Wall clock time and date at job start Sun Mar 7 2021 01:26:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.39284 * 121.03471 * 2 1 4 4 C 1.46497 * 134.19304 * 359.97438 * 3 2 1 5 5 C 1.50703 * 126.60244 * 359.97438 * 4 3 2 6 6 O 1.42903 * 109.46676 * 284.71604 * 5 4 3 7 7 Si 1.86288 * 109.47280 * 164.71189 * 5 4 3 8 8 C 1.34175 * 106.80162 * 179.71928 * 4 3 2 9 9 N 1.36956 * 109.95110 * 0.26111 * 8 4 3 10 10 C 1.37148 * 110.11119 * 0.02562 * 9 8 4 11 11 N 1.32828 * 132.96570 * 180.02562 * 10 9 8 12 12 C 1.31313 * 121.88488 * 179.19429 * 11 10 9 13 13 C 1.39752 * 121.02954 * 179.97438 * 2 1 3 14 14 C 1.47667 * 120.45858 * 0.04428 * 13 2 1 15 15 O 1.21578 * 119.99258 * 5.94072 * 14 13 2 16 16 N 1.34774 * 120.00186 * 185.94418 * 14 13 2 17 17 C 1.46499 * 119.99974 * 180.02562 * 16 14 13 18 18 H 1.08999 * 112.84568 * 25.33075 * 17 16 14 19 19 C 1.53778 * 113.61647 * 156.52704 * 17 16 14 20 20 C 1.53775 * 87.08160 * 139.98117 * 19 17 16 21 21 H 1.09001 * 113.61729 * 89.11707 * 20 19 17 22 22 C 1.53001 * 113.61469 * 220.02021 * 20 19 17 23 23 N 1.46503 * 109.47258 * 185.00219 * 22 20 19 24 24 C 1.36882 * 126.39521 * 269.71277 * 23 22 20 25 25 C 1.34670 * 106.81531 * 179.84182 * 24 23 22 26 26 N 1.34118 * 108.02112 * 0.41981 * 25 24 23 27 27 C 1.30501 * 109.25726 * 359.73664 * 26 25 24 28 28 C 1.53773 * 113.61443 * 254.13391 * 17 16 14 29 29 H 1.09002 * 109.47432 * 96.28537 * 1 2 3 30 30 H 1.09001 * 109.47288 * 216.28474 * 1 2 3 31 31 H 1.09000 * 109.47212 * 336.28596 * 1 2 3 32 32 H 1.09001 * 109.46950 * 44.70747 * 5 4 3 33 33 H 0.96696 * 113.99726 * 299.99308 * 6 5 4 34 34 H 1.48508 * 110.00037 * 180.02562 * 7 5 4 35 35 H 1.48501 * 110.00039 * 301.31835 * 7 5 4 36 36 H 1.08000 * 125.03088 * 180.28384 * 8 4 3 37 37 H 0.96999 * 124.94293 * 179.97438 * 9 8 4 38 38 H 1.08001 * 119.30805 * 180.25766 * 12 11 10 39 39 H 0.96996 * 119.99851 * 359.97438 * 16 14 13 40 40 H 1.09005 * 113.61401 * 254.53116 * 19 17 16 41 41 H 1.09001 * 113.61190 * 25.43014 * 19 17 16 42 42 H 1.09007 * 109.47036 * 305.00017 * 22 20 19 43 43 H 1.08999 * 109.46912 * 65.00041 * 22 20 19 44 44 H 1.08004 * 126.58692 * 359.97438 * 24 23 22 45 45 H 1.08003 * 125.98392 * 180.12103 * 25 24 23 46 46 H 1.08001 * 125.64820 * 179.97438 * 27 26 25 47 47 H 1.08998 * 113.61682 * 334.57106 * 28 17 16 48 48 H 1.09008 * 113.61583 * 105.46932 * 28 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8515 2.6100 -0.0005 5 6 0.4525 3.1704 -0.0017 6 8 -0.1158 3.0296 -1.3053 7 14 0.5057 4.9741 0.4613 8 6 2.9946 3.3125 0.0061 9 7 4.0668 2.4605 0.0049 10 6 3.6348 1.1588 -0.0033 11 7 4.2720 -0.0066 -0.0070 12 6 3.6266 -1.1501 0.0006 13 6 2.2273 -1.1975 0.0005 14 6 1.5224 -2.4951 0.0001 15 8 0.3121 -2.5292 -0.1097 16 7 2.2208 -3.6414 0.1215 17 6 1.5215 -4.9287 0.1206 18 1 0.5656 -4.8907 -0.4019 19 6 2.4085 -6.1113 -0.3031 20 6 1.7143 -6.9258 0.8012 21 1 0.8106 -7.4346 0.4660 22 6 2.6633 -7.8444 1.5736 23 7 1.8937 -8.6603 2.5161 24 6 1.5945 -8.3388 3.8126 25 6 0.8728 -9.3608 4.3108 26 7 0.7429 -10.2852 3.3478 27 6 1.3519 -9.8725 2.2700 28 6 1.4393 -5.5862 1.5082 29 1 -0.3634 -0.1125 -1.0215 30 1 -0.3634 -0.8284 0.6082 31 1 -0.3634 0.9409 0.4133 32 1 -0.1569 2.6276 0.7209 33 1 0.3759 3.4882 -2.0002 34 1 -0.8680 5.5384 0.4643 35 1 1.1238 5.1364 1.8017 36 1 3.0597 4.3906 0.0119 37 1 4.9965 2.7373 0.0084 38 1 4.1869 -2.0734 0.0013 39 1 3.1864 -3.6141 0.2088 40 1 2.2006 -6.4745 -1.3096 41 1 3.4708 -5.9471 -0.1223 42 1 3.1884 -8.4952 0.8743 43 1 3.3868 -7.2411 2.1219 44 1 1.8804 -7.4377 4.3348 45 1 0.4732 -9.4267 5.3120 46 1 1.4129 -10.4113 1.3360 47 1 2.2361 -5.2781 2.1852 48 1 0.4501 -5.5260 1.9621 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:26:59 Heat of formation + Delta-G solvation = 105.898201 kcal Electronic energy + Delta-G solvation = -32199.627829 eV Core-core repulsion = 27838.117904 eV Total energy + Delta-G solvation = -4361.509924 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -42.93144 -42.87646 -41.30625 -39.88964 -38.61481 -37.75870 -35.63639 -34.91674 -34.07569 -31.96771 -31.09201 -30.34389 -29.04294 -28.60165 -26.97115 -26.56583 -25.11661 -24.26353 -23.46629 -22.20251 -21.94556 -21.63314 -20.97211 -20.65773 -19.34205 -18.78865 -18.45430 -17.68766 -17.59703 -17.25931 -16.70643 -16.59879 -16.56025 -15.99982 -15.94488 -15.58329 -15.47364 -15.28606 -15.13511 -14.81094 -14.65653 -14.42652 -14.14072 -14.12121 -13.89042 -13.84362 -13.77353 -13.62606 -13.57648 -13.24878 -13.08877 -12.97321 -12.42038 -12.27013 -12.12687 -12.05009 -11.63536 -11.16631 -11.05990 -10.80483 -10.50468 -10.43506 -10.22126 -10.13184 -9.63519 -9.37221 -9.17210 -5.15900 -0.27344 -0.10061 1.18294 1.20591 1.33754 1.53000 1.61295 1.81127 1.86726 1.92247 2.05499 2.36771 2.79615 3.13515 3.21912 3.26930 3.40279 3.46095 3.50339 3.56549 3.58132 3.68243 3.72940 3.83988 3.88329 3.96298 4.03421 4.04688 4.15196 4.20600 4.24300 4.35937 4.41306 4.52654 4.55826 4.60314 4.61992 4.73228 4.76992 4.83888 4.85992 4.94886 5.02143 5.04803 5.16633 5.33386 5.36853 5.41017 5.52801 5.73417 5.88782 6.05666 6.29578 6.40241 6.58524 6.80682 7.18486 7.24302 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C 0.085 3.915 3 C -0.149 4.149 4 C -0.180 4.180 5 C -0.036 4.036 6 O -0.537 6.537 7 Si 0.686 3.314 8 C 0.070 3.930 9 N -0.570 5.570 10 C 0.308 3.692 11 N -0.504 5.504 12 C 0.180 3.820 13 C -0.236 4.236 14 C 0.573 3.427 15 O -0.528 6.528 16 N -0.719 5.719 17 C 0.128 3.872 18 H 0.119 0.881 19 C -0.137 4.137 20 C -0.126 4.126 21 H 0.103 0.897 22 C 0.116 3.884 23 N -0.458 5.458 24 C -0.054 4.054 25 C -0.031 4.031 26 N -0.495 5.495 27 C 0.180 3.820 28 C -0.146 4.146 29 H 0.088 0.912 30 H 0.096 0.904 31 H 0.067 0.933 32 H 0.116 0.884 33 H 0.378 0.622 34 H -0.252 1.252 35 H -0.255 1.255 36 H 0.186 0.814 37 H 0.426 0.574 38 H 0.161 0.839 39 H 0.399 0.601 40 H 0.083 0.917 41 H 0.092 0.908 42 H 0.097 0.903 43 H 0.093 0.907 44 H 0.171 0.829 45 H 0.168 0.832 46 H 0.203 0.797 47 H 0.087 0.913 48 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.727 5.414 -2.826 9.086 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.077 3.923 3 C -0.156 4.156 4 C -0.188 4.188 5 C -0.148 4.148 6 O -0.342 6.342 7 Si 0.587 3.413 8 C -0.057 4.057 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.217 5.217 12 C 0.012 3.988 13 C -0.243 4.243 14 C 0.361 3.639 15 O -0.405 6.405 16 N -0.371 5.371 17 C 0.023 3.977 18 H 0.137 0.863 19 C -0.175 4.175 20 C -0.146 4.146 21 H 0.121 0.879 22 C -0.006 4.006 23 N -0.141 5.141 24 C -0.187 4.187 25 C -0.179 4.179 26 N -0.213 5.213 27 C -0.103 4.103 28 C -0.185 4.185 29 H 0.107 0.893 30 H 0.114 0.886 31 H 0.086 0.914 32 H 0.133 0.867 33 H 0.225 0.775 34 H -0.177 1.177 35 H -0.180 1.180 36 H 0.203 0.797 37 H 0.264 0.736 38 H 0.178 0.822 39 H 0.235 0.765 40 H 0.102 0.898 41 H 0.110 0.890 42 H 0.116 0.884 43 H 0.112 0.888 44 H 0.189 0.811 45 H 0.186 0.814 46 H 0.220 0.780 47 H 0.105 0.895 48 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 5.835 5.175 -2.020 8.057 hybrid contribution 0.718 0.304 0.183 0.801 sum 6.553 5.479 -1.836 8.737 Atomic orbital electron populations 1.21175 0.88736 1.03554 1.04417 1.19936 0.97151 0.89223 0.86004 1.19470 0.92802 0.93569 1.09764 1.20692 0.95375 0.91078 1.11677 1.24520 0.90416 1.10600 0.89217 1.86537 1.53649 1.77816 1.16172 0.95322 0.84501 0.76731 0.84792 1.21735 0.84959 0.95808 1.03155 1.41516 1.09635 1.02693 1.63680 1.18492 0.89333 0.85904 0.98817 1.66438 1.40551 0.96016 1.18690 1.22482 0.90041 0.94434 0.91882 1.20423 0.94757 0.93729 1.15378 1.17918 0.86870 0.83344 0.75762 1.90768 1.13559 1.86981 1.49167 1.45861 1.10495 1.05449 1.75285 1.22446 0.97537 0.80640 0.97102 0.86341 1.23363 0.99843 0.94961 0.99360 1.22823 0.99755 0.94922 0.97061 0.87868 1.21915 0.93237 0.93948 0.91541 1.45568 1.41060 1.16524 1.10898 1.22722 1.07117 1.03171 0.85660 1.22347 1.03695 0.91916 0.99899 1.70312 1.21305 1.29675 1.00041 1.25034 0.99063 0.85796 1.00381 1.23598 1.03318 0.94337 0.97270 0.89343 0.88561 0.91393 0.86660 0.77521 1.17658 1.17958 0.79683 0.73555 0.82166 0.76529 0.89798 0.88993 0.88449 0.88841 0.81142 0.81442 0.78034 0.89463 0.90538 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.35 8.69 36.00 0.31 -0.04 16 2 C 0.09 0.24 5.98 -103.67 -0.62 -0.38 16 3 C -0.15 -0.32 6.16 -105.13 -0.65 -0.97 16 4 C -0.18 0.05 5.57 -102.73 -0.57 -0.52 16 5 C -0.04 0.03 2.07 36.01 0.07 0.10 16 6 O -0.54 0.17 12.88 -35.23 -0.45 -0.29 16 7 Si 0.69 -1.67 30.76 -169.99 -5.23 -6.90 16 8 C 0.07 -0.18 10.44 -16.69 -0.17 -0.36 16 9 N -0.57 0.86 6.04 -12.12 -0.07 0.79 16 10 C 0.31 0.53 8.42 -155.71 -1.31 -0.78 16 11 N -0.50 -0.99 10.37 -11.96 -0.12 -1.11 16 12 C 0.18 0.05 10.67 -17.11 -0.18 -0.13 16 13 C -0.24 -0.40 5.89 -104.82 -0.62 -1.02 16 14 C 0.57 1.01 7.72 -12.41 -0.10 0.92 16 15 O -0.53 -2.61 13.11 5.30 0.07 -2.54 16 16 N -0.72 1.23 5.31 -54.02 -0.29 0.94 16 17 C 0.13 -0.25 4.21 -67.12 -0.28 -0.54 16 18 H 0.12 0.01 7.50 -51.93 -0.39 -0.38 16 19 C -0.14 0.61 7.39 -25.92 -0.19 0.42 16 20 C -0.13 0.46 3.96 -89.72 -0.36 0.10 16 21 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 22 C 0.12 -0.44 5.99 -4.04 -0.02 -0.46 16 23 N -0.46 0.18 2.75 -118.57 -0.33 -0.14 16 24 C -0.05 -0.03 11.58 -16.56 -0.19 -0.23 16 25 C -0.03 -0.09 11.87 -17.82 -0.21 -0.30 16 26 N -0.50 -2.31 11.25 -14.67 -0.17 -2.47 16 27 C 0.18 0.25 12.56 -90.38 -1.14 -0.89 16 28 C -0.15 0.35 7.44 -25.83 -0.19 0.16 16 29 H 0.09 0.31 8.14 -51.93 -0.42 -0.11 16 30 H 0.10 0.38 5.95 -51.93 -0.31 0.07 16 31 H 0.07 0.15 5.05 -51.93 -0.26 -0.12 16 32 H 0.12 0.03 6.03 -51.93 -0.31 -0.28 16 33 H 0.38 -1.61 8.70 45.56 0.40 -1.21 16 34 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 35 H -0.25 0.00 7.11 56.52 0.40 0.41 16 36 H 0.19 -1.24 6.35 -52.49 -0.33 -1.57 16 37 H 0.43 -1.74 8.96 -40.82 -0.37 -2.11 16 38 H 0.16 -0.56 6.43 -52.49 -0.34 -0.90 16 39 H 0.40 -1.76 6.79 -40.82 -0.28 -2.04 16 40 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 41 H 0.09 -0.55 8.07 -51.93 -0.42 -0.97 16 42 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 43 H 0.09 -0.44 7.85 -51.93 -0.41 -0.85 16 44 H 0.17 -0.32 8.06 -52.48 -0.42 -0.74 16 45 H 0.17 0.20 8.06 -52.48 -0.42 -0.22 16 46 H 0.20 -0.38 8.06 -52.49 -0.42 -0.80 16 47 H 0.09 -0.27 7.90 -51.93 -0.41 -0.68 16 48 H 0.08 -0.03 8.14 -51.92 -0.42 -0.46 16 LS Contribution 393.78 15.07 5.93 5.93 Total: 0.00 -12.88 393.78 -13.08 -25.96 By element: Atomic # 1 Polarization: -9.23 SS G_CDS: -6.01 Total: -15.24 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -6.42 Total: -4.91 kcal Atomic # 7 Polarization: -1.03 SS G_CDS: -0.98 Total: -2.01 kcal Atomic # 8 Polarization: -2.45 SS G_CDS: -0.38 Total: -2.83 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: -5.23 Total: -6.90 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -12.88 -13.08 -25.96 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 131.856 kcal (2) G-P(sol) polarization free energy of solvation -12.876 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 118.980 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.082 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.957 kcal (6) G-S(sol) free energy of system = (1) + (5) 105.898 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds