Wall clock time and date at job start Sun Mar 7 2021 02:34:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47004 * 2 1 4 4 C 1.50706 * 109.47147 * 240.00515 * 2 1 3 5 5 C 1.32699 * 124.68166 * 299.99819 * 4 2 1 6 6 C 1.44504 * 113.09746 * 179.97438 * 5 4 2 7 7 C 1.47046 * 123.49107 * 179.97438 * 6 5 4 8 8 O 1.21653 * 119.99732 * 179.97438 * 7 6 5 9 9 N 1.34772 * 119.99959 * 0.02562 * 7 6 5 10 10 C 1.46501 * 119.99917 * 179.97438 * 9 7 6 11 11 C 1.53007 * 109.46925 * 179.97438 * 10 9 7 12 12 C 1.53000 * 109.46595 * 179.97438 * 11 10 9 13 13 H 1.09006 * 112.85120 * 45.33700 * 12 11 10 14 14 C 1.53784 * 113.61004 * 176.52829 * 12 11 10 15 15 C 1.53779 * 87.08085 * 139.98202 * 14 12 11 16 16 H 1.08994 * 113.61564 * 219.93528 * 15 14 12 17 17 F 1.39902 * 113.61237 * 89.11458 * 15 14 12 18 18 C 1.53778 * 113.61384 * 274.13370 * 12 11 10 19 19 C 1.36222 * 113.01439 * 359.97438 * 6 5 4 20 20 Cl 1.73607 * 124.60382 * 179.97438 * 19 6 5 21 21 S 1.70447 * 110.79020 * 359.76331 * 19 6 5 22 22 H 0.96695 * 114.00385 * 60.00159 * 1 2 3 23 23 H 1.09001 * 109.47626 * 120.00659 * 2 1 3 24 24 H 1.48504 * 109.99999 * 60.00466 * 3 2 1 25 25 H 1.48504 * 110.00212 * 181.32185 * 3 2 1 26 26 H 1.08000 * 123.44689 * 359.97438 * 5 4 2 27 27 H 0.97003 * 120.00019 * 359.97438 * 9 7 6 28 28 H 1.08991 * 109.47014 * 299.99637 * 10 9 7 29 29 H 1.09000 * 109.47258 * 59.99699 * 10 9 7 30 30 H 1.08999 * 109.47072 * 299.99533 * 11 10 9 31 31 H 1.09000 * 109.47148 * 59.99938 * 11 10 9 32 32 H 1.08998 * 113.61391 * 254.53106 * 14 12 11 33 33 H 1.09002 * 113.61739 * 25.43588 * 14 12 11 34 34 H 1.08997 * 113.61671 * 334.56907 * 18 12 11 35 35 H 1.09006 * 113.60964 * 105.47951 * 18 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 1.6686 -1.9756 -1.5322 6 6 2.2768 -2.4008 -2.7721 7 6 2.1347 -3.7570 -3.3223 8 8 2.6746 -4.0467 -4.3733 9 7 1.4056 -4.6788 -2.6628 10 6 1.2635 -6.0299 -3.2113 11 6 0.3941 -6.8716 -2.2750 12 6 0.2454 -8.2823 -2.8481 13 1 1.1892 -8.6972 -3.2021 14 6 -0.5441 -9.2372 -1.9371 15 6 -1.2042 -9.7836 -3.2141 16 1 -2.2681 -9.9918 -3.1009 17 9 -0.5023 -10.8434 -3.7983 18 6 -0.9051 -8.4182 -3.8595 19 6 2.9954 -1.4151 -3.3784 20 17 3.8492 -1.5979 -4.8789 21 16 2.9375 0.0239 -2.4667 22 1 -0.3934 0.4416 -0.7650 23 1 1.7924 -0.5139 0.8899 24 1 1.5615 2.4679 1.2086 25 1 3.5345 1.7704 -0.0322 26 1 1.0624 -2.6214 -0.9142 27 1 0.9748 -4.4477 -1.8250 28 1 0.7937 -5.9758 -4.1932 29 1 2.2475 -6.4896 -3.3042 30 1 0.8645 -6.9257 -1.2932 31 1 -0.5898 -6.4120 -2.1817 32 1 0.0813 -9.9666 -1.4226 33 1 -1.2396 -8.7285 -1.2695 34 1 -1.6994 -7.6852 -3.7184 35 1 -0.5705 -8.4874 -4.8946 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13431040.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:32 Heat of formation + Delta-G solvation = -68.044309 kcal Electronic energy + Delta-G solvation = -21594.206172 eV Core-core repulsion = 17854.499216 eV Total energy + Delta-G solvation = -3739.706956 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.044 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -48.60411 -40.99651 -39.57261 -38.94445 -37.93005 -37.01193 -36.04172 -32.12127 -31.51952 -27.24874 -26.97940 -26.71241 -24.74103 -22.87454 -22.24663 -20.86406 -20.42507 -19.43027 -18.11097 -17.89968 -17.34759 -16.93781 -16.79456 -16.47770 -16.43434 -15.92546 -15.77241 -15.65545 -15.39740 -14.79703 -14.76293 -14.33740 -14.22216 -14.09570 -13.81079 -13.61925 -13.17310 -13.02229 -12.62293 -12.54661 -12.43277 -12.14720 -12.06030 -11.94157 -11.91601 -11.31843 -11.18739 -10.85788 -10.67495 -10.14487 -9.92559 -9.69855 -5.31997 -0.61601 -0.22869 0.40954 0.67390 1.01676 1.08022 1.42471 1.75173 2.16693 2.28280 3.11550 3.15607 3.20452 3.37075 3.46739 3.56976 3.72634 3.78846 3.84554 3.98983 4.14461 4.20908 4.30256 4.37509 4.46120 4.51862 4.64460 4.65850 4.69336 4.80331 4.86856 4.90325 4.98965 5.03509 5.35747 5.37806 6.28849 6.43143 7.20366 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.024 4.024 3 Si 0.649 3.351 4 C -0.236 4.236 5 C -0.071 4.071 6 C -0.160 4.160 7 C 0.574 3.426 8 O -0.518 6.518 9 N -0.725 5.725 10 C 0.121 3.879 11 C -0.121 4.121 12 C -0.107 4.107 13 H 0.099 0.901 14 C -0.157 4.157 15 C 0.061 3.939 16 H 0.097 0.903 17 F -0.197 7.197 18 C -0.160 4.160 19 C -0.115 4.115 20 Cl 0.027 6.973 21 S 0.237 5.763 22 H 0.383 0.617 23 H 0.128 0.872 24 H -0.228 1.228 25 H -0.233 1.233 26 H 0.157 0.843 27 H 0.400 0.600 28 H 0.071 0.929 29 H 0.070 0.930 30 H 0.074 0.926 31 H 0.073 0.927 32 H 0.081 0.919 33 H 0.100 0.900 34 H 0.100 0.900 35 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.719 3.425 3.490 6.144 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.138 4.138 3 Si 0.548 3.452 4 C -0.354 4.354 5 C -0.100 4.100 6 C -0.178 4.178 7 C 0.359 3.641 8 O -0.394 6.394 9 N -0.378 5.378 10 C -0.003 4.003 11 C -0.159 4.159 12 C -0.126 4.126 13 H 0.117 0.883 14 C -0.195 4.195 15 C 0.025 3.975 16 H 0.114 0.886 17 F -0.178 7.178 18 C -0.197 4.197 19 C -0.261 4.261 20 Cl 0.056 6.944 21 S 0.501 5.499 22 H 0.231 0.769 23 H 0.145 0.855 24 H -0.151 1.151 25 H -0.157 1.157 26 H 0.174 0.826 27 H 0.235 0.765 28 H 0.090 0.910 29 H 0.088 0.912 30 H 0.093 0.907 31 H 0.092 0.908 32 H 0.100 0.900 33 H 0.118 0.882 34 H 0.118 0.882 35 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -2.033 4.884 3.346 6.259 hybrid contribution -0.596 -2.077 0.481 2.214 sum -2.628 2.806 3.826 5.424 Atomic orbital electron populations 1.86532 1.16333 1.81644 1.49299 1.24428 0.85359 1.09150 0.94831 0.95052 0.82424 0.77410 0.90288 1.24809 1.08050 0.99287 1.03212 1.20992 0.99304 0.95041 0.94649 1.20239 1.04529 0.95548 0.97516 1.17394 0.78979 0.83499 0.84197 1.90887 1.46488 1.80112 1.21913 1.45825 1.53244 1.12125 1.26608 1.21388 1.00515 0.80813 0.97544 1.21774 1.00453 0.94463 0.99166 1.22506 0.98754 0.94694 0.96601 0.88281 1.23611 1.00107 0.99295 0.96494 1.22423 0.95839 0.84606 0.94656 0.88560 1.92830 1.81164 1.58403 1.85395 1.23716 0.99223 0.96428 1.00365 1.25532 1.02926 1.00877 0.96813 1.98444 1.73247 1.97063 1.25629 1.83329 1.47121 1.08378 1.11023 0.76943 0.85500 1.15094 1.15747 0.82556 0.76538 0.91039 0.91152 0.90739 0.90786 0.89990 0.88166 0.88168 0.89935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.26 12.85 -35.23 -0.45 0.81 16 2 C -0.02 0.06 2.95 36.01 0.11 0.17 16 3 Si 0.65 -1.78 30.91 -169.99 -5.25 -7.03 16 4 C -0.24 0.42 5.68 -36.19 -0.21 0.22 16 5 C -0.07 0.09 9.71 -39.00 -0.38 -0.28 16 6 C -0.16 -0.20 5.98 -104.59 -0.63 -0.83 16 7 C 0.57 1.56 7.79 -12.69 -0.10 1.47 16 8 O -0.52 -3.27 14.91 5.23 0.08 -3.20 16 9 N -0.73 0.35 5.53 -61.50 -0.34 0.01 16 10 C 0.12 -0.09 5.67 -4.04 -0.02 -0.11 16 11 C -0.12 0.36 5.15 -26.73 -0.14 0.23 16 12 C -0.11 0.21 3.62 -89.81 -0.32 -0.11 16 13 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 14 C -0.16 0.34 7.54 -25.92 -0.20 0.14 16 15 C 0.06 -0.05 5.70 -25.83 -0.15 -0.20 16 16 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 17 F -0.20 -0.53 17.38 2.25 0.04 -0.49 16 18 C -0.16 0.29 7.54 -25.83 -0.19 0.09 16 19 C -0.11 -0.19 6.87 30.01 0.21 0.01 16 20 Cl 0.03 0.09 27.20 -51.86 -1.41 -1.32 16 21 S 0.24 -0.26 20.17 -107.50 -2.17 -2.43 16 22 H 0.38 -2.27 8.70 45.56 0.40 -1.88 16 23 H 0.13 -0.35 7.96 -51.93 -0.41 -0.76 16 24 H -0.23 0.00 7.11 56.52 0.40 0.40 16 25 H -0.23 0.15 7.11 56.52 0.40 0.55 16 26 H 0.16 -0.54 7.10 -52.49 -0.37 -0.91 16 27 H 0.40 -1.27 7.02 -40.82 -0.29 -1.55 16 28 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 29 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 30 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 31 H 0.07 -0.28 7.87 -51.93 -0.41 -0.69 16 32 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 33 H 0.10 -0.36 8.10 -51.93 -0.42 -0.79 16 34 H 0.10 -0.32 7.92 -51.93 -0.41 -0.73 16 35 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 LS Contribution 329.00 15.07 4.96 4.96 Total: 0.00 -7.26 329.00 -10.64 -17.90 By element: Atomic # 1 Polarization: -5.94 SS G_CDS: -4.07 Total: -10.02 kcal Atomic # 6 Polarization: 2.82 SS G_CDS: -2.02 Total: 0.80 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -0.34 Total: 0.01 kcal Atomic # 8 Polarization: -2.01 SS G_CDS: -0.37 Total: -2.38 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.04 Total: -0.49 kcal Atomic # 14 Polarization: -1.78 SS G_CDS: -5.25 Total: -7.03 kcal Atomic # 16 Polarization: -0.26 SS G_CDS: -2.17 Total: -2.43 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.41 Total: -1.32 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -7.26 -10.64 -17.90 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13431040.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.140 kcal (2) G-P(sol) polarization free energy of solvation -7.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.402 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.642 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.904 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.044 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds