Wall clock time and date at job start Sun Mar 7 2021 01:26:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86302 * 109.46929 * 2 1 4 4 C 1.50701 * 109.46996 * 119.99602 * 2 1 3 5 5 C 1.38186 * 119.84454 * 255.02315 * 4 2 1 6 6 C 1.38313 * 120.14535 * 179.72641 * 5 4 2 7 7 F 1.35099 * 120.08937 * 180.28100 * 6 5 4 8 8 C 1.39808 * 119.82985 * 0.52558 * 6 5 4 9 9 C 1.47699 * 120.15693 * 179.74864 * 8 6 5 10 10 O 1.21566 * 119.99852 * 359.72820 * 9 8 6 11 11 N 1.34769 * 120.00242 * 179.72673 * 9 8 6 12 12 C 1.46497 * 120.00274 * 180.02562 * 11 9 8 13 13 H 1.09002 * 112.90477 * 336.24972 * 12 11 9 14 14 C 1.53779 * 113.61581 * 107.50145 * 12 11 9 15 15 C 1.53779 * 87.08402 * 139.98450 * 14 12 11 16 16 H 1.09000 * 113.61527 * 89.11480 * 15 14 12 17 17 C 1.53005 * 113.69064 * 220.00975 * 15 14 12 18 18 N 1.46499 * 109.46872 * 272.52979 * 17 15 14 19 19 C 1.36870 * 126.39918 * 269.71291 * 18 17 15 20 20 C 1.34672 * 106.81802 * 179.84735 * 19 18 17 21 21 N 1.34126 * 108.01702 * 0.41858 * 20 19 18 22 22 C 1.30494 * 109.25617 * 359.73817 * 21 20 19 23 23 C 1.53784 * 113.61569 * 204.99925 * 12 11 9 24 24 C 1.39661 * 119.69012 * 359.47648 * 8 6 5 25 25 C 1.38070 * 119.85090 * 0.25479 * 24 8 6 26 26 F 1.35104 * 119.91635 * 179.97438 * 25 24 8 27 27 H 0.96705 * 114.00329 * 60.00320 * 1 2 3 28 28 H 1.08993 * 109.47324 * 240.00102 * 2 1 3 29 29 H 1.48496 * 110.00177 * 298.68048 * 3 2 1 30 30 H 1.48500 * 109.99949 * 60.00103 * 3 2 1 31 31 H 1.08003 * 119.92957 * 359.97438 * 5 4 2 32 32 H 0.97009 * 120.00192 * 0.02562 * 11 9 8 33 33 H 1.09006 * 113.61307 * 25.43652 * 14 12 11 34 34 H 1.08999 * 113.69146 * 254.54138 * 14 12 11 35 35 H 1.08995 * 109.46809 * 32.53527 * 17 15 14 36 36 H 1.09006 * 109.46737 * 152.53023 * 17 15 14 37 37 H 1.08007 * 126.59396 * 359.97438 * 19 18 17 38 38 H 1.08006 * 125.98956 * 180.12315 * 20 19 18 39 39 H 1.08007 * 125.64769 * 179.97438 * 22 21 20 40 40 H 1.09004 * 113.61451 * 105.47149 * 23 12 11 41 41 H 1.08994 * 113.61477 * 334.56451 * 23 12 11 42 42 H 1.07997 * 120.07264 * 180.22211 * 24 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9312 -0.7103 1.2305 5 6 2.4525 0.0199 2.2815 6 6 2.9101 -0.6252 3.4161 7 9 3.4142 0.0902 4.4453 8 6 2.8542 -2.0201 3.4933 9 6 3.3460 -2.7168 4.6992 10 8 3.8052 -2.0776 5.6257 11 7 3.2856 -4.0611 4.7725 12 6 3.7729 -4.7521 5.9689 13 1 4.5064 -4.1695 6.5262 14 6 2.6502 -5.3306 6.8463 15 6 3.5507 -6.5603 7.0506 16 1 4.2235 -6.4720 7.9037 17 6 2.7918 -7.8887 7.0275 18 7 2.3053 -8.1966 8.3746 19 6 2.9699 -8.9108 9.3346 20 6 2.1672 -8.9519 10.4152 21 7 1.0393 -8.2890 10.1197 22 6 1.1149 -7.8338 8.8990 23 6 4.2090 -6.2035 5.7073 24 6 2.3261 -2.7513 2.4270 25 6 1.8678 -2.0936 1.3028 26 9 1.3571 -2.7996 0.2704 27 1 -0.3934 0.4417 -0.7651 28 1 1.7923 -0.5138 -0.8899 29 1 1.5878 2.4586 -1.2242 30 1 1.5613 2.4679 1.2085 31 1 2.4990 1.0971 2.2185 32 1 2.9196 -4.5713 4.0331 33 1 1.7340 -5.5468 6.2968 34 1 2.4721 -4.7633 7.7599 35 1 1.9460 -7.8119 6.3443 36 1 3.4591 -8.6825 6.6918 37 1 3.9505 -9.3542 9.2438 38 1 2.3904 -9.4381 11.3535 39 1 0.3517 -7.2620 8.3920 40 1 5.2904 -6.3401 5.7011 41 1 3.7189 -6.6583 4.8465 42 1 2.2767 -3.8287 2.4815 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:26:36 Heat of formation + Delta-G solvation = -23.995241 kcal Electronic energy + Delta-G solvation = -29725.173566 eV Core-core repulsion = 25117.502429 eV Total energy + Delta-G solvation = -4607.671137 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.123 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -50.13579 -49.99500 -42.95018 -41.59180 -40.43901 -39.38457 -37.85081 -35.59034 -34.37600 -33.18464 -31.44257 -30.36390 -29.11395 -27.85017 -27.02504 -24.82706 -24.47708 -23.23899 -22.23421 -21.98117 -21.68818 -21.07645 -19.54022 -18.88834 -18.79620 -18.44703 -18.39072 -17.51820 -17.25291 -17.11628 -16.54582 -16.47934 -16.30273 -16.07371 -15.86399 -15.65223 -15.59933 -15.42873 -15.24782 -14.80234 -14.56189 -14.41581 -14.08936 -14.04697 -13.84153 -13.78589 -13.64407 -13.62341 -13.28039 -13.03100 -12.49005 -12.46747 -12.18162 -12.03616 -11.72319 -11.13091 -10.81834 -10.78061 -10.65240 -10.50508 -10.25796 -9.84148 -9.39770 -5.17021 -0.85686 -0.36496 0.97644 1.15404 1.34348 1.40364 1.73169 1.74468 1.84662 2.19879 2.34807 2.67822 2.77346 2.95904 3.07927 3.17523 3.23046 3.29466 3.41998 3.46905 3.54265 3.64397 3.78905 3.85977 3.91695 3.95576 3.98690 4.11378 4.17790 4.27196 4.34188 4.42555 4.47570 4.54672 4.58666 4.61648 4.66283 4.67821 4.78241 4.83447 4.95352 5.26850 5.33272 5.34039 5.86474 6.17949 6.18704 6.26998 6.94437 7.22287 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.082 4.082 3 Si 0.692 3.308 4 C -0.051 4.051 5 C -0.133 4.133 6 C 0.161 3.839 7 F -0.104 7.104 8 C -0.143 4.143 9 C 0.562 3.438 10 O -0.511 6.511 11 N -0.714 5.714 12 C 0.126 3.874 13 H 0.121 0.879 14 C -0.148 4.148 15 C -0.126 4.126 16 H 0.104 0.896 17 C 0.116 3.884 18 N -0.458 5.458 19 C -0.058 4.058 20 C -0.029 4.029 21 N -0.496 5.496 22 C 0.183 3.817 23 C -0.136 4.136 24 C -0.094 4.094 25 C 0.110 3.890 26 F -0.122 7.122 27 H 0.386 0.614 28 H 0.087 0.913 29 H -0.252 1.252 30 H -0.249 1.249 31 H 0.159 0.841 32 H 0.401 0.599 33 H 0.089 0.911 34 H 0.078 0.922 35 H 0.095 0.905 36 H 0.095 0.905 37 H 0.173 0.827 38 H 0.169 0.831 39 H 0.201 0.799 40 H 0.084 0.916 41 H 0.092 0.908 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.348 -1.916 -7.607 8.529 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.191 4.191 3 Si 0.592 3.408 4 C -0.052 4.052 5 C -0.152 4.152 6 C 0.140 3.860 7 F -0.082 7.082 8 C -0.147 4.147 9 C 0.348 3.652 10 O -0.387 6.387 11 N -0.366 5.366 12 C 0.021 3.979 13 H 0.139 0.861 14 C -0.187 4.187 15 C -0.145 4.145 16 H 0.122 0.878 17 C -0.006 4.006 18 N -0.141 5.141 19 C -0.191 4.191 20 C -0.177 4.177 21 N -0.214 5.214 22 C -0.099 4.099 23 C -0.175 4.175 24 C -0.113 4.113 25 C 0.090 3.910 26 F -0.100 7.100 27 H 0.235 0.765 28 H 0.105 0.895 29 H -0.177 1.177 30 H -0.173 1.173 31 H 0.176 0.824 32 H 0.237 0.763 33 H 0.107 0.893 34 H 0.097 0.903 35 H 0.114 0.886 36 H 0.114 0.886 37 H 0.191 0.809 38 H 0.186 0.814 39 H 0.218 0.782 40 H 0.103 0.897 41 H 0.111 0.889 42 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 2.950 -0.788 -5.976 6.711 hybrid contribution -0.645 -0.632 -1.523 1.771 sum 2.305 -1.421 -7.499 7.973 Atomic orbital electron populations 1.86584 1.16740 1.80427 1.50112 1.24780 0.85447 1.11755 0.97122 0.94846 0.91311 0.73642 0.81043 1.19310 0.98297 0.91829 0.95752 1.21014 1.00795 1.01779 0.91586 1.17452 0.95282 0.87945 0.85309 1.91657 1.83535 1.77116 1.55851 1.19859 1.05838 0.92528 0.96473 1.17861 0.78767 0.82466 0.86087 1.90897 1.44061 1.65722 1.37992 1.45833 1.64252 1.06136 1.20396 1.22518 0.97233 0.91839 0.86275 0.86092 1.23597 0.97854 0.96287 1.00952 1.22789 0.98794 0.93688 0.99246 0.87816 1.21907 0.99887 0.97591 0.81242 1.45563 1.15284 1.40522 1.12747 1.22759 1.01125 1.04555 0.90621 1.22362 0.91549 1.04296 0.99505 1.70319 1.24176 1.14075 1.12795 1.24991 0.89235 1.03849 0.91864 1.23375 1.02153 0.94869 0.97094 1.21120 0.97889 1.00985 0.91309 1.17199 0.98973 0.88813 0.85970 1.91569 1.84385 1.78028 1.56063 0.76474 0.89546 1.17691 1.17316 0.82421 0.76307 0.89263 0.90309 0.88627 0.88630 0.80947 0.81376 0.78218 0.89738 0.88948 0.83109 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.11 12.86 -35.23 -0.45 -0.35 16 2 C -0.08 0.13 2.43 36.01 0.09 0.22 16 3 Si 0.69 -1.77 30.19 -169.99 -5.13 -6.90 16 4 C -0.05 0.02 5.30 -104.49 -0.55 -0.53 16 5 C -0.13 0.05 8.62 -39.57 -0.34 -0.30 16 6 C 0.16 0.21 7.28 -38.97 -0.28 -0.07 16 7 F -0.10 -0.39 15.55 2.25 0.04 -0.35 16 8 C -0.14 -0.03 5.88 -104.91 -0.62 -0.64 16 9 C 0.56 0.72 7.77 -12.40 -0.10 0.62 16 10 O -0.51 -2.79 14.94 5.31 0.08 -2.71 16 11 N -0.71 1.67 5.30 -54.01 -0.29 1.38 16 12 C 0.13 -0.31 4.24 -67.12 -0.28 -0.59 16 13 H 0.12 -0.04 7.47 -51.93 -0.39 -0.43 16 14 C -0.15 0.43 7.43 -25.92 -0.19 0.24 16 15 C -0.13 0.50 3.96 -89.80 -0.36 0.15 16 16 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 17 C 0.12 -0.48 5.99 -4.04 -0.02 -0.50 16 18 N -0.46 0.29 2.75 -118.57 -0.33 -0.03 16 19 C -0.06 -0.02 11.58 -16.57 -0.19 -0.21 16 20 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 21 N -0.50 -2.26 11.25 -14.66 -0.16 -2.43 16 22 C 0.18 0.24 12.56 -90.38 -1.14 -0.89 16 23 C -0.14 0.68 7.39 -25.91 -0.19 0.49 16 24 C -0.09 0.18 9.52 -39.11 -0.37 -0.19 16 25 C 0.11 -0.05 7.23 -39.49 -0.29 -0.34 16 26 F -0.12 -0.05 16.73 2.25 0.04 -0.01 16 27 H 0.39 -1.63 8.74 45.56 0.40 -1.23 16 28 H 0.09 -0.27 7.89 -51.93 -0.41 -0.67 16 29 H -0.25 0.16 7.11 56.52 0.40 0.56 16 30 H -0.25 -0.05 6.74 56.52 0.38 0.33 16 31 H 0.16 -0.26 4.87 -52.48 -0.26 -0.51 16 32 H 0.40 -2.11 6.76 -40.82 -0.28 -2.39 16 33 H 0.09 -0.35 7.90 -51.93 -0.41 -0.76 16 34 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 35 H 0.10 -0.52 7.85 -51.93 -0.41 -0.93 16 36 H 0.10 -0.49 8.14 -51.93 -0.42 -0.91 16 37 H 0.17 -0.43 8.06 -52.48 -0.42 -0.85 16 38 H 0.17 0.15 8.06 -52.48 -0.42 -0.27 16 39 H 0.20 -0.32 8.06 -52.48 -0.42 -0.75 16 40 H 0.08 -0.41 8.14 -51.93 -0.42 -0.83 16 41 H 0.09 -0.60 8.08 -51.93 -0.42 -1.02 16 42 H 0.15 -0.78 6.40 -52.49 -0.34 -1.12 16 LS Contribution 365.17 15.07 5.50 5.50 Total: 0.00 -11.30 365.17 -10.44 -21.74 By element: Atomic # 1 Polarization: -8.31 SS G_CDS: -4.68 Total: -12.99 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: -5.05 Total: -2.85 kcal Atomic # 7 Polarization: -0.31 SS G_CDS: -0.78 Total: -1.08 kcal Atomic # 8 Polarization: -2.68 SS G_CDS: -0.37 Total: -3.06 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.07 Total: -0.37 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: -5.13 Total: -6.90 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -11.30 -10.44 -21.74 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.254 kcal (2) G-P(sol) polarization free energy of solvation -11.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.557 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.438 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.741 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.995 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds