Wall clock time and date at job start Sun Mar 7 2021 01:27:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47093 * 2 1 4 4 C 1.50698 * 109.47193 * 239.99962 * 2 1 3 5 5 C 1.38353 * 120.34950 * 300.00356 * 4 2 1 6 6 C 1.40017 * 118.29337 * 180.02562 * 5 4 2 7 7 C 1.47843 * 120.56323 * 180.02562 * 6 5 4 8 8 O 1.21551 * 119.99841 * 359.97438 * 7 6 5 9 9 N 1.34772 * 120.00145 * 180.02562 * 7 6 5 10 10 C 1.46501 * 120.00042 * 179.97438 * 9 7 6 11 11 H 1.08998 * 112.84866 * 23.80678 * 10 9 7 12 12 C 1.53787 * 113.61128 * 154.99929 * 10 9 7 13 13 C 1.53784 * 87.07923 * 139.98386 * 12 10 9 14 14 H 1.09002 * 113.61478 * 89.11632 * 13 12 10 15 15 C 1.52994 * 113.61233 * 220.01769 * 13 12 10 16 16 N 1.46502 * 109.47057 * 185.00081 * 15 13 12 17 17 C 1.36879 * 126.39821 * 89.99896 * 16 15 13 18 18 C 1.34673 * 106.81695 * 180.02562 * 17 16 15 19 19 N 1.34129 * 108.02027 * 0.02562 * 18 17 16 20 20 C 1.30497 * 109.25635 * 359.72305 * 19 18 17 21 21 C 1.53779 * 87.08045 * 334.56667 * 13 12 10 22 22 C 1.39523 * 118.87820 * 0.27392 * 6 5 4 23 23 N 1.31698 * 120.56574 * 359.44790 * 22 6 5 24 24 C 1.31925 * 121.87601 * 0.54824 * 23 22 6 25 25 H 0.96699 * 114.00173 * 59.99895 * 1 2 3 26 26 H 1.09003 * 109.46909 * 119.99714 * 2 1 3 27 27 H 1.48501 * 110.00115 * 59.99985 * 3 2 1 28 28 H 1.48500 * 109.99936 * 181.32168 * 3 2 1 29 29 H 1.08009 * 120.85376 * 0.04104 * 5 4 2 30 30 H 0.97005 * 119.99829 * 359.97438 * 9 7 6 31 31 H 1.09004 * 113.61202 * 254.53139 * 12 10 9 32 32 H 1.08994 * 113.61447 * 25.43570 * 12 10 9 33 33 H 1.08994 * 109.47510 * 304.99618 * 15 13 12 34 34 H 1.09001 * 109.47575 * 65.00169 * 15 13 12 35 35 H 1.07994 * 126.59193 * 0.03521 * 17 16 15 36 36 H 1.08003 * 125.98806 * 179.97438 * 18 17 16 37 37 H 1.08005 * 125.65230 * 180.29484 * 20 19 18 38 38 H 1.09006 * 113.61307 * 270.88660 * 21 13 12 39 39 H 1.09007 * 113.61642 * 139.98417 * 21 13 12 40 40 H 1.08005 * 119.71469 * 179.73092 * 22 6 5 41 41 H 1.08005 * 119.45402 * 179.72718 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.6015 -2.0349 -1.4566 6 6 2.0920 -2.6528 -2.6133 7 6 1.7702 -4.0660 -2.9048 8 8 1.0746 -4.7017 -2.1371 9 7 2.2489 -4.6497 -4.0213 10 6 1.9304 -6.0502 -4.3099 11 1 1.0153 -6.3854 -3.8218 12 6 1.9946 -6.4009 -5.8059 13 6 2.6447 -7.7298 -5.3860 14 1 1.9255 -8.5255 -5.1916 15 6 3.7867 -8.1703 -6.3038 16 7 4.2585 -9.4955 -5.8946 17 6 3.7920 -10.6997 -6.3484 18 6 4.4986 -11.6552 -5.7147 19 7 5.3723 -11.0508 -4.8959 20 6 5.2381 -9.7572 -5.0025 21 6 3.1199 -7.0052 -4.1156 22 6 2.8941 -1.9138 -3.4835 23 7 3.1760 -0.6532 -3.2270 24 6 2.7276 -0.0452 -2.1455 25 1 -0.3933 0.4417 -0.7650 26 1 1.7923 -0.5138 0.8900 27 1 1.5615 2.4679 1.2085 28 1 3.5346 1.7703 -0.0322 29 1 0.9813 -2.5782 -0.7589 30 1 2.8043 -4.1424 -4.6339 31 1 1.0150 -6.5210 -6.2686 32 1 2.6575 -5.7522 -6.3783 33 1 3.4298 -8.2136 -7.3328 34 1 4.6062 -7.4551 -6.2332 35 1 3.0081 -10.8540 -7.0750 36 1 4.3815 -12.7212 -5.8427 37 1 5.8135 -9.0181 -4.4647 38 1 4.0906 -6.5217 -4.2260 39 1 3.0489 -7.6132 -3.2136 40 1 3.2834 -2.3783 -4.3775 41 1 2.9866 0.9888 -1.9716 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:27:36 Heat of formation + Delta-G solvation = 69.331941 kcal Electronic energy + Delta-G solvation = -24825.350814 eV Core-core repulsion = 21095.208687 eV Total energy + Delta-G solvation = -3730.142126 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -42.96151 -42.03526 -40.98951 -39.49376 -38.03881 -35.60882 -34.32623 -33.82441 -32.91205 -30.37304 -29.01699 -27.39598 -27.04652 -26.20881 -24.09469 -23.72056 -22.24695 -21.92244 -21.68171 -20.95945 -19.28113 -18.67722 -18.24765 -17.95605 -17.78755 -17.11273 -16.66934 -16.47056 -16.17344 -16.03802 -15.79911 -15.46714 -15.10009 -14.81359 -14.77114 -14.47186 -14.36255 -14.30727 -14.09167 -13.85085 -13.65632 -13.59645 -13.21011 -12.81852 -12.50504 -12.21621 -12.17818 -11.73988 -11.40490 -11.12981 -10.83138 -10.71702 -10.64820 -10.51001 -10.41140 -10.22931 -9.41012 -5.20714 -0.66464 -0.10095 1.07158 1.14207 1.46076 1.61382 1.75048 1.81846 1.89265 2.33540 2.54380 2.91963 3.07921 3.17420 3.23234 3.29526 3.40240 3.46663 3.52296 3.60508 3.66821 3.77638 3.84570 3.91041 3.97325 4.01830 4.08437 4.13237 4.32922 4.34772 4.45304 4.49214 4.57514 4.65651 4.75127 4.76226 4.81618 4.83219 4.95202 5.19901 5.29049 5.32715 5.85268 6.20186 6.25797 6.37706 6.53952 6.95535 7.20995 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.065 4.065 3 Si 0.689 3.311 4 C -0.179 4.179 5 C 0.012 3.988 6 C -0.189 4.189 7 C 0.566 3.434 8 O -0.526 6.526 9 N -0.715 5.715 10 C 0.125 3.875 11 H 0.120 0.880 12 C -0.136 4.136 13 C -0.125 4.125 14 H 0.103 0.897 15 C 0.116 3.884 16 N -0.458 5.458 17 C -0.058 4.058 18 C -0.029 4.029 19 N -0.496 5.496 20 C 0.183 3.817 21 C -0.148 4.148 22 C 0.139 3.861 23 N -0.477 5.477 24 C 0.128 3.872 25 H 0.381 0.619 26 H 0.120 0.880 27 H -0.248 1.248 28 H -0.253 1.253 29 H 0.153 0.847 30 H 0.401 0.599 31 H 0.084 0.916 32 H 0.093 0.907 33 H 0.095 0.905 34 H 0.096 0.904 35 H 0.173 0.827 36 H 0.169 0.831 37 H 0.201 0.799 38 H 0.089 0.911 39 H 0.077 0.923 40 H 0.161 0.839 41 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.965 5.104 -5.928 7.882 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.590 3.410 4 C -0.181 4.181 5 C -0.015 4.015 6 C -0.195 4.195 7 C 0.353 3.647 8 O -0.402 6.402 9 N -0.367 5.367 10 C 0.021 3.979 11 H 0.138 0.862 12 C -0.175 4.175 13 C -0.145 4.145 14 H 0.122 0.878 15 C -0.006 4.006 16 N -0.141 5.141 17 C -0.190 4.190 18 C -0.177 4.177 19 N -0.214 5.214 20 C -0.100 4.100 21 C -0.187 4.187 22 C -0.019 4.019 23 N -0.185 5.185 24 C -0.028 4.028 25 H 0.228 0.772 26 H 0.138 0.862 27 H -0.172 1.172 28 H -0.177 1.177 29 H 0.170 0.830 30 H 0.237 0.763 31 H 0.102 0.898 32 H 0.111 0.889 33 H 0.114 0.886 34 H 0.114 0.886 35 H 0.191 0.809 36 H 0.186 0.814 37 H 0.218 0.782 38 H 0.108 0.892 39 H 0.096 0.904 40 H 0.178 0.822 41 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 0.132 5.125 -4.510 6.828 hybrid contribution -0.719 -0.484 -0.146 0.879 sum -0.587 4.641 -4.656 6.600 Atomic orbital electron populations 1.86549 1.16611 1.81631 1.49294 1.25036 0.85620 1.10334 0.96627 0.94826 0.81073 0.77138 0.87987 1.21448 1.01363 0.95799 0.99479 1.21640 0.92665 0.92922 0.94222 1.21030 1.04074 0.95565 0.98787 1.18056 0.79472 0.85886 0.81309 1.90830 1.37417 1.64623 1.47356 1.45862 1.53438 1.13080 1.24304 1.22511 0.99551 0.79857 0.96006 0.86203 1.23376 1.02268 0.95886 0.95973 1.22787 0.97796 0.97415 0.96516 0.87841 1.21908 0.97482 0.81799 0.99438 1.45570 1.28762 1.06756 1.33039 1.22759 1.05398 0.84555 1.06331 1.22363 0.97053 0.99761 0.98538 1.70320 1.23901 1.04558 1.22592 1.24992 0.94181 0.94655 0.96123 1.23595 0.98925 0.97781 0.98364 1.23016 0.91889 0.89742 0.97302 1.67726 1.21501 1.10122 1.19133 1.22912 0.91514 0.99712 0.88627 0.77188 0.86226 1.17244 1.17740 0.82972 0.76313 0.89772 0.88899 0.88629 0.88597 0.80945 0.81374 0.78223 0.89247 0.90383 0.82223 0.81989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.44 12.78 -35.23 -0.45 -0.01 16 2 C -0.06 0.10 2.83 36.00 0.10 0.20 16 3 Si 0.69 -1.78 29.82 -169.99 -5.07 -6.85 16 4 C -0.18 0.17 5.39 -104.54 -0.56 -0.39 16 5 C 0.01 0.00 9.31 -38.87 -0.36 -0.36 16 6 C -0.19 0.04 5.89 -104.82 -0.62 -0.58 16 7 C 0.57 0.45 7.78 -12.33 -0.10 0.35 16 8 O -0.53 -2.56 16.02 5.32 0.09 -2.48 16 9 N -0.72 1.89 5.31 -53.96 -0.29 1.60 16 10 C 0.13 -0.33 4.24 -67.12 -0.28 -0.62 16 11 H 0.12 -0.06 7.46 -51.93 -0.39 -0.44 16 12 C -0.14 0.70 7.39 -25.91 -0.19 0.50 16 13 C -0.13 0.52 3.96 -89.81 -0.36 0.16 16 14 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 15 C 0.12 -0.50 5.99 -4.04 -0.02 -0.52 16 16 N -0.46 0.35 2.75 -118.58 -0.33 0.02 16 17 C -0.06 -0.01 11.58 -16.56 -0.19 -0.20 16 18 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 19 N -0.50 -2.21 11.25 -14.66 -0.16 -2.37 16 20 C 0.18 0.22 12.56 -90.37 -1.14 -0.92 16 21 C -0.15 0.46 7.43 -25.92 -0.19 0.27 16 22 C 0.14 -0.22 10.71 -17.13 -0.18 -0.40 16 23 N -0.48 0.06 10.35 -12.91 -0.13 -0.08 16 24 C 0.13 -0.15 9.84 -17.47 -0.17 -0.32 16 25 H 0.38 -1.82 8.70 45.56 0.40 -1.42 16 26 H 0.12 -0.13 7.96 -51.93 -0.41 -0.55 16 27 H -0.25 -0.21 7.11 56.52 0.40 0.20 16 28 H -0.25 0.12 7.11 56.52 0.40 0.52 16 29 H 0.15 0.20 7.74 -52.48 -0.41 -0.21 16 30 H 0.40 -2.22 6.79 -40.82 -0.28 -2.50 16 31 H 0.08 -0.41 8.14 -51.93 -0.42 -0.83 16 32 H 0.09 -0.62 8.08 -51.93 -0.42 -1.04 16 33 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 34 H 0.10 -0.54 7.84 -51.93 -0.41 -0.95 16 35 H 0.17 -0.45 8.06 -52.49 -0.42 -0.87 16 36 H 0.17 0.13 8.06 -52.48 -0.42 -0.29 16 37 H 0.20 -0.36 8.06 -52.48 -0.42 -0.78 16 38 H 0.09 -0.37 7.90 -51.93 -0.41 -0.78 16 39 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.16 -0.80 6.42 -52.48 -0.34 -1.14 16 41 H 0.16 -0.54 4.88 -52.48 -0.26 -0.79 16 LS Contribution 349.79 15.07 5.27 5.27 Total: 0.00 -11.38 349.79 -10.63 -22.01 By element: Atomic # 1 Polarization: -8.94 SS G_CDS: -5.07 Total: -14.01 kcal Atomic # 6 Polarization: 1.37 SS G_CDS: -4.48 Total: -3.11 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: -0.91 Total: -0.82 kcal Atomic # 8 Polarization: -2.12 SS G_CDS: -0.36 Total: -2.49 kcal Atomic # 14 Polarization: -1.78 SS G_CDS: -5.07 Total: -6.85 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -11.38 -10.63 -22.01 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.342 kcal (2) G-P(sol) polarization free energy of solvation -11.382 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 79.960 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.628 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.010 kcal (6) G-S(sol) free energy of system = (1) + (5) 69.332 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds