Wall clock time and date at job start Sun Mar 7 2021 02:34:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.34178 * 125.43858 * 65.00487 * 4 2 1 6 6 C 1.47013 * 105.95104 * 179.97438 * 5 4 2 7 7 C 1.47386 * 127.19097 * 180.02562 * 6 5 4 8 8 O 1.21614 * 119.99799 * 359.97438 * 7 6 5 9 9 N 1.34772 * 120.00004 * 179.97438 * 7 6 5 10 10 C 1.46505 * 120.00095 * 179.97438 * 9 7 6 11 11 C 1.52996 * 109.47426 * 179.97438 * 10 9 7 12 12 C 1.52994 * 109.47290 * 179.97438 * 11 10 9 13 13 H 1.09004 * 112.85048 * 45.33677 * 12 11 10 14 14 C 1.53779 * 113.61708 * 176.52964 * 12 11 10 15 15 C 1.53782 * 87.08038 * 139.98145 * 14 12 11 16 16 H 1.09007 * 113.61643 * 220.01855 * 15 14 12 17 17 F 1.39900 * 113.61318 * 89.20482 * 15 14 12 18 18 C 1.53782 * 113.61508 * 274.14091 * 12 11 10 19 19 C 1.36411 * 105.62104 * 359.97438 * 6 5 4 20 20 O 1.33655 * 108.39293 * 359.75870 * 19 6 5 21 21 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 22 22 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 23 23 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 24 24 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 25 25 H 1.08003 * 127.02202 * 359.96943 * 5 4 2 26 26 H 0.97001 * 120.00315 * 0.02562 * 9 7 6 27 27 H 1.09002 * 109.46902 * 300.00509 * 10 9 7 28 28 H 1.09006 * 109.46968 * 59.99766 * 10 9 7 29 29 H 1.08994 * 109.47284 * 300.00236 * 11 10 9 30 30 H 1.09007 * 109.46702 * 60.00247 * 11 10 9 31 31 H 1.08994 * 113.61946 * 254.53560 * 14 12 11 32 32 H 1.09000 * 113.61100 * 25.43726 * 14 12 11 33 33 H 1.08997 * 113.61416 * 334.56221 * 18 12 11 34 34 H 1.09008 * 113.61438 * 105.47250 * 18 12 11 35 35 H 1.08000 * 125.80819 * 180.02562 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.7549 -2.0122 1.5038 6 6 2.4127 -2.2461 2.7976 7 6 2.5012 -3.5194 3.5348 8 8 1.9937 -4.5245 3.0752 9 7 3.1444 -3.5697 4.7180 10 6 3.2319 -4.8351 5.4510 11 6 4.0081 -4.6187 6.7515 12 6 4.0989 -5.9401 7.5173 13 1 4.3689 -6.7815 6.8791 14 6 4.9356 -5.8500 8.8044 15 6 3.8786 -6.7534 9.4612 16 1 3.6360 -6.4687 10.4850 17 9 4.1475 -8.1198 9.3266 18 6 2.8829 -6.2151 8.4176 19 6 2.9250 -1.0389 3.1729 20 8 2.6320 -0.1434 2.2249 21 1 -0.3934 0.4418 0.7650 22 1 1.7924 -0.5139 -0.8899 23 1 3.5346 1.7702 0.0322 24 1 1.5616 2.4678 -1.2086 25 1 1.2358 -2.7395 0.8972 26 1 3.5488 -2.7679 5.0847 27 1 2.2279 -5.1916 5.6816 28 1 3.7482 -5.5746 4.8389 29 1 5.0120 -4.2625 6.5205 30 1 3.4920 -3.8791 7.3638 31 1 5.9173 -6.3162 8.7206 32 1 4.9771 -4.8469 9.2288 33 1 2.3623 -5.3121 8.7361 34 1 2.2098 -6.9759 8.0220 35 1 3.4776 -0.8412 4.0795 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_13456056.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:35 Heat of formation + Delta-G solvation = -80.428379 kcal Electronic energy + Delta-G solvation = -19773.116290 eV Core-core repulsion = 16268.601434 eV Total energy + Delta-G solvation = -3504.514856 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 270.110 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -48.66685 -43.72260 -40.64111 -39.32754 -38.00059 -36.17137 -34.06064 -32.35089 -31.19938 -27.03920 -26.76666 -26.17214 -24.30302 -22.81072 -22.31369 -21.03532 -20.35854 -19.35252 -17.84266 -17.54581 -17.49856 -17.09334 -16.94761 -16.71684 -16.48432 -16.05752 -15.93158 -15.67592 -15.35403 -14.75523 -14.52056 -14.24816 -14.04317 -13.83504 -13.59115 -13.47382 -13.09341 -12.82359 -12.53018 -12.21642 -11.96928 -11.81093 -11.37762 -11.17920 -10.98161 -10.94947 -10.62553 -10.23638 -9.79402 -4.97583 0.25921 0.80429 1.18277 1.51965 1.81395 1.94763 2.04764 2.22856 3.29134 3.30472 3.36163 3.49087 3.59192 3.62000 3.72691 3.88834 3.96485 4.10784 4.23784 4.29694 4.41737 4.44727 4.49587 4.60319 4.74486 4.76066 4.83625 4.89296 4.94407 5.03691 5.10358 5.13044 5.19788 5.33869 5.50616 5.82887 6.46022 6.63142 7.13016 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.039 4.039 3 Si 0.803 3.197 4 C -0.051 4.051 5 C -0.155 4.155 6 C -0.272 4.272 7 C 0.582 3.418 8 O -0.592 6.592 9 N -0.708 5.708 10 C 0.119 3.881 11 C -0.105 4.105 12 C -0.110 4.110 13 H 0.079 0.921 14 C -0.146 4.146 15 C 0.042 3.958 16 H 0.113 0.887 17 F -0.223 7.223 18 C -0.158 4.158 19 C 0.070 3.930 20 O -0.162 6.162 21 H 0.400 0.600 22 H 0.128 0.872 23 H -0.287 1.287 24 H -0.286 1.286 25 H 0.141 0.859 26 H 0.419 0.581 27 H 0.056 0.944 28 H 0.050 0.950 29 H 0.089 0.911 30 H 0.097 0.903 31 H 0.073 0.927 32 H 0.126 0.874 33 H 0.122 0.878 34 H 0.065 0.935 35 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.417 8.509 6.491 10.971 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.148 4.148 3 Si 0.706 3.294 4 C -0.100 4.100 5 C -0.175 4.175 6 C -0.276 4.276 7 C 0.371 3.629 8 O -0.474 6.474 9 N -0.360 5.360 10 C -0.004 4.004 11 C -0.143 4.143 12 C -0.129 4.129 13 H 0.097 0.903 14 C -0.184 4.184 15 C 0.006 3.994 16 H 0.131 0.869 17 F -0.204 7.204 18 C -0.195 4.195 19 C 0.000 4.000 20 O -0.057 6.057 21 H 0.251 0.749 22 H 0.146 0.854 23 H -0.214 1.214 24 H -0.213 1.213 25 H 0.158 0.842 26 H 0.257 0.743 27 H 0.075 0.925 28 H 0.068 0.932 29 H 0.107 0.893 30 H 0.115 0.885 31 H 0.092 0.908 32 H 0.144 0.856 33 H 0.140 0.860 34 H 0.084 0.916 35 H 0.283 0.717 Dipole moment (debyes) X Y Z Total from point charges 2.698 8.327 5.207 10.185 hybrid contribution 0.070 -1.429 -0.324 1.467 sum 2.768 6.898 4.883 8.893 Atomic orbital electron populations 1.86545 1.16279 1.82253 1.50361 1.24717 0.85321 1.12410 0.92308 0.93161 0.77728 0.73572 0.84923 1.22755 1.01227 0.92804 0.93201 1.22568 1.02478 0.96010 0.96470 1.21470 1.11621 0.95064 0.99471 1.17590 0.77427 0.86943 0.80913 1.90794 1.49323 1.37805 1.69432 1.45652 1.56435 1.13709 1.20241 1.21387 1.00733 0.85238 0.93073 1.21689 1.01476 0.97368 0.93764 1.22471 0.96647 0.98217 0.95611 0.90290 1.23607 0.97755 1.01573 0.95456 1.22797 0.99293 0.75580 1.01694 0.86907 1.92774 1.94957 1.35153 1.97511 1.23762 0.96757 1.02899 0.96099 1.25363 0.96600 0.84834 0.93231 1.83713 1.56595 1.39044 1.26383 0.74881 0.85444 1.21414 1.21265 0.84160 0.74350 0.92533 0.93172 0.89273 0.88464 0.90823 0.85592 0.85986 0.91635 0.71725 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.32 12.88 -148.98 -1.92 -1.60 16 2 C -0.04 0.05 2.97 71.24 0.21 0.26 16 3 Si 0.80 -3.17 32.09 68.60 2.20 -0.97 16 4 C -0.05 -0.03 6.18 24.76 0.15 0.13 16 5 C -0.16 -0.87 10.90 23.65 0.26 -0.61 16 6 C -0.27 -0.63 6.31 -18.99 -0.12 -0.75 16 7 C 0.58 3.67 7.81 86.65 0.68 4.35 16 8 O -0.59 -10.35 16.98 -4.08 -0.07 -10.42 16 9 N -0.71 2.16 5.55 -466.40 -2.59 -0.43 16 10 C 0.12 -0.22 5.67 86.38 0.49 0.27 16 11 C -0.11 0.93 5.15 30.59 0.16 1.09 16 12 C -0.11 0.54 3.62 -10.27 -0.04 0.51 16 13 H 0.08 -0.07 8.14 -2.38 -0.02 -0.09 16 14 C -0.15 0.91 7.54 31.12 0.23 1.15 16 15 C 0.04 -0.10 5.69 31.18 0.18 0.08 16 16 H 0.11 -0.69 8.14 -2.38 -0.02 -0.71 16 17 F -0.22 -1.38 17.38 44.97 0.78 -0.60 16 18 C -0.16 0.70 7.54 31.18 0.24 0.93 16 19 C 0.07 -0.47 11.61 67.39 0.78 0.31 16 20 O -0.16 0.56 8.90 4.49 0.04 0.60 16 21 H 0.40 -3.66 8.70 -74.06 -0.64 -4.30 16 22 H 0.13 -0.11 7.96 -2.39 -0.02 -0.13 16 23 H -0.29 -0.50 7.11 99.48 0.71 0.20 16 24 H -0.29 -0.68 7.11 99.48 0.71 0.03 16 25 H 0.14 1.26 8.06 -2.91 -0.02 1.23 16 26 H 0.42 -5.07 7.44 -92.71 -0.69 -5.76 16 27 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 28 H 0.05 0.13 8.14 -2.38 -0.02 0.11 16 29 H 0.09 -0.98 8.14 -2.39 -0.02 -1.00 16 30 H 0.10 -1.24 7.87 -2.38 -0.02 -1.26 16 31 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 32 H 0.13 -1.42 8.10 -2.39 -0.02 -1.44 16 33 H 0.12 -1.09 7.92 -2.39 -0.02 -1.11 16 34 H 0.06 -0.06 8.14 -2.38 -0.02 -0.08 16 35 H 0.27 -5.00 7.47 -2.91 -0.02 -5.03 16 Total: 0.00 -26.77 309.51 1.49 -25.28 By element: Atomic # 1 Polarization: -19.39 SS G_CDS: -0.18 Total: -19.57 kcal Atomic # 6 Polarization: 4.49 SS G_CDS: 3.22 Total: 7.71 kcal Atomic # 7 Polarization: 2.16 SS G_CDS: -2.59 Total: -0.43 kcal Atomic # 8 Polarization: -9.48 SS G_CDS: -1.95 Total: -11.43 kcal Atomic # 9 Polarization: -1.38 SS G_CDS: 0.78 Total: -0.60 kcal Atomic # 14 Polarization: -3.17 SS G_CDS: 2.20 Total: -0.97 kcal Total: -26.77 1.49 -25.28 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13456056.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.145 kcal (2) G-P(sol) polarization free energy of solvation -26.774 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.919 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.490 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.284 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.428 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds