Wall clock time and date at job start Sun Mar 7 2021 02:34:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.37794 * 119.84947 * 2 1 4 4 C 1.39712 * 119.90616 * 180.30040 * 3 2 1 5 5 C 1.47535 * 120.18976 * 179.70145 * 4 3 2 6 6 O 1.21595 * 119.99815 * 179.72293 * 5 4 3 7 7 N 1.34769 * 120.00320 * 359.71711 * 5 4 3 8 8 C 1.46500 * 120.00241 * 180.02562 * 7 5 4 9 9 C 1.53006 * 109.46998 * 180.02562 * 8 7 5 10 10 C 1.52999 * 109.46626 * 179.97438 * 9 8 7 11 11 H 1.08998 * 112.85433 * 316.19520 * 10 9 8 12 12 C 1.53780 * 113.61156 * 87.50652 * 10 9 8 13 13 C 1.53789 * 87.08347 * 139.97730 * 12 10 9 14 14 H 1.08998 * 113.61259 * 220.01705 * 13 12 10 15 15 F 1.39898 * 113.61254 * 89.11575 * 13 12 10 16 16 C 1.53784 * 87.07690 * 334.56585 * 13 12 10 17 17 C 1.40136 * 119.61526 * 359.42268 * 4 3 2 18 18 O 1.35654 * 120.14896 * 180.29981 * 17 4 3 19 19 C 1.38713 * 119.70369 * 0.27766 * 17 4 3 20 20 C 1.50693 * 119.96144 * 180.02562 * 19 17 4 21 21 O 1.42902 * 109.47267 * 74.99568 * 20 19 17 22 22 Si 1.86294 * 109.47204 * 194.99919 * 20 19 17 23 23 C 1.38054 * 120.07957 * 0.02562 * 19 17 4 24 24 H 1.09000 * 109.46917 * 270.30113 * 1 2 3 25 25 H 1.09000 * 109.46626 * 30.29964 * 1 2 3 26 26 H 1.08996 * 109.46987 * 150.29562 * 1 2 3 27 27 H 1.08001 * 120.04913 * 0.02562 * 3 2 1 28 28 H 0.97010 * 119.99849 * 0.02562 * 7 5 4 29 29 H 1.09000 * 109.47175 * 60.00333 * 8 7 5 30 30 H 1.09001 * 109.47297 * 299.99840 * 8 7 5 31 31 H 1.08993 * 109.46955 * 300.00226 * 9 8 7 32 32 H 1.09000 * 109.47050 * 60.00054 * 9 8 7 33 33 H 1.09003 * 113.61649 * 254.52794 * 12 10 9 34 34 H 1.08998 * 113.61947 * 25.43097 * 12 10 9 35 35 H 1.09001 * 113.61609 * 270.88057 * 16 13 12 36 36 H 1.09002 * 113.68788 * 139.99411 * 16 13 12 37 37 H 0.96703 * 113.99867 * 90.00300 * 18 17 4 38 38 H 1.08996 * 109.46990 * 315.00269 * 20 19 17 39 39 H 0.96705 * 113.99111 * 60.00310 * 21 20 19 40 40 H 1.48495 * 109.99925 * 58.68183 * 22 20 19 41 41 H 1.48502 * 110.00258 * 179.97438 * 22 20 19 42 42 H 1.08002 * 119.80110 * 180.02562 * 23 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5899 1.1965 -0.0063 5 6 4.3305 2.4725 -0.0130 6 8 5.5465 2.4697 -0.0135 7 7 3.6594 3.6412 -0.0188 8 6 4.3949 4.9082 -0.0260 9 6 3.4033 6.0734 -0.0309 10 6 4.1714 7.3966 -0.0377 11 1 5.0113 7.4021 0.6569 12 6 4.5327 7.8918 -1.4481 13 6 4.1845 9.3064 -0.9553 14 1 3.6480 9.9053 -1.6912 15 9 5.2683 9.9843 -0.3871 16 6 3.2667 8.6347 0.0797 17 6 4.2837 -0.0210 -0.0004 18 8 5.6402 -0.0323 -0.0003 19 6 3.5771 -1.2147 0.0059 20 6 4.3172 -2.5273 0.0129 21 8 4.8550 -2.7641 1.3155 22 14 3.1445 -3.9039 -0.4345 23 6 2.1966 -1.2016 0.0057 24 1 -0.3633 0.0054 1.0277 25 1 -0.3632 0.8873 -0.5185 26 1 -0.3633 -0.8926 -0.5092 27 1 1.6512 2.1295 0.0004 28 1 2.6893 3.6435 -0.0182 29 1 5.0210 4.9598 -0.9167 30 1 5.0223 4.9693 0.8633 31 1 2.7756 6.0126 -0.9198 32 1 2.7774 6.0217 0.8601 33 1 5.5856 7.7638 -1.6995 34 1 3.8631 7.5231 -2.2252 35 1 2.2511 8.4690 -0.2796 36 1 3.2965 9.1055 1.0624 37 1 6.0335 -0.0313 0.8831 38 1 5.1287 -2.4907 -0.7139 39 1 4.1878 -2.8090 2.0141 40 1 2.5543 -3.6532 -1.7738 41 1 3.8624 -5.2039 -0.4317 42 1 1.6510 -2.1337 0.0110 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13422088.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:20 Heat of formation + Delta-G solvation = -115.837052 kcal Electronic energy + Delta-G solvation = -25261.036258 eV Core-core repulsion = 21315.684588 eV Total energy + Delta-G solvation = -3945.351670 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -48.61761 -41.71593 -40.15027 -39.38081 -38.02280 -37.63552 -35.99208 -33.31238 -33.11605 -31.44445 -27.71254 -27.04466 -26.82617 -26.44326 -24.48861 -22.95831 -22.03710 -21.42067 -20.53408 -19.57647 -18.38211 -18.01653 -17.45038 -17.25362 -16.95037 -16.80323 -16.58110 -16.26114 -16.09872 -15.88291 -15.57212 -15.42055 -14.95983 -14.80419 -14.64054 -14.48685 -14.20176 -13.82214 -13.79334 -13.64542 -13.38210 -13.19025 -13.09674 -12.74380 -12.58980 -12.15517 -12.13692 -12.06228 -11.92843 -11.69560 -11.33191 -11.20769 -10.81621 -10.42256 -10.23953 -10.03853 -9.55397 -5.11181 -0.36323 0.01254 1.21369 1.59349 1.76593 1.93270 2.07882 2.56616 3.14239 3.18712 3.18738 3.35664 3.45105 3.46820 3.51239 3.58206 3.60886 3.72779 3.94460 4.01559 4.05840 4.13207 4.25566 4.29402 4.44144 4.45867 4.50015 4.52129 4.53171 4.63484 4.67121 4.69817 4.78898 4.87548 4.88919 4.92552 4.96515 5.00777 5.15002 5.26147 5.34167 5.36903 5.53873 6.43465 6.50296 6.77135 7.22781 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.098 4.098 3 C -0.068 4.068 4 C -0.164 4.164 5 C 0.557 3.443 6 O -0.517 6.517 7 N -0.730 5.730 8 C 0.120 3.880 9 C -0.121 4.121 10 C -0.107 4.107 11 H 0.099 0.901 12 C -0.160 4.160 13 C 0.061 3.939 14 H 0.097 0.903 15 F -0.197 7.197 16 C -0.157 4.157 17 C 0.191 3.809 18 O -0.473 6.473 19 C -0.153 4.153 20 C -0.063 4.063 21 O -0.537 6.537 22 Si 0.685 3.315 23 C -0.073 4.073 24 H 0.077 0.923 25 H 0.070 0.930 26 H 0.072 0.928 27 H 0.131 0.869 28 H 0.398 0.602 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.073 0.927 32 H 0.074 0.926 33 H 0.082 0.918 34 H 0.100 0.900 35 H 0.100 0.900 36 H 0.082 0.918 37 H 0.400 0.600 38 H 0.119 0.881 39 H 0.377 0.623 40 H -0.256 1.256 41 H -0.252 1.252 42 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.277 0.118 2.078 9.508 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.098 4.098 3 C -0.086 4.086 4 C -0.168 4.168 5 C 0.344 3.656 6 O -0.392 6.392 7 N -0.384 5.384 8 C -0.003 4.003 9 C -0.158 4.158 10 C -0.126 4.126 11 H 0.118 0.882 12 C -0.198 4.198 13 C 0.025 3.975 14 H 0.114 0.886 15 F -0.178 7.178 16 C -0.195 4.195 17 C 0.144 3.856 18 O -0.285 6.285 19 C -0.154 4.154 20 C -0.173 4.173 21 O -0.342 6.342 22 Si 0.586 3.414 23 C -0.091 4.091 24 H 0.095 0.905 25 H 0.089 0.911 26 H 0.091 0.909 27 H 0.149 0.851 28 H 0.233 0.767 29 H 0.089 0.911 30 H 0.088 0.912 31 H 0.092 0.908 32 H 0.093 0.907 33 H 0.101 0.899 34 H 0.118 0.882 35 H 0.118 0.882 36 H 0.100 0.900 37 H 0.259 0.741 38 H 0.136 0.864 39 H 0.224 0.776 40 H -0.180 1.180 41 H -0.176 1.176 42 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -8.010 -0.496 0.586 8.047 hybrid contribution 0.109 0.608 0.262 0.671 sum -7.901 0.112 0.848 7.947 Atomic orbital electron populations 1.20839 0.89923 1.03532 1.03050 1.19802 0.96817 0.92245 1.00926 1.21123 0.92096 0.98295 0.97136 1.20396 0.93969 0.93480 1.08968 1.18032 0.87318 0.83335 0.76866 1.90849 1.13013 1.87288 1.48090 1.45919 1.10291 1.05731 1.76420 1.21385 0.94695 0.81361 1.02883 1.21775 0.97957 0.93023 1.03081 1.22510 0.99017 0.93243 0.97805 0.88242 1.23694 1.03749 0.94794 0.97554 1.22379 0.85914 0.92837 0.96373 0.88558 1.92830 1.56958 1.81484 1.86485 1.23614 0.99010 0.96391 1.00476 1.18235 0.83999 0.89709 0.93692 1.84680 1.14154 1.95863 1.33756 1.20708 0.94047 0.95846 1.04802 1.25020 1.04358 0.98747 0.89200 1.86547 1.37217 1.94453 1.15988 0.95165 0.83154 0.77519 0.85572 1.20987 0.92573 0.97959 0.97547 0.90457 0.91114 0.90904 0.85132 0.76654 0.91140 0.91183 0.90835 0.90721 0.89945 0.88181 0.88184 0.89966 0.74082 0.86350 0.77591 1.18010 1.17649 0.84580 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.49 10.00 36.01 0.36 0.85 16 2 C -0.10 0.19 5.87 -104.67 -0.61 -0.42 16 3 C -0.07 0.09 9.18 -39.19 -0.36 -0.27 16 4 C -0.16 -0.26 5.89 -104.84 -0.62 -0.88 16 5 C 0.56 1.69 7.76 -12.47 -0.10 1.59 16 6 O -0.52 -3.60 15.16 -16.60 -0.25 -3.85 16 7 N -0.73 0.30 5.51 -61.35 -0.34 -0.04 16 8 C 0.12 -0.07 5.66 -4.04 -0.02 -0.09 16 9 C -0.12 0.37 5.16 -26.73 -0.14 0.23 16 10 C -0.11 0.21 3.63 -89.81 -0.33 -0.11 16 11 H 0.10 -0.10 8.13 -51.93 -0.42 -0.52 16 12 C -0.16 0.28 7.53 -25.91 -0.20 0.08 16 13 C 0.06 -0.05 5.69 -25.91 -0.15 -0.20 16 14 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 15 F -0.20 -0.52 17.38 2.25 0.04 -0.48 16 16 C -0.16 0.36 7.54 -25.91 -0.20 0.16 16 17 C 0.19 0.47 6.69 -38.69 -0.26 0.21 16 18 O -0.47 -1.89 10.91 -40.54 -0.44 -2.33 16 19 C -0.15 -0.06 5.27 -104.52 -0.55 -0.62 16 20 C -0.06 -0.02 2.38 36.00 0.09 0.07 16 21 O -0.54 -0.02 12.88 -35.23 -0.45 -0.47 16 22 Si 0.68 -0.81 29.91 -169.99 -5.08 -5.90 16 23 C -0.07 0.11 8.30 -39.53 -0.33 -0.21 16 24 H 0.08 -0.38 8.14 -51.93 -0.42 -0.81 16 25 H 0.07 -0.33 8.08 -51.93 -0.42 -0.75 16 26 H 0.07 -0.34 8.08 -51.93 -0.42 -0.76 16 27 H 0.13 -0.55 6.40 -52.49 -0.34 -0.88 16 28 H 0.40 -1.33 6.50 -40.82 -0.27 -1.60 16 29 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 30 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 31 H 0.07 -0.29 7.84 -51.93 -0.41 -0.69 16 32 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 33 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 34 H 0.10 -0.31 7.90 -51.93 -0.41 -0.72 16 35 H 0.10 -0.38 8.10 -51.93 -0.42 -0.80 16 36 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.40 0.50 9.06 45.56 0.41 0.91 16 38 H 0.12 0.24 7.83 -51.93 -0.41 -0.16 16 39 H 0.38 -1.58 8.70 45.56 0.40 -1.19 16 40 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 41 H -0.25 -0.56 7.11 56.52 0.40 -0.15 16 42 H 0.14 -0.56 5.10 -52.49 -0.27 -0.83 16 LS Contribution 351.23 15.07 5.29 5.29 Total: 0.00 -9.64 351.23 -9.77 -19.40 By element: Atomic # 1 Polarization: -6.91 SS G_CDS: -5.12 Total: -12.03 kcal Atomic # 6 Polarization: 3.81 SS G_CDS: -3.41 Total: 0.41 kcal Atomic # 7 Polarization: 0.30 SS G_CDS: -0.34 Total: -0.04 kcal Atomic # 8 Polarization: -5.51 SS G_CDS: -1.15 Total: -6.66 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.04 Total: -0.48 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.08 Total: -5.90 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -9.64 -9.77 -19.40 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13422088.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.434 kcal (2) G-P(sol) polarization free energy of solvation -9.638 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.072 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.765 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.403 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.837 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds