27 H 0.071 0.929 28 H 0.102 0.898 29 H 0.110 0.890 30 H 0.092 0.908 31 H 0.141 0.859 32 H 0.138 0.862 33 H 0.087 0.913 34 H 0.197 0.803 35 H 0.177 0.823 36 H 0.240 0.760 37 H -0.209 1.209 38 H -0.223 1.223 Dipole moment (debyes) X Y Z Total from point charges 3.999 -2.431 -2.917 5.514 hybrid contribution 0.189 0.723 1.408 1.594 sum 4.188 -1.708 -1.509 4.768 Atomic orbital electron populations 1.20570 0.82654 1.05052 1.04953 1.23204 0.94762 0.83055 0.95914 1.21225 0.94392 0.93382 1.18378 1.17419 0.85226 0.84558 0.75457 1.90781 1.18120 1.84732 1.52285 1.45700 1.10162 1.05845 1.74676 1.21374 0.97994 0.79269 1.01566 1.21685 0.96201 0.92176 1.04433 1.22466 0.98627 0.94156 0.97522 0.89982 1.23613 0.98972 0.96131 0.99901 1.22767 0.91047 0.88244 0.97119 0.86931 1.92776 1.71521 1.69697 1.86271 1.23745 1.02162 0.95283 0.98197 1.22812 0.96344 0.93603 1.03617 1.22854 0.82788 0.95999 1.09021 1.24502 0.91180 1.07261 0.91108 1.86637 1.40095 1.91530 1.15970 0.93546 0.78175 0.72158 0.88853 1.83691 1.16912 1.34969 1.71414 0.88326 0.89069 0.88543 0.74918 0.92177 0.92855 0.89833 0.88980 0.90782 0.85915 0.86204 0.91301 0.80266 0.82280 0.76017 1.20911 1.22256 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.04 9.14 71.24 0.65 0.61 16 2 C 0.08 0.30 7.37 25.26 0.19 0.48 16 3 C -0.27 -1.03 6.31 -18.99 -0.12 -1.15 16 4 C 0.58 3.72 7.81 86.65 0.68 4.40 16 5 O -0.58 -7.69 15.66 -4.08 -0.06 -7.76 16 6 N -0.71 0.22 5.55 -466.41 -2.59 -2.37 16 7 C 0.12 -0.09 5.67 86.38 0.49 0.40 16 8 C -0.11 0.72 5.15 30.59 0.16 0.87 16 9 C -0.11 0.42 3.62 -10.27 -0.04 0.39 16 10 H 0.08 -0.04 8.14 -2.39 -0.02 -0.06 16 11 C -0.15 0.74 7.54 31.12 0.23 0.98 16 12 C 0.04 -0.08 5.69 31.18 0.18 0.10 16 13 H 0.11 -0.61 8.14 -2.39 -0.02 -0.63 16 14 F -0.22 -1.42 17.38 44.97 0.78 -0.64 16 15 C -0.16 0.59 7.54 31.18 0.24 0.83 16 16 C -0.14 0.12 10.48 23.64 0.25 0.37 16 17 C -0.06 0.04 6.18 24.76 0.15 0.19 16 18 C -0.03 0.12 2.97 71.24 0.21 0.33 16 19 O -0.53 0.86 12.88 -148.98 -1.92 -1.06 16 20 Si 0.77 -2.26 32.09 68.60 2.20 -0.05 16 21 O -0.17 -0.35 8.90 4.45 0.04 -0.31 16 22 H 0.10 -0.36 8.14 -2.39 -0.02 -0.38 16 23 H 0.09 0.18 8.08 -2.39 -0.02 0.16 16 24 H 0.10 0.12 8.08 -2.39 -0.02 0.10 16 25 H 0.41 -2.51 7.64 -92.71 -0.71 -3.22 16 26 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 27 H 0.05 0.15 8.14 -2.38 -0.02 0.13 16 28 H 0.08 -0.66 8.14 -2.39 -0.02 -0.68 16 29 H 0.09 -0.89 7.88 -2.39 -0.02 -0.91 16 30 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 31 H 0.12 -1.16 8.10 -2.39 -0.02 -1.18 16 32 H 0.12 -0.94 7.92 -2.38 -0.02 -0.96 16 33 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 34 H 0.18 -1.11 7.74 -2.91 -0.02 -1.13 16 35 H 0.16 -1.31 7.96 -2.39 -0.02 -1.33 16 36 H 0.39 -2.38 8.70 -74.06 -0.64 -3.03 16 37 H -0.28 -0.77 7.11 99.48 0.71 -0.06 16 38 H -0.30 -1.10 7.11 99.48 0.71 -0.40 16 Total: 0.00 -18.68 329.41 1.48 -17.20 By element: Atomic # 1 Polarization: -13.59 SS G_CDS: -0.23 Total: -13.82 kcal Atomic # 6 Polarization: 5.54 SS G_CDS: 3.26 Total: 8.81 kcal Atomic # 7 Polarization: 0.22 SS G_CDS: -2.59 Total: -2.37 kcal Atomic # 8 Polarization: -7.18 SS G_CDS: -1.94 Total: -9.13 kcal Atomic # 9 Polarization: -1.42 SS G_CDS: 0.78 Total: -0.64 kcal Atomic # 14 Polarization: -2.26 SS G_CDS: 2.20 Total: -0.05 kcal Total: -18.68 1.48 -17.20 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13308374.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.153 kcal (2) G-P(sol) polarization free energy of solvation -18.683 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.837 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.484 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.199 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.352 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds