Wall clock time and date at job start Sun Mar 7 2021 01:25:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.35448 * 125.56296 * 2 1 4 4 C 1.50698 * 126.06804 * 359.97438 * 3 2 1 5 5 O 1.42897 * 109.47295 * 155.75304 * 4 3 2 6 6 Si 1.86305 * 109.47054 * 35.75822 * 4 3 2 7 7 C 1.39832 * 107.86353 * 179.97438 * 3 2 1 8 8 C 1.50701 * 126.45617 * 180.02562 * 7 3 2 9 9 C 1.37867 * 107.08638 * 359.97438 * 7 3 2 10 10 C 1.46684 * 126.23177 * 180.02562 * 9 7 3 11 11 O 1.21692 * 120.00214 * 359.97438 * 10 9 7 12 12 N 1.34776 * 119.99804 * 180.02562 * 10 9 7 13 13 C 1.46494 * 120.00021 * 179.97438 * 12 10 9 14 14 H 1.08995 * 112.91136 * 336.25386 * 13 12 10 15 15 C 1.53786 * 113.61123 * 107.50566 * 13 12 10 16 16 C 1.53787 * 87.08045 * 139.98235 * 15 13 12 17 17 H 1.09007 * 113.61373 * 89.11400 * 16 15 13 18 18 C 1.53002 * 113.61251 * 220.01692 * 16 15 13 19 19 N 1.46505 * 109.46749 * 272.49715 * 18 16 15 20 20 C 1.36878 * 126.39505 * 90.00740 * 19 18 16 21 21 C 1.34672 * 106.81604 * 179.97438 * 20 19 18 22 22 N 1.34129 * 108.02113 * 359.97438 * 21 20 19 23 23 C 1.30501 * 109.25364 * 359.72717 * 22 21 20 24 24 C 1.53780 * 87.08071 * 334.56592 * 16 15 13 25 25 N 1.35531 * 125.56113 * 180.27295 * 2 1 3 26 26 H 1.08992 * 109.47219 * 83.98661 * 1 2 3 27 27 H 1.08999 * 109.46916 * 203.98725 * 1 2 3 28 28 H 1.08996 * 109.46828 * 323.98087 * 1 2 3 29 29 H 1.09000 * 109.47541 * 275.75992 * 4 3 2 30 30 H 0.96704 * 114.00311 * 300.00435 * 5 4 3 31 31 H 1.48491 * 110.00033 * 58.67699 * 6 4 3 32 32 H 1.48495 * 110.00048 * 179.97438 * 6 4 3 33 33 H 1.09008 * 109.46918 * 269.97907 * 8 7 3 34 34 H 1.08995 * 109.47063 * 29.97720 * 8 7 3 35 35 H 1.09001 * 109.47462 * 149.98588 * 8 7 3 36 36 H 0.97001 * 119.99872 * 0.02562 * 12 10 9 37 37 H 1.08995 * 113.61544 * 25.43603 * 15 13 12 38 38 H 1.09008 * 113.60997 * 254.52837 * 15 13 12 39 39 H 1.08994 * 109.46900 * 32.49836 * 18 16 15 40 40 H 1.09001 * 109.46693 * 152.50087 * 18 16 15 41 41 H 1.08001 * 126.59368 * 359.95363 * 20 19 18 42 42 H 1.08004 * 125.98807 * 179.97438 * 21 20 19 43 43 H 1.07997 * 125.64835 * 180.29290 * 23 22 21 44 44 H 1.08998 * 113.61483 * 139.97934 * 24 16 15 45 45 H 1.08994 * 113.61443 * 270.88496 * 24 16 15 46 46 H 0.96995 * 125.68488 * 0.06274 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8199 2.5320 -0.0005 5 8 2.8354 3.3714 0.5529 6 14 0.2711 2.6725 1.0253 7 6 3.6269 0.6767 0.0006 8 6 4.8485 1.5592 0.0014 9 6 3.6122 -0.7019 0.0015 10 6 4.7860 -1.5815 0.0029 11 8 5.9050 -1.1030 0.0029 12 7 4.6254 -2.9196 0.0032 13 6 5.7977 -3.7981 0.0041 14 1 6.6885 -3.3173 -0.3999 15 6 6.0357 -4.5063 1.3482 16 6 6.4066 -5.7571 0.5339 17 1 7.4640 -5.8117 0.2748 18 6 5.8723 -7.0594 1.1335 19 7 6.8355 -7.5801 2.1069 20 6 6.8714 -7.2966 3.4455 21 6 7.9093 -7.9824 3.9613 22 7 8.4910 -8.6664 2.9649 23 6 7.8494 -8.4350 1.8523 24 6 5.5252 -5.1897 -0.5912 25 7 2.2953 -1.1025 -0.0053 26 1 -0.3633 0.1077 -1.0219 27 1 -0.3633 -0.9389 0.4178 28 1 -0.3633 0.8312 0.6043 29 1 1.6079 2.8442 -1.0231 30 1 3.0752 3.1507 1.4633 31 1 0.5388 2.2197 2.4139 32 1 -0.2071 4.0783 1.0333 33 1 5.1438 1.7718 -1.0262 34 1 4.6215 2.4934 0.5148 35 1 5.6639 1.0506 0.5157 36 1 3.7335 -3.3010 0.0021 37 1 5.1315 -4.6261 1.9448 38 1 6.8684 -4.0933 1.9178 39 1 4.9214 -6.8673 1.6303 40 1 5.7261 -7.7917 0.3395 41 1 6.1971 -6.6475 3.9844 42 1 8.2190 -7.9817 4.9960 43 1 8.0911 -8.8553 0.8872 44 1 5.9455 -5.3284 -1.5872 45 1 4.4813 -5.4962 -0.5247 46 1 1.9834 -2.0210 -0.0105 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:25:49 Heat of formation + Delta-G solvation = 70.531363 kcal Electronic energy + Delta-G solvation = -27877.745433 eV Core-core repulsion = 23964.806220 eV Total energy + Delta-G solvation = -3912.939213 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.168 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.97838 -42.74252 -41.08352 -39.37315 -37.91322 -35.57618 -34.22509 -33.71010 -32.97775 -30.41984 -29.44923 -29.11894 -27.42884 -27.05157 -26.36924 -24.27241 -22.44621 -22.25519 -21.76199 -21.28328 -20.78978 -20.31193 -19.32333 -18.57314 -17.68844 -17.32519 -16.92028 -16.65623 -16.47762 -16.12302 -15.94059 -15.65557 -15.40119 -15.14527 -14.88331 -14.76694 -14.48656 -14.33238 -14.27549 -14.17174 -13.97626 -13.87941 -13.74751 -13.64427 -13.29525 -13.22573 -13.10186 -12.59895 -12.45463 -12.29191 -12.21353 -11.80752 -11.72228 -11.07831 -10.84912 -10.53933 -10.46999 -10.26759 -9.53081 -9.42149 -9.06406 -4.80173 0.33728 1.13003 1.16749 1.60854 1.65445 1.75197 1.85881 1.97025 2.07526 2.30378 2.32182 3.06403 3.16139 3.37124 3.39694 3.47131 3.56236 3.69620 3.76302 3.83359 3.85262 3.90854 3.94557 3.97714 4.09811 4.22795 4.30476 4.34782 4.43919 4.47917 4.55346 4.58927 4.64201 4.65577 4.69043 4.75797 4.80763 4.89527 4.94796 5.10866 5.26338 5.31558 5.35481 5.43697 5.66027 5.83951 5.88923 6.19657 6.24362 6.35606 6.51741 7.08250 7.19554 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.063 3.937 3 C -0.207 4.207 4 C -0.031 4.031 5 O -0.528 6.528 6 Si 0.639 3.361 7 C -0.042 4.042 8 C -0.101 4.101 9 C -0.067 4.067 10 C 0.592 3.408 11 O -0.520 6.520 12 N -0.724 5.724 13 C 0.128 3.872 14 H 0.121 0.879 15 C -0.146 4.146 16 C -0.125 4.125 17 H 0.104 0.896 18 C 0.117 3.883 19 N -0.458 5.458 20 C -0.055 4.055 21 C -0.030 4.030 22 N -0.495 5.495 23 C 0.180 3.820 24 C -0.137 4.137 25 N -0.535 5.535 26 H 0.097 0.903 27 H 0.082 0.918 28 H 0.088 0.912 29 H 0.114 0.886 30 H 0.375 0.625 31 H -0.261 1.261 32 H -0.252 1.252 33 H 0.067 0.933 34 H 0.081 0.919 35 H 0.075 0.925 36 H 0.393 0.607 37 H 0.086 0.914 38 H 0.077 0.923 39 H 0.092 0.908 40 H 0.097 0.903 41 H 0.171 0.829 42 H 0.169 0.831 43 H 0.203 0.797 44 H 0.084 0.916 45 H 0.090 0.910 46 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.944 -3.263 -2.642 9.881 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.055 4.055 3 C -0.214 4.214 4 C -0.141 4.141 5 O -0.334 6.334 6 Si 0.540 3.460 7 C -0.050 4.050 8 C -0.158 4.158 9 C -0.178 4.178 10 C 0.381 3.619 11 O -0.395 6.395 12 N -0.375 5.375 13 C 0.023 3.977 14 H 0.138 0.862 15 C -0.185 4.185 16 C -0.145 4.145 17 H 0.122 0.878 18 C -0.006 4.006 19 N -0.141 5.141 20 C -0.187 4.187 21 C -0.178 4.178 22 N -0.213 5.213 23 C -0.102 4.102 24 C -0.175 4.175 25 N -0.133 5.133 26 H 0.115 0.885 27 H 0.100 0.900 28 H 0.105 0.895 29 H 0.131 0.869 30 H 0.223 0.777 31 H -0.185 1.185 32 H -0.177 1.177 33 H 0.086 0.914 34 H 0.100 0.900 35 H 0.094 0.906 36 H 0.227 0.773 37 H 0.104 0.896 38 H 0.096 0.904 39 H 0.111 0.889 40 H 0.116 0.884 41 H 0.188 0.812 42 H 0.186 0.814 43 H 0.220 0.780 44 H 0.102 0.898 45 H 0.108 0.892 46 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -7.935 -2.907 -2.547 8.827 hybrid contribution -0.293 -0.069 0.553 0.630 sum -8.228 -2.976 -1.994 8.974 Atomic orbital electron populations 1.20540 0.87451 1.02068 1.03983 1.20137 0.93450 0.85784 1.06103 1.19577 0.92965 0.94932 1.13963 1.24203 0.99036 0.86364 1.04529 1.86565 1.56651 1.57492 1.32688 0.95396 0.84524 0.84188 0.81921 1.19814 0.94866 0.90725 0.99594 1.20602 0.93805 0.98521 1.02853 1.20101 0.82726 0.94127 1.20866 1.17053 0.87583 0.81300 0.75980 1.90851 1.24188 1.74876 1.49607 1.45841 1.09293 1.05780 1.76598 1.22468 0.90024 0.88500 0.96725 0.86159 1.23569 1.02450 0.95279 0.97202 1.22796 1.01186 0.93262 0.97265 0.87765 1.21898 0.91279 0.95861 0.91539 1.45564 1.25059 1.35416 1.08084 1.22714 1.04724 1.07398 0.83883 1.22359 0.96217 0.99855 0.99335 1.70322 1.28139 1.24085 0.98716 1.25045 0.88825 0.96291 1.00077 1.23368 1.00599 0.94594 0.98981 1.41722 1.05287 1.08148 1.58105 0.88489 0.89959 0.89479 0.86854 0.77722 1.18522 1.17746 0.91430 0.90024 0.90626 0.77287 0.89586 0.90442 0.88943 0.88436 0.81160 0.81399 0.78013 0.89766 0.89182 0.74733 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.48 9.40 36.01 0.34 0.81 16 2 C 0.06 -0.12 6.81 -81.95 -0.56 -0.68 16 3 C -0.21 -0.11 5.32 -105.02 -0.56 -0.67 16 4 C -0.03 -0.01 3.06 36.00 0.11 0.10 16 5 O -0.53 -0.92 10.24 -35.23 -0.36 -1.29 16 6 Si 0.64 -0.58 27.72 -169.99 -4.71 -5.30 16 7 C -0.04 -0.10 6.15 -104.16 -0.64 -0.74 16 8 C -0.10 -0.31 9.43 36.01 0.34 0.03 16 9 C -0.07 -0.07 7.06 -81.98 -0.58 -0.65 16 10 C 0.59 1.03 7.79 -12.85 -0.10 0.93 16 11 O -0.52 -2.88 14.40 5.20 0.07 -2.81 16 12 N -0.72 1.56 5.35 -54.32 -0.29 1.27 16 13 C 0.13 -0.29 4.24 -67.12 -0.28 -0.57 16 14 H 0.12 0.00 7.46 -51.93 -0.39 -0.38 16 15 C -0.15 0.40 7.43 -25.91 -0.19 0.21 16 16 C -0.13 0.50 3.96 -89.80 -0.36 0.14 16 17 H 0.10 -0.28 8.14 -51.92 -0.42 -0.70 16 18 C 0.12 -0.49 5.99 -4.04 -0.02 -0.52 16 19 N -0.46 0.35 2.75 -118.57 -0.33 0.03 16 20 C -0.05 -0.02 11.58 -16.56 -0.19 -0.21 16 21 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 22 N -0.49 -2.16 11.25 -14.66 -0.16 -2.33 16 23 C 0.18 0.19 12.56 -90.37 -1.14 -0.94 16 24 C -0.14 0.67 7.39 -25.92 -0.19 0.47 16 25 N -0.54 1.34 5.99 -5.69 -0.03 1.31 16 26 H 0.10 -0.68 8.14 -51.93 -0.42 -1.10 16 27 H 0.08 -0.60 8.14 -51.93 -0.42 -1.02 16 28 H 0.09 -0.48 2.71 -51.93 -0.14 -0.62 16 29 H 0.11 -0.04 7.96 -51.93 -0.41 -0.46 16 30 H 0.37 -0.18 8.08 45.56 0.37 0.19 16 31 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 32 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 33 H 0.07 0.24 8.14 -51.92 -0.42 -0.18 16 34 H 0.08 0.17 5.12 -51.93 -0.27 -0.09 16 35 H 0.07 0.33 6.48 -51.93 -0.34 -0.01 16 36 H 0.39 -2.05 7.86 -40.82 -0.32 -2.38 16 37 H 0.09 -0.31 7.90 -51.93 -0.41 -0.72 16 38 H 0.08 -0.05 8.14 -51.92 -0.42 -0.48 16 39 H 0.09 -0.49 7.84 -51.93 -0.41 -0.89 16 40 H 0.10 -0.54 8.14 -51.93 -0.42 -0.97 16 41 H 0.17 -0.38 8.06 -52.49 -0.42 -0.80 16 42 H 0.17 0.15 8.06 -52.48 -0.42 -0.27 16 43 H 0.20 -0.44 8.06 -52.49 -0.42 -0.86 16 44 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 45 H 0.09 -0.58 8.08 -51.93 -0.42 -1.00 16 46 H 0.42 -2.52 8.19 -40.82 -0.33 -2.85 16 LS Contribution 370.81 15.07 5.59 5.59 Total: 0.00 -11.86 370.81 -10.95 -22.81 By element: Atomic # 1 Polarization: -10.23 SS G_CDS: -6.49 Total: -16.72 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -4.24 Total: -2.57 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: -0.82 Total: 0.27 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -0.29 Total: -4.09 kcal Atomic # 14 Polarization: -0.58 SS G_CDS: -4.71 Total: -5.30 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -11.86 -10.95 -22.81 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 93.346 kcal (2) G-P(sol) polarization free energy of solvation -11.860 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.486 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.954 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.815 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.531 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds