Wall clock time and date at job start Sun Mar 7 2021 01:27:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.34662 * 124.84978 * 2 1 4 4 C 1.36767 * 108.39604 * 180.02562 * 3 2 1 5 5 C 1.47269 * 126.94379 * 179.97438 * 4 3 2 6 6 O 1.21626 * 120.00025 * 180.02562 * 5 4 3 7 7 N 1.34775 * 119.99535 * 0.03848 * 5 4 3 8 8 C 1.46499 * 119.99594 * 180.02562 * 7 5 4 9 9 H 1.09005 * 112.85378 * 23.80498 * 8 7 5 10 10 C 1.53780 * 113.61690 * 155.00083 * 8 7 5 11 11 C 1.53775 * 87.08250 * 139.97810 * 10 8 7 12 12 H 1.09000 * 113.61343 * 89.20377 * 11 10 8 13 13 C 1.53003 * 113.61309 * 220.01735 * 11 10 8 14 14 N 1.46501 * 109.46935 * 185.00014 * 13 11 10 15 15 C 1.36876 * 126.39787 * 269.71742 * 14 13 11 16 16 C 1.34680 * 106.81646 * 179.84326 * 15 14 13 17 17 N 1.34126 * 108.01623 * 0.41866 * 16 15 14 18 18 C 1.30497 * 109.25871 * 359.73409 * 17 16 15 19 19 C 1.53776 * 87.08111 * 334.56836 * 11 10 8 20 20 C 1.46686 * 106.11560 * 359.97438 * 4 3 2 21 21 C 1.34490 * 106.33531 * 0.02562 * 20 4 3 22 22 C 1.50696 * 125.57471 * 180.02562 * 21 20 4 23 23 O 1.42900 * 109.46994 * 150.02271 * 22 21 20 24 24 Si 1.86301 * 109.47100 * 30.02109 * 22 21 20 25 25 H 1.09005 * 109.47290 * 89.97228 * 1 2 3 26 26 H 1.08999 * 109.47321 * 209.97485 * 1 2 3 27 27 H 1.08999 * 109.47047 * 329.97739 * 1 2 3 28 28 H 1.07997 * 125.80507 * 0.04371 * 3 2 1 29 29 H 0.96995 * 120.00306 * 0.02562 * 7 5 4 30 30 H 1.09005 * 113.61346 * 254.53270 * 10 8 7 31 31 H 1.08999 * 113.61246 * 25.34503 * 10 8 7 32 32 H 1.08993 * 109.47330 * 304.99923 * 13 11 10 33 33 H 1.08997 * 109.46722 * 65.00627 * 13 11 10 34 34 H 1.07993 * 126.59619 * 359.97438 * 15 14 13 35 35 H 1.07996 * 125.98970 * 180.11865 * 16 15 14 36 36 H 1.08004 * 125.64495 * 179.97438 * 18 17 16 37 37 H 1.08996 * 113.61464 * 270.87619 * 19 11 10 38 38 H 1.09005 * 113.61197 * 139.98151 * 19 11 10 39 39 H 1.08004 * 126.83660 * 179.73912 * 20 4 3 40 40 H 1.08998 * 109.47262 * 270.02256 * 22 21 20 41 41 H 0.96699 * 113.99871 * 299.99169 * 23 22 21 42 42 H 1.48496 * 110.00195 * 58.68422 * 24 22 21 43 43 H 1.48508 * 109.99786 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2344 1.1051 0.0000 4 6 3.5461 0.7177 -0.0006 5 6 4.7284 1.5958 -0.0013 6 8 5.8446 1.1128 -0.0023 7 7 4.5733 2.9346 -0.0007 8 6 5.7494 3.8082 -0.0020 9 1 6.6367 3.3229 -0.4088 10 6 5.4817 5.2008 -0.5966 11 6 6.3676 5.7644 0.5269 12 1 7.4245 5.8160 0.2652 13 6 5.8400 7.0690 1.1274 14 7 6.8071 7.5856 2.0990 15 6 6.8410 7.3062 3.4385 16 6 7.8866 7.9827 3.9513 17 7 8.4694 8.6640 2.9537 18 6 7.8282 8.4310 1.8413 19 6 5.9930 4.5152 1.3417 20 6 3.5375 -0.7491 -0.0003 21 6 2.2446 -1.1197 -0.0002 22 6 1.7397 -2.5396 0.0006 23 8 0.4804 -2.5969 0.6737 24 14 2.9644 -3.6337 0.8802 25 1 -0.3634 0.0005 -1.0277 26 1 -0.3634 -0.8902 0.5134 27 1 -0.3633 0.8898 0.5142 28 1 1.8767 2.1241 0.0007 29 1 3.6831 3.3198 0.0006 30 1 5.9008 5.3378 -1.5936 31 1 4.4390 5.5112 -0.5295 32 1 5.6953 7.8019 0.3338 33 1 4.8892 6.8809 1.6261 34 1 6.1614 6.6647 3.9798 35 1 8.1979 7.9810 4.9854 36 1 8.0733 8.8459 0.8747 37 1 5.0904 4.6388 1.9401 38 1 6.8249 4.0988 1.9097 39 1 4.3980 -1.4017 -0.0046 40 1 1.6184 -2.8827 -1.0268 41 1 0.5134 -2.3053 1.5951 42 1 3.1626 -3.1574 2.2726 43 1 2.4783 -5.0370 0.8873 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:27:25 Heat of formation + Delta-G solvation = 82.097083 kcal Electronic energy + Delta-G solvation = -25546.393706 eV Core-core repulsion = 21789.493639 eV Total energy + Delta-G solvation = -3756.900067 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.91420 -42.54182 -40.96456 -39.21292 -38.05076 -35.36112 -34.08016 -33.70723 -31.46548 -30.35227 -28.93245 -27.68776 -26.92892 -26.43524 -24.65183 -23.05155 -22.19622 -21.72061 -21.30975 -20.85783 -20.45507 -19.07592 -18.47792 -17.59959 -17.25200 -17.00280 -16.89764 -16.43389 -16.00372 -15.88974 -15.67941 -15.45380 -15.17963 -15.03115 -14.80865 -14.55298 -14.30272 -14.16238 -14.10997 -13.74712 -13.63013 -13.57867 -13.37724 -13.20143 -12.98016 -12.42744 -12.33855 -12.08292 -11.97323 -11.59581 -11.00847 -10.82517 -10.78784 -10.45189 -10.03631 -9.61744 -9.36713 -9.28014 -4.96733 0.69667 0.98483 1.18864 1.38782 1.61181 1.74459 1.83080 1.98998 2.25792 2.37235 2.61475 2.97880 3.18209 3.28886 3.45758 3.52568 3.62196 3.69423 3.71633 3.86181 3.89003 3.96127 4.03577 4.09750 4.13844 4.21200 4.33936 4.39550 4.43771 4.49618 4.56066 4.59169 4.64655 4.78333 4.85201 4.87096 4.88169 4.93512 5.13607 5.37568 5.50230 5.63455 5.89013 5.89282 6.07374 6.12028 6.30077 6.59155 7.24733 7.40828 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.426 5.426 3 C 0.049 3.951 4 C -0.228 4.228 5 C 0.592 3.408 6 O -0.539 6.539 7 N -0.723 5.723 8 C 0.129 3.871 9 H 0.118 0.882 10 C -0.137 4.137 11 C -0.126 4.126 12 H 0.103 0.897 13 C 0.117 3.883 14 N -0.458 5.458 15 C -0.054 4.054 16 C -0.031 4.031 17 N -0.495 5.495 18 C 0.179 3.821 19 C -0.146 4.146 20 C -0.129 4.129 21 C -0.022 4.022 22 C -0.049 4.049 23 O -0.532 6.532 24 Si 0.712 3.288 25 H 0.075 0.925 26 H 0.111 0.889 27 H 0.081 0.919 28 H 0.169 0.831 29 H 0.397 0.603 30 H 0.082 0.918 31 H 0.090 0.910 32 H 0.097 0.903 33 H 0.092 0.908 34 H 0.171 0.829 35 H 0.168 0.832 36 H 0.203 0.797 37 H 0.086 0.914 38 H 0.075 0.925 39 H 0.158 0.842 40 H 0.123 0.877 41 H 0.378 0.622 42 H -0.256 1.256 43 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.978 0.332 -2.401 7.387 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.100 5.100 3 C -0.087 4.087 4 C -0.238 4.238 5 C 0.381 3.619 6 O -0.417 6.417 7 N -0.374 5.374 8 C 0.023 3.977 9 H 0.136 0.864 10 C -0.176 4.176 11 C -0.146 4.146 12 H 0.121 0.879 13 C -0.006 4.006 14 N -0.140 5.140 15 C -0.187 4.187 16 C -0.179 4.179 17 N -0.213 5.213 18 C -0.103 4.103 19 C -0.185 4.185 20 C -0.153 4.153 21 C -0.131 4.131 22 C -0.158 4.158 23 O -0.339 6.339 24 Si 0.611 3.389 25 H 0.094 0.906 26 H 0.129 0.871 27 H 0.100 0.900 28 H 0.186 0.814 29 H 0.231 0.769 30 H 0.101 0.899 31 H 0.108 0.892 32 H 0.115 0.885 33 H 0.111 0.889 34 H 0.189 0.811 35 H 0.186 0.814 36 H 0.220 0.780 37 H 0.104 0.896 38 H 0.094 0.906 39 H 0.176 0.824 40 H 0.140 0.860 41 H 0.226 0.774 42 H -0.180 1.180 43 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges -6.023 -0.378 -2.323 6.466 hybrid contribution -2.181 0.406 0.500 2.275 sum -8.204 0.028 -1.822 8.404 Atomic orbital electron populations 1.22554 0.76367 1.05845 1.04362 1.43488 1.06995 1.04972 1.54550 1.21915 0.90153 0.91770 1.04859 1.20304 0.91440 0.94002 1.18074 1.17434 0.88085 0.81337 0.75017 1.90792 1.25816 1.75132 1.49912 1.45787 1.09144 1.05795 1.76627 1.22400 0.90249 0.88600 0.96412 0.86370 1.23364 1.00504 0.94883 0.98817 1.22796 1.01118 0.93230 0.97439 0.87874 1.21914 0.91213 0.95957 0.91532 1.45571 1.24632 1.35808 1.08036 1.22719 1.04539 1.07500 0.83912 1.22350 0.96139 1.00039 0.99335 1.70313 1.28399 1.23923 0.98702 1.25034 0.88748 0.96464 1.00035 1.23561 1.02340 0.95251 0.97350 1.21641 0.94835 0.93075 1.05786 1.20763 0.90702 0.89014 1.12597 1.24789 0.92659 0.94789 1.03607 1.86554 1.29781 1.88550 1.29036 0.94172 0.85199 0.77461 0.82111 0.90626 0.87098 0.90032 0.81367 0.76899 0.89922 0.89197 0.88511 0.88921 0.81147 0.81437 0.78037 0.89592 0.90584 0.82436 0.85969 0.77404 1.18044 1.17754 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.18 10.71 59.84 0.64 0.47 16 2 N -0.43 0.50 3.09 -119.90 -0.37 0.13 16 3 C 0.05 -0.07 10.83 -16.84 -0.18 -0.25 16 4 C -0.23 -0.28 6.29 -103.35 -0.65 -0.93 16 5 C 0.59 1.46 7.81 -12.59 -0.10 1.37 16 6 O -0.54 -3.57 16.57 5.25 0.09 -3.48 16 7 N -0.72 0.92 5.34 -54.14 -0.29 0.63 16 8 C 0.13 -0.19 4.24 -67.12 -0.28 -0.48 16 9 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 10 C -0.14 0.57 7.39 -25.92 -0.19 0.38 16 11 C -0.13 0.43 3.96 -89.81 -0.36 0.07 16 12 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 13 C 0.12 -0.43 5.99 -4.04 -0.02 -0.46 16 14 N -0.46 0.17 2.75 -118.58 -0.33 -0.16 16 15 C -0.05 -0.03 11.58 -16.56 -0.19 -0.23 16 16 C -0.03 -0.09 11.87 -17.81 -0.21 -0.30 16 17 N -0.50 -2.31 11.25 -14.66 -0.16 -2.47 16 18 C 0.18 0.25 12.56 -90.38 -1.14 -0.88 16 19 C -0.15 0.31 7.43 -25.92 -0.19 0.12 16 20 C -0.13 -0.16 9.49 -37.50 -0.36 -0.51 16 21 C -0.02 0.00 6.14 -81.87 -0.50 -0.50 16 22 C -0.05 0.07 2.98 36.00 0.11 0.17 16 23 O -0.53 0.68 9.95 -35.23 -0.35 0.33 16 24 Si 0.71 -0.94 31.12 -169.99 -5.29 -6.23 16 25 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 26 H 0.11 -0.39 4.93 -51.93 -0.26 -0.65 16 27 H 0.08 -0.43 8.13 -51.93 -0.42 -0.85 16 28 H 0.17 -0.85 7.45 -52.49 -0.39 -1.24 16 29 H 0.40 -1.68 7.67 -40.82 -0.31 -1.99 16 30 H 0.08 -0.33 8.14 -51.93 -0.42 -0.76 16 31 H 0.09 -0.51 8.08 -51.93 -0.42 -0.93 16 32 H 0.10 -0.49 8.14 -51.93 -0.42 -0.91 16 33 H 0.09 -0.44 7.84 -51.93 -0.41 -0.84 16 34 H 0.17 -0.32 8.06 -52.49 -0.42 -0.75 16 35 H 0.17 0.20 8.06 -52.49 -0.42 -0.23 16 36 H 0.20 -0.37 8.06 -52.48 -0.42 -0.79 16 37 H 0.09 -0.25 7.90 -51.93 -0.41 -0.66 16 38 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 39 H 0.16 0.05 6.90 -52.48 -0.36 -0.31 16 40 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 41 H 0.38 -1.40 8.38 45.56 0.38 -1.02 16 42 H -0.26 -0.36 7.11 56.52 0.40 0.05 16 43 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 LS Contribution 361.15 15.07 5.44 5.44 Total: 0.00 -11.46 361.15 -10.87 -22.33 By element: Atomic # 1 Polarization: -8.59 SS G_CDS: -5.98 Total: -14.57 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -3.63 Total: -1.96 kcal Atomic # 7 Polarization: -0.72 SS G_CDS: -1.15 Total: -1.87 kcal Atomic # 8 Polarization: -2.89 SS G_CDS: -0.26 Total: -3.15 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.29 Total: -6.23 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -11.46 -10.87 -22.33 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 104.427 kcal (2) G-P(sol) polarization free energy of solvation -11.460 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.968 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.330 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.097 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds