Wall clock time and date at job start Sun Mar 7 2021 02:34:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39055 * 110.99854 * 236.04434 * 2 1 3 5 5 C 1.39189 * 119.93336 * 239.73141 * 4 2 1 6 6 C 1.50699 * 119.96513 * 359.97438 * 5 4 2 7 7 O 1.42897 * 109.46965 * 75.00563 * 6 5 4 8 8 Si 1.86299 * 109.47243 * 195.00125 * 6 5 4 9 9 C 1.37634 * 120.06841 * 179.72480 * 5 4 2 10 10 C 1.39773 * 119.92800 * 0.54663 * 9 5 4 11 11 C 1.47523 * 120.06701 * 179.74343 * 10 9 5 12 12 O 1.21593 * 120.00052 * 359.97438 * 11 10 9 13 13 N 1.34777 * 119.99932 * 179.97438 * 11 10 9 14 14 C 1.46501 * 120.00083 * 180.02562 * 13 11 10 15 15 C 1.53002 * 109.47212 * 180.02562 * 14 13 11 16 16 C 1.52992 * 109.47105 * 179.97438 * 15 14 13 17 17 H 1.09005 * 112.84984 * 314.66627 * 16 15 14 18 18 C 1.53784 * 113.61606 * 85.86193 * 16 15 14 19 19 C 1.53952 * 87.02138 * 139.95453 * 18 16 15 20 20 H 1.09004 * 113.66798 * 220.07297 * 19 18 16 21 21 F 1.39896 * 113.61784 * 89.19988 * 19 18 16 22 22 C 1.53783 * 113.61666 * 183.46811 * 16 15 14 23 23 C 1.39813 * 119.86667 * 359.72615 * 10 9 5 24 24 C 1.37595 * 119.92779 * 359.97438 * 23 10 9 25 25 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 26 26 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 27 27 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 28 28 H 1.09006 * 109.46770 * 56.04400 * 3 2 1 29 29 H 1.09001 * 109.47456 * 176.04615 * 3 2 1 30 30 H 1.09000 * 109.46814 * 296.04921 * 3 2 1 31 31 H 1.08996 * 109.47294 * 315.00141 * 6 5 4 32 32 H 0.96698 * 114.00230 * 179.97438 * 7 6 5 33 33 H 1.48503 * 110.00066 * 178.68113 * 8 6 5 34 34 H 1.48496 * 110.00058 * 300.00667 * 8 6 5 35 35 H 1.08001 * 120.03741 * 180.24820 * 9 5 4 36 36 H 0.97002 * 119.99714 * 0.02562 * 13 11 10 37 37 H 1.09000 * 109.46687 * 300.00017 * 14 13 11 38 38 H 1.08995 * 109.47281 * 59.99864 * 14 13 11 39 39 H 1.08995 * 109.46857 * 299.99789 * 15 14 13 40 40 H 1.08995 * 109.47127 * 59.99747 * 15 14 13 41 41 H 1.09004 * 113.61701 * 254.53203 * 18 16 15 42 42 H 1.09002 * 113.61206 * 25.43218 * 18 16 15 43 43 H 1.09000 * 113.60939 * 334.57198 * 22 16 15 44 44 H 1.09001 * 113.61251 * 105.38323 * 22 16 15 45 45 H 1.07994 * 120.03772 * 180.02562 * 23 10 9 46 46 H 1.07994 * 119.96428 * 179.97438 * 24 23 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7251 -1.0768 5 6 2.7838 -1.8297 -0.8521 6 6 3.1270 -2.2377 0.5575 7 8 1.9958 -2.8707 1.1588 8 14 4.5610 -3.4265 0.5282 9 6 3.2739 -2.5528 -1.9157 10 6 2.9602 -2.1700 -3.2228 11 6 3.4885 -2.9395 -4.3653 12 8 4.1980 -3.9075 -4.1703 13 7 3.1848 -2.5694 -5.6251 14 6 3.7089 -3.3339 -6.7597 15 6 3.2185 -2.7077 -8.0667 16 6 3.7664 -3.5057 -9.2515 17 1 4.8253 -3.7432 -9.1484 18 6 2.8980 -4.7159 -9.6336 19 6 3.1757 -4.3497 -11.1029 20 1 2.3084 -4.4625 -11.7535 21 9 4.3266 -4.9518 -11.6226 22 6 3.3998 -2.9071 -10.6198 23 6 2.1445 -1.0566 -3.4455 24 6 1.6526 -0.3415 -2.3778 25 1 -0.3634 -1.0252 0.0708 26 1 -0.3633 0.4513 -0.9233 27 1 -0.3633 0.5740 0.8525 28 1 1.5899 1.9163 0.8525 29 1 3.0829 1.3431 0.0709 30 1 1.7045 1.8723 -0.9233 31 1 3.3990 -1.3545 1.1354 32 1 2.1451 -3.1607 2.0692 33 1 4.9297 -3.8119 1.9142 34 1 4.2030 -4.6351 -0.2568 35 1 3.9042 -3.4122 -1.7406 36 1 2.6191 -1.7969 -5.7807 37 1 4.7986 -3.3180 -6.7360 38 1 3.3591 -4.3642 -6.6962 39 1 2.1289 -2.7232 -8.0906 40 1 3.5687 -1.6775 -8.1299 41 1 3.3253 -5.6725 -9.3328 42 1 1.8515 -4.6100 -9.3475 43 1 2.4908 -2.3057 -10.6038 44 1 4.2314 -2.4041 -11.1133 45 1 1.9000 -0.7586 -4.4543 46 1 1.0227 0.5189 -2.5491 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_13422196.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:23 Heat of formation + Delta-G solvation = -48.898915 kcal Electronic energy + Delta-G solvation = -26999.337589 eV Core-core repulsion = 22999.069618 eV Total energy + Delta-G solvation = -4000.267971 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.168 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -48.66917 -41.67894 -40.47624 -39.35208 -37.84832 -37.29983 -36.22252 -33.20876 -32.00668 -30.92408 -28.50182 -26.97198 -26.90578 -26.67104 -25.22295 -23.23206 -22.91574 -22.67380 -21.15027 -20.38940 -18.92547 -18.50169 -17.85622 -17.48933 -17.21189 -16.83181 -16.68429 -16.40330 -16.21117 -15.99253 -15.88134 -15.60366 -15.41699 -15.09542 -14.99648 -14.58177 -14.54350 -14.04434 -13.84103 -13.76960 -13.65690 -13.45174 -13.32441 -13.09449 -13.01557 -12.72063 -12.60703 -12.51632 -12.11737 -11.97225 -11.93161 -11.81118 -11.30199 -11.17394 -10.92525 -10.41636 -10.28445 -10.11319 -9.77577 -9.48059 -5.00498 -0.38024 0.14731 1.25268 1.49948 1.63749 1.88655 2.02941 2.60594 2.81288 3.28704 3.35586 3.38068 3.60641 3.61625 3.73050 3.75901 3.78821 3.88456 4.05730 4.10918 4.15683 4.24715 4.26140 4.40182 4.44109 4.47332 4.49279 4.60250 4.63307 4.68515 4.72385 4.74299 4.81791 4.83044 4.93957 4.98875 5.02055 5.03236 5.05666 5.11391 5.15571 5.19810 5.25428 5.33822 5.50379 5.56241 5.88832 6.29319 6.42884 6.63892 7.09916 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 N -0.522 5.522 3 C 0.024 3.976 4 C 0.139 3.861 5 C -0.076 4.076 6 C -0.048 4.048 7 O -0.546 6.546 8 Si 0.728 3.272 9 C -0.069 4.069 10 C -0.150 4.150 11 C 0.555 3.445 12 O -0.583 6.583 13 N -0.709 5.709 14 C 0.118 3.882 15 C -0.107 4.107 16 C -0.109 4.109 17 H 0.082 0.918 18 C -0.159 4.159 19 C 0.043 3.957 20 H 0.112 0.888 21 F -0.222 7.222 22 C -0.147 4.147 23 C -0.054 4.054 24 C -0.156 4.156 25 H 0.056 0.944 26 H 0.043 0.957 27 H 0.084 0.916 28 H 0.084 0.916 29 H 0.072 0.928 30 H 0.043 0.957 31 H 0.097 0.903 32 H 0.391 0.609 33 H -0.275 1.275 34 H -0.310 1.310 35 H 0.124 0.876 36 H 0.417 0.583 37 H 0.056 0.944 38 H 0.056 0.944 39 H 0.093 0.907 40 H 0.089 0.911 41 H 0.065 0.935 42 H 0.119 0.881 43 H 0.124 0.876 44 H 0.075 0.925 45 H 0.165 0.835 46 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.233 9.231 -1.425 10.255 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 N -0.243 5.243 3 C -0.122 4.122 4 C 0.045 3.955 5 C -0.077 4.077 6 C -0.159 4.159 7 O -0.355 6.355 8 Si 0.635 3.365 9 C -0.088 4.088 10 C -0.153 4.153 11 C 0.343 3.657 12 O -0.465 6.465 13 N -0.361 5.361 14 C -0.006 4.006 15 C -0.144 4.144 16 C -0.128 4.128 17 H 0.100 0.900 18 C -0.196 4.196 19 C 0.007 3.993 20 H 0.130 0.870 21 F -0.203 7.203 22 C -0.184 4.184 23 C -0.073 4.073 24 C -0.176 4.176 25 H 0.075 0.925 26 H 0.061 0.939 27 H 0.103 0.897 28 H 0.103 0.897 29 H 0.091 0.909 30 H 0.061 0.939 31 H 0.115 0.885 32 H 0.241 0.759 33 H -0.201 1.201 34 H -0.239 1.239 35 H 0.142 0.858 36 H 0.255 0.745 37 H 0.074 0.926 38 H 0.074 0.926 39 H 0.111 0.889 40 H 0.108 0.892 41 H 0.084 0.916 42 H 0.138 0.862 43 H 0.142 0.858 44 H 0.093 0.907 45 H 0.182 0.818 46 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -3.521 7.671 -1.248 8.533 hybrid contribution -0.844 -0.304 0.160 0.911 sum -4.366 7.367 -1.088 8.633 Atomic orbital electron populations 1.22434 0.84650 1.02343 1.01966 1.59360 1.09427 1.15039 1.40472 1.22566 1.01268 0.86175 1.02147 1.18958 0.93594 0.93131 0.89862 1.19228 0.99234 0.95518 0.93713 1.24483 0.95697 1.02967 0.92734 1.86539 1.36387 1.79348 1.33218 0.94526 0.82999 0.79825 0.79126 1.21140 0.97775 0.98057 0.91835 1.19822 1.03702 0.99242 0.92578 1.18446 0.79750 0.83494 0.83993 1.90795 1.39822 1.29757 1.86104 1.45773 1.52573 1.33213 1.04586 1.21413 0.98656 0.95494 0.84991 1.21693 1.02261 1.00087 0.90405 1.22469 0.99782 0.96078 0.94464 0.89988 1.23760 1.02623 0.99116 0.94122 1.22776 0.85172 0.95184 0.96128 0.86997 1.92774 1.53768 1.85255 1.88502 1.23603 1.04347 0.95114 0.95345 1.21456 0.93160 0.91807 1.00901 1.21875 1.01877 1.01710 0.92099 0.92499 0.93855 0.89703 0.89716 0.90870 0.93879 0.88534 0.75874 1.20139 1.23869 0.85832 0.74451 0.92575 0.92578 0.88883 0.89230 0.91566 0.86243 0.85782 0.90657 0.81791 0.82834 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.34 127.69 1.19 1.13 16 2 N -0.52 0.16 4.20 -745.08 -3.13 -2.97 16 3 C 0.02 -0.11 9.38 127.69 1.20 1.08 16 4 C 0.14 0.21 4.70 38.47 0.18 0.39 16 5 C -0.08 -0.36 5.30 -19.78 -0.10 -0.47 16 6 C -0.05 -0.15 2.32 71.24 0.17 0.02 16 7 O -0.55 -2.70 12.86 -148.98 -1.92 -4.61 16 8 Si 0.73 2.90 30.20 68.60 2.07 4.98 16 9 C -0.07 -0.49 8.19 22.50 0.18 -0.31 16 10 C -0.15 -0.59 5.88 -20.08 -0.12 -0.70 16 11 C 0.55 3.80 7.76 86.69 0.67 4.48 16 12 O -0.58 -9.66 16.34 -4.01 -0.07 -9.72 16 13 N -0.71 1.09 5.51 -466.28 -2.57 -1.48 16 14 C 0.12 -0.13 5.67 86.38 0.49 0.36 16 15 C -0.11 0.84 5.15 30.59 0.16 0.99 16 16 C -0.11 0.48 3.62 -10.27 -0.04 0.44 16 17 H 0.08 -0.07 8.14 -2.38 -0.02 -0.09 16 18 C -0.16 0.58 7.54 31.18 0.24 0.82 16 19 C 0.04 -0.08 5.69 31.18 0.18 0.10 16 20 H 0.11 -0.61 8.14 -2.39 -0.02 -0.63 16 21 F -0.22 -1.43 17.38 44.97 0.78 -0.64 16 22 C -0.15 0.83 7.54 31.12 0.23 1.07 16 23 C -0.05 0.18 9.53 22.50 0.21 0.40 16 24 C -0.16 0.44 8.53 22.36 0.19 0.63 16 25 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 26 H 0.04 -0.20 7.10 -2.39 -0.02 -0.22 16 27 H 0.08 -0.34 8.12 -2.38 -0.02 -0.36 16 28 H 0.08 -0.52 8.12 -2.38 -0.02 -0.54 16 29 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 30 H 0.04 -0.28 7.32 -2.39 -0.02 -0.30 16 31 H 0.10 0.00 7.78 -2.39 -0.02 -0.02 16 32 H 0.39 -1.04 8.74 -74.06 -0.65 -1.69 16 33 H -0.28 -1.76 7.11 99.48 0.71 -1.05 16 34 H -0.31 -4.21 6.74 99.48 0.67 -3.54 16 35 H 0.12 1.32 4.47 -2.91 -0.01 1.30 16 36 H 0.42 -3.80 6.49 -92.71 -0.60 -4.40 16 37 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 38 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 39 H 0.09 -1.02 7.88 -2.39 -0.02 -1.04 16 40 H 0.09 -0.90 8.14 -2.39 -0.02 -0.91 16 41 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 42 H 0.12 -0.92 7.92 -2.39 -0.02 -0.94 16 43 H 0.12 -1.29 8.10 -2.39 -0.02 -1.31 16 44 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 45 H 0.16 -1.88 6.39 -2.91 -0.02 -1.89 16 46 H 0.15 -1.17 6.99 -2.91 -0.02 -1.19 16 Total: 0.00 -23.22 375.14 -0.04 -23.26 By element: Atomic # 1 Polarization: -18.98 SS G_CDS: -0.25 Total: -19.22 kcal Atomic # 6 Polarization: 5.38 SS G_CDS: 5.03 Total: 10.41 kcal Atomic # 7 Polarization: 1.25 SS G_CDS: -5.70 Total: -4.45 kcal Atomic # 8 Polarization: -12.35 SS G_CDS: -1.98 Total: -14.33 kcal Atomic # 9 Polarization: -1.43 SS G_CDS: 0.78 Total: -0.64 kcal Atomic # 14 Polarization: 2.90 SS G_CDS: 2.07 Total: 4.98 kcal Total: -23.22 -0.04 -23.26 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13422196.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.638 kcal (2) G-P(sol) polarization free energy of solvation -23.223 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.860 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.038 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.261 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.899 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds