Wall clock time and date at job start Sun Mar 7 2021 01:27:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37784 * 119.84826 * 2 1 4 4 C 1.39709 * 119.90634 * 180.02562 * 3 2 1 5 5 C 1.47536 * 120.19178 * 179.97438 * 4 3 2 6 6 O 1.21593 * 119.99802 * 179.97438 * 5 4 3 7 7 N 1.34774 * 119.99904 * 0.02562 * 5 4 3 8 8 C 1.46506 * 119.99952 * 179.97438 * 7 5 4 9 9 H 1.09002 * 112.84852 * 25.33640 * 8 7 5 10 10 C 1.53781 * 113.61361 * 156.53041 * 8 7 5 11 11 C 1.53782 * 87.08260 * 139.98338 * 10 8 7 12 12 H 1.09000 * 113.61104 * 89.19387 * 11 10 8 13 13 C 1.52994 * 113.61451 * 220.01963 * 11 10 8 14 14 N 1.46497 * 109.47067 * 184.99710 * 13 11 10 15 15 C 1.36879 * 126.40114 * 269.71403 * 14 13 11 16 16 C 1.34664 * 106.82093 * 179.84118 * 15 14 13 17 17 N 1.34132 * 108.01893 * 0.42074 * 16 15 14 18 18 C 1.30489 * 109.25607 * 359.73467 * 17 16 15 19 19 C 1.53773 * 113.61686 * 254.13880 * 8 7 5 20 20 C 1.40140 * 119.61586 * 0.25407 * 4 3 2 21 21 O 1.35654 * 120.14674 * 179.72047 * 20 4 3 22 22 C 1.38704 * 119.70036 * 359.49677 * 20 4 3 23 23 C 1.50701 * 119.96165 * 180.27324 * 22 20 4 24 24 O 1.42904 * 109.46844 * 285.23181 * 23 22 20 25 25 Si 1.86298 * 109.47370 * 165.23074 * 23 22 20 26 26 C 1.38060 * 120.08164 * 0.50424 * 22 20 4 27 27 H 1.09006 * 109.47262 * 89.99736 * 1 2 3 28 28 H 1.08996 * 109.47051 * 209.99916 * 1 2 3 29 29 H 1.09000 * 109.46994 * 330.00086 * 1 2 3 30 30 H 1.08004 * 120.04838 * 0.04596 * 3 2 1 31 31 H 0.96997 * 120.00341 * 359.97438 * 7 5 4 32 32 H 1.09005 * 113.61233 * 254.53068 * 10 8 7 33 33 H 1.08999 * 113.61553 * 25.43257 * 10 8 7 34 34 H 1.09002 * 109.47006 * 304.99942 * 13 11 10 35 35 H 1.08998 * 109.47453 * 64.99864 * 13 11 10 36 36 H 1.08003 * 126.59055 * 359.97438 * 15 14 13 37 37 H 1.08005 * 125.99441 * 180.19095 * 16 15 14 38 38 H 1.07998 * 125.65302 * 179.97438 * 18 17 16 39 39 H 1.09000 * 113.61464 * 334.56586 * 19 8 7 40 40 H 1.09003 * 113.61910 * 105.46867 * 19 8 7 41 41 H 0.96705 * 113.99589 * 90.00769 * 21 20 4 42 42 H 1.09001 * 109.46868 * 45.23398 * 23 22 20 43 43 H 0.96693 * 114.00042 * 299.99455 * 24 23 22 44 44 H 1.48502 * 110.00079 * 179.97438 * 25 23 22 45 45 H 1.48500 * 110.00042 * 301.32228 * 25 23 22 46 46 H 1.07998 * 119.80407 * 179.76968 * 26 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5899 1.1965 -0.0005 5 6 4.3305 2.4725 -0.0011 6 8 5.5464 2.4696 -0.0011 7 7 3.6594 3.6412 -0.0006 8 6 4.3948 4.9083 -0.0006 9 1 5.3923 4.8186 -0.4309 10 6 3.5860 6.0900 -0.5612 11 6 4.2023 6.9422 0.5608 12 1 5.1470 7.4105 0.2846 13 6 3.2160 7.9236 1.1970 14 7 3.9220 8.7668 2.1649 15 6 4.0932 8.5051 3.4975 16 6 4.7979 9.5323 4.0090 17 7 5.0422 10.4022 3.0178 18 6 4.5205 9.9503 1.9103 19 6 4.3716 5.6341 1.3549 20 6 4.2836 -0.0211 -0.0065 21 8 5.6401 -0.0323 -0.0128 22 6 3.5771 -1.2147 -0.0012 23 6 4.3172 -2.5274 -0.0013 24 8 4.8544 -2.7712 -1.3029 25 14 3.1446 -3.9016 0.4540 26 6 2.1965 -1.2016 -0.0006 27 1 -0.3634 0.0000 -1.0277 28 1 -0.3633 -0.8900 0.5138 29 1 -0.3633 0.8900 0.5138 30 1 1.6511 2.1294 0.0007 31 1 2.6894 3.6435 -0.0002 32 1 3.8948 6.3952 -1.5610 33 1 2.5073 5.9628 -0.4706 34 1 2.7762 8.5507 0.4215 35 1 2.4279 7.3684 1.7057 36 1 3.7341 7.6398 4.0350 37 1 5.1084 9.6390 5.0380 38 1 4.5604 10.4416 0.9494 39 1 3.5080 5.3821 1.9703 40 1 5.3136 5.5718 1.8998 41 1 6.0375 -0.0376 0.8688 42 1 5.1289 -2.4869 0.7251 43 1 4.1871 -2.8199 -2.0010 44 1 3.8622 -5.2017 0.4568 45 1 2.5547 -3.6435 1.7921 46 1 1.6509 -2.1336 -0.0002 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:27:49 Heat of formation + Delta-G solvation = 12.352023 kcal Electronic energy + Delta-G solvation = -29353.892556 eV Core-core repulsion = 25212.485695 eV Total energy + Delta-G solvation = -4141.406861 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.94984 -41.85875 -40.81366 -39.29272 -38.06436 -37.59830 -35.46540 -34.21038 -33.16866 -32.63512 -30.38970 -28.91686 -27.73261 -27.01563 -26.87381 -25.68189 -23.68513 -22.24135 -22.12076 -21.82417 -21.52520 -20.83970 -19.61442 -18.57798 -18.43990 -17.93237 -17.54097 -16.96051 -16.83694 -16.63210 -16.07614 -15.99529 -15.86204 -15.51588 -15.26286 -14.98971 -14.97818 -14.81755 -14.71522 -14.35014 -14.24468 -14.14679 -13.84658 -13.80083 -13.65267 -13.48514 -13.14305 -13.06527 -12.68593 -12.48220 -12.21461 -12.16690 -12.08531 -11.73769 -11.67444 -10.89676 -10.82809 -10.50851 -10.40724 -10.28077 -10.09922 -9.61427 -9.40085 -5.14695 -0.42458 -0.03117 1.15254 1.17531 1.54150 1.68380 1.78603 1.88102 2.01521 2.34110 2.49487 3.08649 3.11590 3.20730 3.30176 3.40201 3.44987 3.49493 3.55044 3.61162 3.79903 3.85524 3.91149 3.95638 3.99565 4.01806 4.12396 4.19855 4.33958 4.35916 4.45493 4.48592 4.49529 4.52353 4.58433 4.62026 4.71336 4.79263 4.82092 4.83148 4.88006 4.99749 5.09604 5.21121 5.33826 5.37330 5.48645 5.85999 6.26610 6.35623 6.55934 6.69336 7.14634 7.21595 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.068 4.068 4 C -0.165 4.165 5 C 0.560 3.440 6 O -0.515 6.515 7 N -0.720 5.720 8 C 0.127 3.873 9 H 0.118 0.882 10 C -0.136 4.136 11 C -0.126 4.126 12 H 0.103 0.897 13 C 0.117 3.883 14 N -0.458 5.458 15 C -0.054 4.054 16 C -0.031 4.031 17 N -0.495 5.495 18 C 0.180 3.820 19 C -0.146 4.146 20 C 0.190 3.810 21 O -0.467 6.467 22 C -0.153 4.153 23 C -0.059 4.059 24 O -0.530 6.530 25 Si 0.683 3.317 26 C -0.072 4.072 27 H 0.077 0.923 28 H 0.072 0.928 29 H 0.070 0.930 30 H 0.130 0.870 31 H 0.399 0.601 32 H 0.084 0.916 33 H 0.091 0.909 34 H 0.097 0.903 35 H 0.093 0.907 36 H 0.171 0.829 37 H 0.169 0.831 38 H 0.203 0.797 39 H 0.086 0.914 40 H 0.076 0.924 41 H 0.393 0.607 42 H 0.112 0.888 43 H 0.377 0.623 44 H -0.251 1.251 45 H -0.255 1.255 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.789 -2.231 -1.718 10.186 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.097 4.097 3 C -0.087 4.087 4 C -0.169 4.169 5 C 0.348 3.652 6 O -0.391 6.391 7 N -0.372 5.372 8 C 0.022 3.978 9 H 0.136 0.864 10 C -0.175 4.175 11 C -0.145 4.145 12 H 0.122 0.878 13 C -0.006 4.006 14 N -0.141 5.141 15 C -0.187 4.187 16 C -0.178 4.178 17 N -0.213 5.213 18 C -0.102 4.102 19 C -0.185 4.185 20 C 0.143 3.857 21 O -0.277 6.277 22 C -0.155 4.155 23 C -0.170 4.170 24 O -0.335 6.335 25 Si 0.584 3.416 26 C -0.090 4.090 27 H 0.096 0.904 28 H 0.091 0.909 29 H 0.089 0.911 30 H 0.148 0.852 31 H 0.234 0.766 32 H 0.102 0.898 33 H 0.109 0.891 34 H 0.116 0.884 35 H 0.111 0.889 36 H 0.188 0.812 37 H 0.186 0.814 38 H 0.220 0.780 39 H 0.105 0.895 40 H 0.095 0.905 41 H 0.252 0.748 42 H 0.129 0.871 43 H 0.224 0.776 44 H -0.176 1.176 45 H -0.180 1.180 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -8.203 -2.226 -1.425 8.619 hybrid contribution -0.435 -0.255 0.619 0.798 sum -8.638 -2.480 -0.806 9.023 Atomic orbital electron populations 1.20843 0.89905 1.03514 1.03103 1.19800 0.96828 0.92246 1.00857 1.21107 0.92080 0.98268 0.97198 1.20393 0.93964 0.93468 1.09083 1.18079 0.87351 0.83403 0.76406 1.90848 1.13029 1.87241 1.47947 1.45879 1.09974 1.05275 1.76051 1.22453 0.97608 0.80979 0.96769 0.86407 1.23360 1.00453 0.94652 0.99034 1.22823 0.99973 0.94479 0.97253 0.87836 1.21903 0.94179 0.92984 0.91535 1.45570 1.41928 1.18114 1.08485 1.22713 1.08196 1.03600 0.84186 1.22353 1.03342 0.92686 0.99444 1.70315 1.22348 1.29713 0.98918 1.25040 0.98895 0.86208 1.00097 1.23592 1.03340 0.94338 0.97195 1.18243 0.83992 0.89716 0.93724 1.84815 1.14026 1.95869 1.33013 1.20758 0.94091 0.95937 1.04666 1.24947 1.03796 0.98598 0.89621 1.86587 1.36927 1.94133 1.15832 0.94993 0.83494 0.77777 0.85365 1.20988 0.92565 0.97981 0.97475 0.90417 0.90885 0.91137 0.85179 0.76553 0.89778 0.89055 0.88432 0.88878 0.81156 0.81422 0.78022 0.89510 0.90542 0.74831 0.87107 0.77639 1.17566 1.17965 0.84562 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.55 10.00 36.01 0.36 0.91 16 2 C -0.10 0.24 5.87 -104.68 -0.61 -0.37 16 3 C -0.07 0.14 9.18 -39.20 -0.36 -0.22 16 4 C -0.17 -0.14 5.89 -104.84 -0.62 -0.75 16 5 C 0.56 1.13 7.76 -12.47 -0.10 1.04 16 6 O -0.52 -3.08 14.78 -16.60 -0.25 -3.33 16 7 N -0.72 1.15 5.31 -54.06 -0.29 0.86 16 8 C 0.13 -0.23 4.21 -67.12 -0.28 -0.51 16 9 H 0.12 0.07 7.50 -51.93 -0.39 -0.32 16 10 C -0.14 0.61 7.39 -25.92 -0.19 0.42 16 11 C -0.13 0.46 3.96 -89.72 -0.36 0.11 16 12 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 13 C 0.12 -0.46 5.99 -4.05 -0.02 -0.49 16 14 N -0.46 0.27 2.75 -118.58 -0.33 -0.06 16 15 C -0.05 -0.02 11.58 -16.56 -0.19 -0.21 16 16 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 17 N -0.50 -2.23 11.25 -14.66 -0.16 -2.40 16 18 C 0.18 0.22 12.56 -90.38 -1.14 -0.91 16 19 C -0.15 0.36 7.45 -25.83 -0.19 0.17 16 20 C 0.19 0.36 6.69 -38.70 -0.26 0.10 16 21 O -0.47 -1.61 10.91 -40.54 -0.44 -2.05 16 22 C -0.15 0.00 5.27 -104.51 -0.55 -0.55 16 23 C -0.06 0.00 2.37 36.01 0.09 0.09 16 24 O -0.53 -0.65 12.88 -35.23 -0.45 -1.11 16 25 Si 0.68 -1.13 29.91 -169.99 -5.08 -6.21 16 26 C -0.07 0.15 8.30 -39.53 -0.33 -0.18 16 27 H 0.08 -0.40 8.14 -51.93 -0.42 -0.83 16 28 H 0.07 -0.37 8.08 -51.93 -0.42 -0.79 16 29 H 0.07 -0.37 8.08 -51.93 -0.42 -0.79 16 30 H 0.13 -0.65 6.40 -52.48 -0.34 -0.98 16 31 H 0.40 -1.77 6.74 -40.82 -0.28 -2.05 16 32 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 33 H 0.09 -0.55 8.07 -51.93 -0.42 -0.97 16 34 H 0.10 -0.52 8.14 -51.93 -0.42 -0.94 16 35 H 0.09 -0.47 7.85 -51.93 -0.41 -0.87 16 36 H 0.17 -0.36 8.06 -52.48 -0.42 -0.79 16 37 H 0.17 0.17 8.06 -52.48 -0.42 -0.25 16 38 H 0.20 -0.40 8.06 -52.49 -0.42 -0.83 16 39 H 0.09 -0.29 7.90 -51.93 -0.41 -0.70 16 40 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 41 H 0.39 0.03 9.06 45.56 0.41 0.45 16 42 H 0.11 0.05 7.83 -51.93 -0.41 -0.36 16 43 H 0.38 -1.08 8.70 45.56 0.40 -0.69 16 44 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 45 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 46 H 0.14 -0.61 5.10 -52.49 -0.27 -0.88 16 LS Contribution 384.57 15.07 5.80 5.80 Total: 0.00 -12.74 384.57 -11.70 -24.43 By element: Atomic # 1 Polarization: -8.74 SS G_CDS: -5.52 Total: -14.27 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: -4.97 Total: -1.67 kcal Atomic # 7 Polarization: -0.82 SS G_CDS: -0.78 Total: -1.59 kcal Atomic # 8 Polarization: -5.34 SS G_CDS: -1.14 Total: -6.48 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: -5.08 Total: -6.21 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -12.74 -11.70 -24.43 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.786 kcal (2) G-P(sol) polarization free energy of solvation -12.737 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.049 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.697 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.434 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.352 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds