Wall clock time and date at job start Sun Mar 7 2021 01:29:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.46983 * 2 1 4 4 C 1.50691 * 109.47556 * 120.00291 * 2 1 3 5 5 C 1.38242 * 119.97499 * 245.00048 * 4 2 1 6 6 C 1.38294 * 120.11298 * 179.97438 * 5 4 2 7 7 C 1.38119 * 120.05518 * 359.97438 * 6 5 4 8 8 C 1.38758 * 119.94417 * 0.02928 * 7 6 5 9 9 O 1.35901 * 120.05109 * 179.97438 * 8 7 6 10 10 C 1.42900 * 117.00282 * 0.02562 * 9 8 7 11 11 C 1.50706 * 109.46760 * 180.02562 * 10 9 8 12 12 O 1.21281 * 120.00265 * 359.97438 * 11 10 9 13 13 N 1.34778 * 119.99456 * 180.02562 * 11 10 9 14 14 C 1.46501 * 119.99688 * 179.97438 * 13 11 10 15 15 H 1.09006 * 112.90768 * 23.74435 * 14 13 11 16 16 C 1.53778 * 113.61732 * 154.99621 * 14 13 11 17 17 C 1.53781 * 87.08382 * 139.97957 * 16 14 13 18 18 H 1.08995 * 113.61079 * 89.19982 * 17 16 14 19 19 C 1.53001 * 113.61510 * 220.02397 * 17 16 14 20 20 N 1.46499 * 109.47021 * 185.00220 * 19 17 16 21 21 C 1.36879 * 126.39849 * 89.99861 * 20 19 17 22 22 C 1.34675 * 106.81522 * 179.97438 * 21 20 19 23 23 N 1.34124 * 108.02139 * 0.02562 * 22 21 20 24 24 C 1.30503 * 109.25583 * 359.97438 * 23 22 21 25 25 C 1.53782 * 113.61421 * 252.49494 * 14 13 11 26 26 C 1.38172 * 119.97371 * 65.29925 * 4 2 1 27 27 H 0.96706 * 114.00254 * 59.99684 * 1 2 3 28 28 H 1.09006 * 109.46790 * 240.00639 * 2 1 3 29 29 H 1.48497 * 109.99885 * 60.00422 * 3 2 1 30 30 H 1.48504 * 109.99986 * 181.31770 * 3 2 1 31 31 H 1.08000 * 119.94151 * 0.02562 * 5 4 2 32 32 H 1.07998 * 119.96739 * 180.02562 * 6 5 4 33 33 H 1.08002 * 120.03106 * 180.02562 * 7 6 5 34 34 H 1.09001 * 109.47172 * 60.00163 * 10 9 8 35 35 H 1.08996 * 109.47235 * 299.99521 * 10 9 8 36 36 H 0.96998 * 120.00580 * 359.97438 * 13 11 10 37 37 H 1.09008 * 113.60997 * 25.43381 * 16 14 13 38 38 H 1.09001 * 113.69302 * 254.54333 * 16 14 13 39 39 H 1.08996 * 109.47418 * 64.99849 * 19 17 16 40 40 H 1.09002 * 109.46934 * 304.99680 * 19 17 16 41 41 H 1.07999 * 126.59366 * 0.22329 * 21 20 19 42 42 H 1.07993 * 125.98561 * 179.97438 * 22 21 20 43 43 H 1.07997 * 125.64670 * 180.02562 * 24 23 22 44 44 H 1.08998 * 113.61547 * 105.46944 * 25 14 13 45 45 H 1.09006 * 113.61108 * 334.56573 * 25 14 13 46 46 H 1.07999 * 120.02606 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9314 -0.7104 1.2303 5 6 2.6388 -0.0118 2.1908 6 6 3.1008 -0.6608 3.3213 7 6 2.8558 -2.0091 3.4935 8 6 2.1460 -2.7126 2.5309 9 8 1.9042 -4.0395 2.6979 10 6 2.4096 -4.6462 3.8890 11 6 2.0479 -6.1091 3.8998 12 8 1.4189 -6.5852 2.9786 13 7 2.4226 -6.8882 4.9338 14 6 2.0706 -8.3102 4.9447 15 1 1.8917 -8.7107 3.9468 16 6 3.0187 -9.1732 5.7939 17 6 1.7716 -9.9387 6.2667 18 1 1.5120 -10.7852 5.6310 19 6 1.8006 -10.2989 7.7534 20 7 0.6347 -11.1242 8.0787 21 6 0.5669 -12.4903 8.0277 22 6 -0.6798 -12.8329 8.4048 23 7 -1.3548 -11.7066 8.6781 24 6 -0.5737 -10.6791 8.4851 25 6 0.9685 -8.6643 5.9572 26 6 1.6900 -2.0609 1.3946 27 1 -0.3934 0.4418 -0.7651 28 1 1.7923 -0.5138 -0.8901 29 1 1.5615 2.4678 1.2085 30 1 3.5346 1.7703 -0.0321 31 1 2.8303 1.0429 2.0585 32 1 3.6528 -0.1126 4.0704 33 1 3.2164 -2.5154 4.3767 34 1 1.9726 -4.1570 4.7595 35 1 3.4940 -4.5402 3.9188 36 1 2.9253 -6.5074 5.6708 37 1 3.5187 -8.6196 6.5888 38 1 3.7057 -9.7796 5.2037 39 1 1.7773 -9.3863 8.3489 40 1 2.7120 -10.8542 7.9750 41 1 1.3617 -13.1642 7.7439 42 1 -1.0681 -13.8382 8.4741 43 1 -0.8483 -9.6443 8.6272 44 1 -0.0003 -8.8596 5.4975 45 1 0.9080 -7.9717 6.7967 46 1 1.1411 -2.6073 0.6418 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:29:11 Heat of formation + Delta-G solvation = 26.108866 kcal Electronic energy + Delta-G solvation = -28133.239817 eV Core-core repulsion = 23992.429498 eV Total energy + Delta-G solvation = -4140.810320 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.96441 -41.68569 -41.06786 -39.77630 -38.75077 -37.28700 -35.54588 -34.14538 -32.65244 -31.77480 -30.39995 -29.79270 -28.53443 -27.05018 -26.80417 -24.40445 -23.74173 -22.50932 -22.24887 -21.79862 -21.66811 -20.89515 -19.22396 -18.67001 -18.43224 -18.22284 -17.67677 -17.52510 -17.28610 -16.89752 -16.48664 -16.05373 -15.87043 -15.72433 -15.36550 -15.35490 -14.83338 -14.79271 -14.59429 -14.44721 -14.27118 -14.11645 -13.86460 -13.80439 -13.70167 -13.66946 -13.30638 -13.14805 -12.51660 -12.40073 -12.23669 -12.21166 -12.11567 -11.82591 -11.74319 -10.98559 -10.83238 -10.51986 -10.39540 -10.28138 -9.95313 -9.41238 -9.32853 -4.98997 0.13900 0.33649 1.13133 1.21474 1.36506 1.38345 1.62177 1.78576 1.94629 2.33316 2.45403 2.57871 3.05769 3.16104 3.32140 3.36999 3.40472 3.47634 3.66133 3.74863 3.76323 3.81915 3.82705 3.84444 3.90353 3.92776 3.96966 4.09584 4.14154 4.19056 4.31584 4.43755 4.45147 4.48863 4.56076 4.57294 4.64856 4.75942 4.81990 4.90836 4.93483 5.15109 5.26125 5.26912 5.32303 5.38367 5.57076 5.85036 6.13657 6.25361 6.29128 6.60594 6.97787 7.20792 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.075 4.075 3 Si 0.689 3.311 4 C -0.034 4.034 5 C -0.160 4.160 6 C -0.071 4.071 7 C -0.206 4.206 8 C 0.131 3.869 9 O -0.287 6.287 10 C 0.040 3.960 11 C 0.517 3.483 12 O -0.509 6.509 13 N -0.718 5.718 14 C 0.127 3.873 15 H 0.120 0.880 16 C -0.136 4.136 17 C -0.126 4.126 18 H 0.103 0.897 19 C 0.117 3.883 20 N -0.458 5.458 21 C -0.058 4.058 22 C -0.029 4.029 23 N -0.496 5.496 24 C 0.183 3.817 25 C -0.148 4.148 26 C -0.117 4.117 27 H 0.383 0.617 28 H 0.077 0.923 29 H -0.250 1.250 30 H -0.254 1.254 31 H 0.121 0.879 32 H 0.131 0.869 33 H 0.131 0.869 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.403 0.597 37 H 0.092 0.908 38 H 0.083 0.917 39 H 0.095 0.905 40 H 0.095 0.905 41 H 0.173 0.827 42 H 0.169 0.831 43 H 0.201 0.799 44 H 0.078 0.922 45 H 0.089 0.911 46 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.723 3.114 0.775 7.450 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.185 4.185 3 Si 0.590 3.410 4 C -0.035 4.035 5 C -0.178 4.178 6 C -0.089 4.089 7 C -0.225 4.225 8 C 0.085 3.915 9 O -0.199 6.199 10 C -0.039 4.039 11 C 0.302 3.698 12 O -0.382 6.382 13 N -0.372 5.372 14 C 0.022 3.978 15 H 0.137 0.863 16 C -0.175 4.175 17 C -0.145 4.145 18 H 0.122 0.878 19 C -0.006 4.006 20 N -0.141 5.141 21 C -0.191 4.191 22 C -0.177 4.177 23 N -0.214 5.214 24 C -0.099 4.099 25 C -0.187 4.187 26 C -0.136 4.136 27 H 0.231 0.769 28 H 0.095 0.905 29 H -0.175 1.175 30 H -0.179 1.179 31 H 0.138 0.862 32 H 0.149 0.851 33 H 0.149 0.851 34 H 0.113 0.887 35 H 0.113 0.887 36 H 0.238 0.762 37 H 0.111 0.889 38 H 0.102 0.898 39 H 0.114 0.886 40 H 0.114 0.886 41 H 0.191 0.809 42 H 0.186 0.814 43 H 0.218 0.782 44 H 0.097 0.903 45 H 0.108 0.892 46 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 6.030 3.036 1.159 6.850 hybrid contribution 1.356 -0.389 0.565 1.520 sum 7.386 2.647 1.724 8.033 Atomic orbital electron populations 1.86507 1.16932 1.81875 1.49709 1.24742 0.85985 1.10571 0.97237 0.95268 0.80677 0.77831 0.87254 1.19134 0.96706 0.92886 0.94726 1.20833 1.02324 0.99262 0.95354 1.20853 0.97630 0.93714 0.96737 1.21268 1.04821 0.95909 1.00476 1.19004 0.95293 0.82454 0.94718 1.86173 1.73788 1.20011 1.39974 1.22478 1.00683 0.91881 0.88874 1.20086 0.79700 0.87524 0.82514 1.90797 1.37720 1.74637 1.35071 1.45784 1.58490 1.09682 1.23226 1.22490 0.95535 0.79448 1.00292 0.86263 1.23372 0.96479 0.97935 0.99679 1.22790 0.97905 0.98277 0.95577 0.87831 1.21903 0.87317 0.95738 0.95640 1.45564 1.12070 1.06641 1.49853 1.22762 1.01429 0.83821 1.11066 1.22361 0.91554 0.98006 1.05747 1.70322 1.32084 0.98183 1.20763 1.24990 0.81452 1.00247 1.03257 1.23597 0.99186 0.96241 0.99654 1.20258 1.02497 0.93552 0.97245 0.76878 0.90486 1.17504 1.17930 0.86159 0.85087 0.85080 0.88701 0.88714 0.76239 0.88932 0.89816 0.88624 0.88648 0.80945 0.81366 0.78220 0.90347 0.89246 0.84419 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.47 12.81 -35.23 -0.45 -0.92 16 2 C -0.07 -0.04 2.79 36.00 0.10 0.06 16 3 Si 0.69 -0.66 29.85 -169.99 -5.07 -5.74 16 4 C -0.03 -0.10 5.38 -104.65 -0.56 -0.66 16 5 C -0.16 -0.38 8.67 -39.56 -0.34 -0.72 16 6 C -0.07 -0.07 10.04 -39.60 -0.40 -0.47 16 7 C -0.21 -0.15 9.04 -39.43 -0.36 -0.50 16 8 C 0.13 0.38 6.69 -39.22 -0.26 0.12 16 9 O -0.29 -0.98 9.67 -39.34 -0.38 -1.36 16 10 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 11 C 0.52 0.46 7.91 -10.98 -0.09 0.37 16 12 O -0.51 -3.14 16.10 -14.35 -0.23 -3.37 16 13 N -0.72 2.07 5.35 -53.01 -0.28 1.78 16 14 C 0.13 -0.31 4.24 -67.12 -0.28 -0.60 16 15 H 0.12 0.00 7.47 -51.93 -0.39 -0.39 16 16 C -0.14 0.68 7.39 -25.92 -0.19 0.49 16 17 C -0.13 0.50 3.96 -89.81 -0.36 0.15 16 18 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 19 C 0.12 -0.49 5.99 -4.04 -0.02 -0.51 16 20 N -0.46 0.31 2.75 -118.58 -0.33 -0.02 16 21 C -0.06 -0.02 11.58 -16.56 -0.19 -0.21 16 22 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 23 N -0.50 -2.25 11.25 -14.67 -0.17 -2.41 16 24 C 0.18 0.23 12.56 -90.37 -1.14 -0.90 16 25 C -0.15 0.44 7.43 -25.92 -0.19 0.24 16 26 C -0.12 -0.42 9.63 -39.43 -0.38 -0.80 16 27 H 0.38 -1.67 8.74 45.56 0.40 -1.27 16 28 H 0.08 -0.09 7.96 -51.93 -0.41 -0.50 16 29 H -0.25 -0.52 7.05 56.52 0.40 -0.12 16 30 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 31 H 0.12 0.20 4.86 -52.49 -0.26 -0.05 16 32 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 33 H 0.13 -0.32 6.30 -52.49 -0.33 -0.65 16 34 H 0.10 -0.33 7.66 -51.93 -0.40 -0.73 16 35 H 0.10 -0.35 7.66 -51.93 -0.40 -0.75 16 36 H 0.40 -2.53 8.73 -40.82 -0.36 -2.89 16 37 H 0.09 -0.61 8.08 -51.92 -0.42 -1.03 16 38 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 39 H 0.10 -0.53 7.84 -51.93 -0.41 -0.94 16 40 H 0.10 -0.49 8.14 -51.93 -0.42 -0.92 16 41 H 0.17 -0.43 8.06 -52.49 -0.42 -0.85 16 42 H 0.17 0.15 8.06 -52.49 -0.42 -0.28 16 43 H 0.20 -0.34 8.06 -52.49 -0.42 -0.77 16 44 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 45 H 0.09 -0.37 7.90 -51.93 -0.41 -0.78 16 46 H 0.14 0.49 8.06 -52.49 -0.42 0.07 16 LS Contribution 388.38 15.07 5.85 5.85 Total: 0.00 -13.53 388.38 -12.13 -25.66 By element: Atomic # 1 Polarization: -9.01 SS G_CDS: -6.38 Total: -15.40 kcal Atomic # 6 Polarization: 0.61 SS G_CDS: -4.69 Total: -4.08 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: -0.78 Total: -0.65 kcal Atomic # 8 Polarization: -4.59 SS G_CDS: -1.06 Total: -5.65 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: -5.07 Total: -5.74 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -13.53 -12.13 -25.66 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.767 kcal (2) G-P(sol) polarization free energy of solvation -13.528 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.239 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.130 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.658 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.109 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds