Wall clock time and date at job start Sun Mar 7 2021 02:34:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86298 * 109.46895 * 2 1 4 4 C 1.50698 * 109.47271 * 119.99967 * 2 1 3 5 5 C 1.38500 * 119.80386 * 245.00168 * 4 2 1 6 6 C 1.37832 * 120.29900 * 179.97438 * 5 4 2 7 7 C 1.39671 * 119.90643 * 359.97438 * 6 5 4 8 8 C 1.47536 * 120.19148 * 180.02562 * 7 6 5 9 9 O 1.21588 * 120.00363 * 179.97438 * 8 7 6 10 10 N 1.34779 * 120.00041 * 359.97438 * 8 7 6 11 11 C 1.46495 * 120.00163 * 179.97438 * 10 8 7 12 12 C 1.53007 * 109.47226 * 180.02562 * 11 10 8 13 13 C 1.53000 * 109.47069 * 180.02562 * 12 11 10 14 14 H 1.09002 * 112.85194 * 316.19187 * 13 12 11 15 15 C 1.53777 * 113.61306 * 87.50209 * 13 12 11 16 16 C 1.53785 * 87.08113 * 139.98070 * 15 13 12 17 17 H 1.08999 * 113.61353 * 220.01708 * 16 15 13 18 18 F 1.39895 * 113.69182 * 89.12779 * 16 15 13 19 19 C 1.53775 * 87.07998 * 334.56533 * 16 15 13 20 20 C 1.40168 * 119.61812 * 359.97438 * 7 6 5 21 21 O 1.35655 * 120.14975 * 180.02562 * 20 7 6 22 22 C 1.38094 * 119.80350 * 65.23495 * 4 2 1 23 23 H 0.96705 * 114.00545 * 60.00146 * 1 2 3 24 24 H 1.09002 * 109.47062 * 240.00585 * 2 1 3 25 25 H 1.48500 * 110.00117 * 298.68190 * 3 2 1 26 26 H 1.48499 * 110.00230 * 60.00095 * 3 2 1 27 27 H 1.08001 * 119.85260 * 359.97438 * 5 4 2 28 28 H 1.07999 * 120.05012 * 179.97438 * 6 5 4 29 29 H 0.97002 * 119.99602 * 359.97438 * 10 8 7 30 30 H 1.09003 * 109.47098 * 299.99958 * 11 10 8 31 31 H 1.08999 * 109.46930 * 60.00309 * 11 10 8 32 32 H 1.09003 * 109.46917 * 299.99909 * 12 11 10 33 33 H 1.08999 * 109.47044 * 60.00220 * 12 11 10 34 34 H 1.09003 * 113.61533 * 254.52765 * 15 13 12 35 35 H 1.08997 * 113.61652 * 25.43227 * 15 13 12 36 36 H 1.09004 * 113.61739 * 270.88510 * 19 16 15 37 37 H 1.08999 * 113.69009 * 139.99017 * 19 16 15 38 38 H 0.96700 * 114.00230 * 90.00129 * 21 20 7 39 39 H 1.08006 * 119.95902 * 0.04396 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6396 -0.0069 2.1905 6 6 3.1034 -0.6463 3.3200 7 6 2.8581 -2.0097 3.4987 8 6 3.3511 -2.7003 4.7057 9 8 3.1352 -3.8871 4.8580 10 7 4.0408 -2.0156 5.6395 11 6 4.5298 -2.7012 6.8382 12 6 5.2739 -1.7037 7.7285 13 6 5.7852 -2.4199 8.9801 14 1 5.0442 -3.0893 9.4172 15 6 7.1695 -3.0645 8.7987 16 6 7.4942 -2.5808 10.2219 17 1 8.5097 -2.2005 10.3327 18 9 7.1452 -3.4966 11.2202 19 6 6.4444 -1.4789 10.0023 20 6 2.1400 -2.7178 2.5253 21 8 1.8951 -4.0421 2.6881 22 6 1.6869 -2.0599 1.3917 23 1 -0.3934 0.4417 -0.7651 24 1 1.7923 -0.5138 -0.8901 25 1 1.5877 2.4586 -1.2242 26 1 1.5614 2.4679 1.2085 27 1 2.8295 1.0474 2.0535 28 1 3.6556 -0.0940 4.0659 29 1 4.2133 -1.0688 5.5178 30 1 3.6861 -3.1189 7.3876 31 1 5.2070 -3.5040 6.5467 32 1 6.1176 -1.2856 7.1793 33 1 4.5964 -0.9011 8.0199 34 1 7.1367 -4.1499 8.7033 35 1 7.7749 -2.5889 8.0271 36 1 6.8515 -0.5697 9.5597 37 1 5.8254 -1.2830 10.8778 38 1 1.0696 -4.2352 3.1531 39 1 1.1377 -2.6026 0.6365 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13422076.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:16 Heat of formation + Delta-G solvation = -107.096634 kcal Electronic energy + Delta-G solvation = -23045.181644 eV Core-core repulsion = 19255.746606 eV Total energy + Delta-G solvation = -3789.435038 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -48.60562 -41.56132 -40.03336 -39.35105 -38.38597 -37.29440 -35.96927 -33.30637 -31.50637 -31.09607 -27.74810 -26.98153 -25.82945 -23.89506 -23.38031 -22.80291 -21.51687 -20.54202 -19.32902 -18.69679 -18.60022 -17.64345 -17.26900 -16.89822 -16.74785 -16.51198 -16.26545 -16.14722 -15.80909 -15.61795 -15.53286 -15.14199 -14.66612 -14.46268 -14.08958 -14.00538 -13.78665 -13.64041 -13.33125 -13.20008 -12.92684 -12.65823 -12.56115 -12.14355 -12.08157 -11.91354 -11.61592 -11.31701 -11.18961 -10.73087 -10.63704 -10.17361 -10.00409 -9.75664 -5.08635 -0.37963 0.13282 1.12153 1.47672 1.77972 1.83580 2.08866 2.57663 3.11261 3.15700 3.18116 3.20354 3.46622 3.52885 3.59828 3.65149 3.71512 3.75271 3.96715 4.05595 4.16702 4.18020 4.22055 4.31386 4.46052 4.51628 4.56355 4.65253 4.69309 4.71869 4.80305 4.90434 4.97212 4.98326 5.02283 5.15041 5.23855 5.35731 5.39240 5.54097 6.28779 6.45769 6.73171 7.24624 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.083 4.083 3 Si 0.688 3.312 4 C -0.029 4.029 5 C -0.134 4.134 6 C -0.065 4.065 7 C -0.165 4.165 8 C 0.558 3.442 9 O -0.518 6.518 10 N -0.730 5.730 11 C 0.120 3.880 12 C -0.121 4.121 13 C -0.107 4.107 14 H 0.099 0.901 15 C -0.160 4.160 16 C 0.061 3.939 17 H 0.096 0.904 18 F -0.197 7.197 19 C -0.157 4.157 20 C 0.173 3.827 21 O -0.476 6.476 22 C -0.128 4.128 23 H 0.383 0.617 24 H 0.082 0.918 25 H -0.259 1.259 26 H -0.253 1.253 27 H 0.136 0.864 28 H 0.135 0.865 29 H 0.399 0.601 30 H 0.069 0.931 31 H 0.071 0.929 32 H 0.074 0.926 33 H 0.074 0.926 34 H 0.082 0.918 35 H 0.100 0.900 36 H 0.100 0.900 37 H 0.081 0.919 38 H 0.398 0.602 39 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.486 6.304 -1.897 7.037 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.192 4.192 3 Si 0.589 3.411 4 C -0.030 4.030 5 C -0.152 4.152 6 C -0.083 4.083 7 C -0.168 4.168 8 C 0.345 3.655 9 O -0.394 6.394 10 N -0.384 5.384 11 C -0.003 4.003 12 C -0.159 4.159 13 C -0.126 4.126 14 H 0.117 0.883 15 C -0.197 4.197 16 C 0.025 3.975 17 H 0.114 0.886 18 F -0.178 7.178 19 C -0.195 4.195 20 C 0.126 3.874 21 O -0.288 6.288 22 C -0.146 4.146 23 H 0.231 0.769 24 H 0.100 0.900 25 H -0.184 1.184 26 H -0.177 1.177 27 H 0.153 0.847 28 H 0.152 0.848 29 H 0.234 0.766 30 H 0.088 0.912 31 H 0.089 0.911 32 H 0.092 0.908 33 H 0.093 0.907 34 H 0.101 0.899 35 H 0.119 0.881 36 H 0.118 0.882 37 H 0.100 0.900 38 H 0.257 0.743 39 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 2.728 5.841 -1.472 6.612 hybrid contribution -1.498 0.282 -0.311 1.556 sum 1.230 6.123 -1.783 6.495 Atomic orbital electron populations 1.86581 1.17386 1.80300 1.49949 1.24903 0.84850 1.11401 0.98092 0.94946 0.91526 0.74157 0.80496 1.19306 0.95828 0.93292 0.94526 1.20921 1.00131 1.00057 0.94082 1.21109 0.97507 0.92542 0.97191 1.20412 1.05569 0.94424 0.96440 1.18038 0.78350 0.86646 0.82477 1.90841 1.56362 1.14585 1.77571 1.45920 1.57358 1.13366 1.21714 1.21383 0.98589 0.95448 0.84904 1.21779 1.00486 0.98181 0.95417 1.22509 0.96742 0.97956 0.95372 0.88272 1.23689 0.97135 1.02671 0.96249 1.22377 0.99436 0.89334 0.86373 0.88576 1.92829 1.93797 1.68412 1.62737 1.23614 0.98003 0.97646 1.00249 1.18470 0.93785 0.83501 0.91656 1.84750 1.46206 1.17978 1.79822 1.21318 1.00795 0.93960 0.98555 0.76893 0.90048 1.18436 1.17741 0.84651 0.84778 0.76599 0.91231 0.91089 0.90776 0.90735 0.89946 0.88139 0.88171 0.89998 0.74336 0.84322 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.06 12.81 -35.23 -0.45 -0.52 16 2 C -0.08 0.10 2.78 36.00 0.10 0.20 16 3 Si 0.69 -1.55 29.83 -169.99 -5.07 -6.62 16 4 C -0.03 -0.01 5.39 -104.58 -0.56 -0.57 16 5 C -0.13 0.14 8.64 -39.63 -0.34 -0.21 16 6 C -0.06 0.07 9.54 -39.20 -0.37 -0.30 16 7 C -0.16 -0.26 5.89 -104.85 -0.62 -0.88 16 8 C 0.56 1.60 7.76 -12.47 -0.10 1.50 16 9 O -0.52 -3.46 15.16 -16.59 -0.25 -3.72 16 10 N -0.73 0.40 5.51 -61.35 -0.34 0.06 16 11 C 0.12 -0.08 5.66 -4.04 -0.02 -0.11 16 12 C -0.12 0.38 5.17 -26.73 -0.14 0.24 16 13 C -0.11 0.22 3.63 -89.81 -0.33 -0.11 16 14 H 0.10 -0.10 8.13 -51.93 -0.42 -0.52 16 15 C -0.16 0.30 7.53 -25.92 -0.20 0.10 16 16 C 0.06 -0.06 5.69 -25.92 -0.15 -0.20 16 17 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 18 F -0.20 -0.51 17.39 2.25 0.04 -0.47 16 19 C -0.16 0.36 7.54 -25.92 -0.20 0.17 16 20 C 0.17 0.43 6.72 -38.70 -0.26 0.17 16 21 O -0.48 -1.58 11.58 -40.54 -0.47 -2.05 16 22 C -0.13 -0.17 9.60 -39.47 -0.38 -0.55 16 23 H 0.38 -1.46 8.74 45.56 0.40 -1.06 16 24 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 25 H -0.26 0.01 7.11 56.52 0.40 0.41 16 26 H -0.25 -0.13 7.04 56.52 0.40 0.27 16 27 H 0.14 -0.42 4.83 -52.49 -0.25 -0.67 16 28 H 0.13 -0.60 6.40 -52.49 -0.34 -0.94 16 29 H 0.40 -1.40 6.50 -40.82 -0.27 -1.67 16 30 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 31 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 32 H 0.07 -0.30 7.84 -51.93 -0.41 -0.71 16 33 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 34 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 35 H 0.10 -0.33 7.89 -51.93 -0.41 -0.74 16 36 H 0.10 -0.38 8.10 -51.93 -0.42 -0.81 16 37 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 38 H 0.40 -0.09 9.06 45.56 0.41 0.32 16 39 H 0.14 0.10 8.06 -52.48 -0.42 -0.32 16 LS Contribution 330.33 15.07 4.98 4.98 Total: 0.00 -9.71 330.33 -9.40 -19.11 By element: Atomic # 1 Polarization: -5.96 SS G_CDS: -4.28 Total: -10.23 kcal Atomic # 6 Polarization: 3.01 SS G_CDS: -3.56 Total: -0.54 kcal Atomic # 7 Polarization: 0.40 SS G_CDS: -0.34 Total: 0.06 kcal Atomic # 8 Polarization: -5.11 SS G_CDS: -1.17 Total: -6.28 kcal Atomic # 9 Polarization: -0.51 SS G_CDS: 0.04 Total: -0.47 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.07 Total: -6.62 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -9.71 -9.40 -19.11 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13422076.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.990 kcal (2) G-P(sol) polarization free energy of solvation -9.708 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.698 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.398 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.107 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.097 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds